6PEU

Structure of YcaO enzyme from Methanocaldococcus jannaschii in complex with peptide

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0005829	cellular_component	cytosol
B	0005829	cellular_component	cytosol
C	0005829	cellular_component	cytosol
D	0005829	cellular_component	cytosol

Functional Information from PDB Data

site_id	AC1
Number of Residues	28
Details	binding site for residue ATP A 500

Chain	Residue
A	ARG11
A	ASN161
A	GLU165
A	HIS169
A	GLU173
A	GLU176
A	ARG177
A	VAL249
A	GLU265
A	MG501
A	MG502
A	LYS68
A	HOH601
A	HOH606
A	HOH655
A	HOH657
A	HOH668
A	HOH697
A	HOH738
A	HOH746
M	HOH501
A	VAL77
A	SER78
A	MET81
A	GLU82
A	GLU85
A	ALA158
A	SER159

---

site_id	AC2
Number of Residues	6
Details	binding site for residue MG A 501

Chain	Residue
A	GLU173
A	ATP500
A	HOH620
A	HOH645
A	HOH690
M	HOH501

---

site_id	AC3
Number of Residues	5
Details	binding site for residue MG A 502

Chain	Residue
A	GLU176
A	VAL249
A	GLU265
A	ATP500
A	HOH657

---

site_id	AC4
Number of Residues	29
Details	binding site for residue ATP B 500

Chain	Residue
B	ARG11
B	THR18
B	LYS68
B	GLN74
B	VAL77
B	SER78
B	MET81
B	GLU82
B	GLU85
B	ALA158
B	SER159
B	ASN161
B	GLU165
B	HIS169
B	GLU173
B	GLU176
B	ARG177
B	VAL249
B	GLU265
B	MG501
B	MG502
B	HOH608
B	HOH615
B	HOH642
B	HOH655
B	HOH664
B	HOH673
B	HOH688
B	HOH757

---

site_id	AC5
Number of Residues	6
Details	binding site for residue MG B 501

Chain	Residue
B	GLU173
B	ATP500
B	HOH634
B	HOH670
B	HOH688
B	HOH740

---

site_id	AC6
Number of Residues	5
Details	binding site for residue MG B 502

Chain	Residue
B	GLU176
B	VAL249
B	GLU265
B	ATP500
B	HOH642

---

site_id	AC7
Number of Residues	29
Details	binding site for residue ATP C 500

Chain	Residue
C	MG501
C	HOH602
C	HOH616
C	HOH642
C	HOH646
C	HOH655
C	HOH661
C	HOH685
P	HOH501
C	ARG11
C	THR18
C	LYS68
C	GLN74
C	VAL77
C	SER78
C	MET81
C	GLU82
C	GLU85
C	ALA158
C	SER159
C	ASN161
C	GLU165
C	HIS169
C	GLU173
C	GLU176
C	ARG177
C	VAL249
C	ARG261
C	GLU265

---

site_id	AC8
Number of Residues	6
Details	binding site for residue MG C 501

Chain	Residue
C	GLU173
C	ATP500
C	HOH624
C	HOH642
C	HOH672
P	HOH501

---

site_id	AC9
Number of Residues	30
Details	binding site for residue ATP D 500

Chain	Residue
D	ARG11
D	THR18
D	LYS68
D	GLN74
D	VAL77
D	SER78
D	MET81
D	GLU82
D	GLU85
D	ALA158
D	SER159
D	ASN161
D	GLU165
D	HIS169
D	GLU173
D	GLU176
D	ARG177
D	VAL249
D	GLU265
D	MG501
D	MG502
D	HOH609
D	HOH616
D	HOH618
D	HOH631
D	HOH638
D	HOH639
D	HOH689
D	HOH695
D	HOH735

---

site_id	AD1
Number of Residues	6
Details	binding site for residue MG D 501

Chain	Residue
D	GLU173
D	ATP500
D	HOH609
D	HOH634
D	HOH638
D	HOH657

---

site_id	AD2
Number of Residues	5
Details	binding site for residue MG D 502

Chain	Residue
D	GLU176
D	VAL249
D	GLU265
D	ATP500
D	HOH631

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	318
Details	Domain: {"description":"YcaO","evidences":[{"source":"PROSITE-ProRule","id":"PRU00999","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	4
Details	Binding site: {"evidences":[{"source":"UniProtKB","id":"P11558","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---