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6PIA

Crystal structure of Marinobacter subterrani acetylpolyamine amidohydrolase (msAPAH) complexed with 6-[(3-aminopropyl)amino]-N-hydroxyhexanamide

Functional Information from GO Data
ChainGOidnamespacecontents
A0004407molecular_functionhistone deacetylase activity
A0006338biological_processchromatin remodeling
A0046872molecular_functionmetal ion binding
B0004407molecular_functionhistone deacetylase activity
B0006338biological_processchromatin remodeling
B0046872molecular_functionmetal ion binding
C0004407molecular_functionhistone deacetylase activity
C0006338biological_processchromatin remodeling
C0046872molecular_functionmetal ion binding
D0004407molecular_functionhistone deacetylase activity
D0006338biological_processchromatin remodeling
D0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue ZN A 401
ChainResidue
AASP195
AHIS197
AASP284
AXS6407

site_idAC2
Number of Residues5
Detailsbinding site for residue K A 402
ChainResidue
AASP193
AASP195
AHIS197
ASER216
ALEU217

site_idAC3
Number of Residues6
Detailsbinding site for residue K A 403
ChainResidue
APHE206
AARG209
AVAL212
ATYR243
AHOH523
AHOH562

site_idAC4
Number of Residues6
Detailsbinding site for residue MG A 404
ChainResidue
AASP104
AASP106
AHOH604
AHOH659
BHOH570
BHOH618

site_idAC5
Number of Residues6
Detailsbinding site for residue EDO A 405
ChainResidue
AGLU52
AGLU53
AALA130
AASN133
AHOH626
BHOH530

site_idAC6
Number of Residues6
Detailsbinding site for residue EDO A 406
ChainResidue
ALYS83
ATHR90
AASP106
AHOH501
BASP19
BGLY20

site_idAC7
Number of Residues16
Detailsbinding site for residue XS6 A 407
ChainResidue
AGLU17
ALEU18
AASP19
AASP117
AHIS158
AHIS159
AGLY167
ATYR168
AASP195
AHIS197
APHE225
AASP284
AGLY321
ATYR323
AZN401
BPHE91

site_idAC8
Number of Residues4
Detailsbinding site for residue ZN B 401
ChainResidue
BASP195
BHIS197
BASP284
BXS6406

site_idAC9
Number of Residues5
Detailsbinding site for residue K B 402
ChainResidue
BASP193
BASP195
BHIS197
BSER216
BLEU217

site_idAD1
Number of Residues6
Detailsbinding site for residue K B 403
ChainResidue
BPHE206
BARG209
BVAL212
BTYR243
BHOH517
BHOH540

site_idAD2
Number of Residues6
Detailsbinding site for residue MG B 404
ChainResidue
AHOH570
AHOH654
BASP104
BASP106
BHOH553
BHOH601

site_idAD3
Number of Residues6
Detailsbinding site for residue MG B 405
ChainResidue
BGLU288
BHOH502
BHOH546
BHOH617
BHOH637
BHOH649

site_idAD4
Number of Residues13
Detailsbinding site for residue XS6 B 406
ChainResidue
BGLU17
BLEU18
BASP19
BASP117
BHIS158
BHIS159
BTYR168
BASP195
BHIS197
BASP284
BGLY321
BTYR323
BZN401

site_idAD5
Number of Residues4
Detailsbinding site for residue ZN C 401
ChainResidue
CASP195
CHIS197
CASP284
CXS6406

site_idAD6
Number of Residues6
Detailsbinding site for residue K C 402
ChainResidue
CPHE206
CARG209
CVAL212
CTYR243
CHOH574
CHOH587

site_idAD7
Number of Residues5
Detailsbinding site for residue K C 403
ChainResidue
CASP193
CASP195
CHIS197
CSER216
CLEU217

site_idAD8
Number of Residues6
Detailsbinding site for residue MG C 404
ChainResidue
CASP104
CASP106
CHOH525
CHOH614
DHOH517
DHOH581

site_idAD9
Number of Residues6
Detailsbinding site for residue EDO C 405
ChainResidue
CGLU52
CGLU53
CALA130
CASN133
CHOH594
DHOH559

site_idAE1
Number of Residues13
Detailsbinding site for residue XS6 C 406
ChainResidue
CGLU17
CLEU18
CASP19
CASP117
CHIS158
CHIS159
CTYR168
CASP195
CHIS197
CASP284
CTYR323
CZN401
DPHE91

site_idAE2
Number of Residues4
Detailsbinding site for residue ZN D 401
ChainResidue
DASP195
DHIS197
DASP284
DXS6405

site_idAE3
Number of Residues6
Detailsbinding site for residue K D 402
ChainResidue
DPHE206
DARG209
DVAL212
DTYR243
DHOH545
DHOH627

site_idAE4
Number of Residues5
Detailsbinding site for residue K D 403
ChainResidue
DASP193
DASP195
DHIS197
DSER216
DLEU217

site_idAE5
Number of Residues6
Detailsbinding site for residue MG D 404
ChainResidue
CHOH553
CHOH555
DASP104
DASP106
DHOH582
DHOH587

site_idAE6
Number of Residues16
Detailsbinding site for residue XS6 D 405
ChainResidue
CPHE91
DGLU17
DLEU18
DASP19
DASP117
DHIS158
DHIS159
DGLY167
DTYR168
DASP195
DHIS197
DPHE225
DASP284
DGLY321
DTYR323
DZN401

225946

PDB entries from 2024-10-09

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