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6PI1

Crystal structure of Marinobacter subterrani acetylpolyamine amidohydrolase (msAPAH) complexed with 4-(dimethylamino)-N-[7-hydroxyamino)-7-oxoheptyl]benzamide

Functional Information from GO Data
ChainGOidnamespacecontents
A0004407molecular_functionhistone deacetylase activity
A0006338biological_processchromatin remodeling
A0046872molecular_functionmetal ion binding
B0004407molecular_functionhistone deacetylase activity
B0006338biological_processchromatin remodeling
B0046872molecular_functionmetal ion binding
C0004407molecular_functionhistone deacetylase activity
C0006338biological_processchromatin remodeling
C0046872molecular_functionmetal ion binding
D0004407molecular_functionhistone deacetylase activity
D0006338biological_processchromatin remodeling
D0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue ZN A 401
ChainResidue
AASP195
AHIS197
AASP284
AB3N405

site_idAC2
Number of Residues5
Detailsbinding site for residue K A 402
ChainResidue
AASP193
AASP195
AHIS197
ASER216
ALEU217

site_idAC3
Number of Residues6
Detailsbinding site for residue K A 403
ChainResidue
APHE206
AARG209
AVAL212
ATYR243
AHOH545
AHOH596

site_idAC4
Number of Residues6
Detailsbinding site for residue MG A 404
ChainResidue
AASP104
AASP106
AHOH586
AHOH652
BHOH549
BHOH610

site_idAC5
Number of Residues19
Detailsbinding site for residue B3N A 405
ChainResidue
AASP19
AASP117
AHIS158
AHIS159
AGLY167
ATYR168
AASP195
AHIS197
APHE225
AASP284
APRO290
AILE291
AGLY321
ATYR323
AZN401
AHOH503
AHOH534
AHOH572
BPHE91

site_idAC6
Number of Residues4
Detailsbinding site for residue ZN B 401
ChainResidue
BASP195
BHIS197
BASP284
BB3N406

site_idAC7
Number of Residues5
Detailsbinding site for residue K B 402
ChainResidue
BASP193
BASP195
BHIS197
BSER216
BLEU217

site_idAC8
Number of Residues6
Detailsbinding site for residue K B 403
ChainResidue
BPHE206
BARG209
BVAL212
BTYR243
BHOH512
BHOH558

site_idAC9
Number of Residues6
Detailsbinding site for residue MG B 404
ChainResidue
AHOH579
AHOH646
BASP104
BASP106
BHOH625
BHOH629

site_idAD1
Number of Residues6
Detailsbinding site for residue MG B 405
ChainResidue
BGLU288
BHOH517
BHOH534
BHOH582
BHOH611
BHOH664

site_idAD2
Number of Residues18
Detailsbinding site for residue B3N B 406
ChainResidue
APHE91
BASP19
BASP117
BHIS158
BHIS159
BGLY167
BTYR168
BASP195
BHIS197
BPHE225
BASP284
BILE291
BGLY321
BTYR323
BZN401
BHOH505
BHOH524
BHOH525

site_idAD3
Number of Residues4
Detailsbinding site for residue ZN C 401
ChainResidue
CASP195
CHIS197
CASP284
CB3N405

site_idAD4
Number of Residues5
Detailsbinding site for residue K C 402
ChainResidue
CASP193
CASP195
CHIS197
CSER216
CLEU217

site_idAD5
Number of Residues6
Detailsbinding site for residue K C 403
ChainResidue
CHOH554
CPHE206
CARG209
CVAL212
CTYR243
CHOH546

site_idAD6
Number of Residues6
Detailsbinding site for residue MG C 404
ChainResidue
CASP104
CASP106
CHOH615
CHOH634
DHOH542
DHOH616

site_idAD7
Number of Residues18
Detailsbinding site for residue B3N C 405
ChainResidue
CASP19
CASP117
CHIS158
CHIS159
CGLY167
CTYR168
CASP195
CHIS197
CPHE225
CASP284
CILE291
CGLY321
CTYR323
CZN401
CHOH505
CHOH532
CHOH538
DPHE91

site_idAD8
Number of Residues4
Detailsbinding site for residue ZN D 401
ChainResidue
DASP195
DHIS197
DASP284
DB3N405

site_idAD9
Number of Residues5
Detailsbinding site for residue K D 402
ChainResidue
DASP193
DASP195
DHIS197
DSER216
DLEU217

site_idAE1
Number of Residues6
Detailsbinding site for residue K D 403
ChainResidue
DPHE206
DARG209
DVAL212
DTYR243
DHOH526
DHOH603

site_idAE2
Number of Residues6
Detailsbinding site for residue MG D 404
ChainResidue
CHOH524
CHOH630
DASP104
DASP106
DHOH606
DHOH624

site_idAE3
Number of Residues18
Detailsbinding site for residue B3N D 405
ChainResidue
CPHE91
DASP19
DASP117
DHIS158
DHIS159
DGLY167
DTYR168
DASP195
DHIS197
DPHE225
DASP284
DILE291
DGLY321
DTYR323
DZN401
DHOH502
DHOH512
DHOH599

221051

PDB entries from 2024-06-12

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