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6PC0

Crystal structure of Helicobacter pylori PPX/GppA

Functional Information from GO Data
ChainGOidnamespacecontents
A0016787molecular_functionhydrolase activity
A0046872molecular_functionmetal ion binding
B0016787molecular_functionhydrolase activity
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues2
Detailsbinding site for residue SO4 A 501
ChainResidue
AARG92
BLYS153

site_idAC2
Number of Residues5
Detailsbinding site for residue SO4 A 502
ChainResidue
ALYS129
AASN196
AHOH648
AHOH703
AHOH722

site_idAC3
Number of Residues6
Detailsbinding site for residue SO4 A 503
ChainResidue
AHIS372
ALYS404
AHOH618
AHOH749
ALEU370
AALA371

site_idAC4
Number of Residues4
Detailsbinding site for residue SO4 A 504
ChainResidue
AARG214
ALYS238
ALYS275
AHOH624

site_idAC5
Number of Residues3
Detailsbinding site for residue SO4 A 505
ChainResidue
ALYS3
ALYS21
BHIS321

site_idAC6
Number of Residues2
Detailsbinding site for residue SO4 A 506
ChainResidue
ALYS329
ALYS354

site_idAC7
Number of Residues3
Detailsbinding site for residue SO4 A 507
ChainResidue
ALYS243
AGLU244
AASP245

site_idAC8
Number of Residues6
Detailsbinding site for residue SO4 A 508
ChainResidue
AGLN25
AASN298
AHIS299
AHOH603
AHOH605
AHOH719

site_idAC9
Number of Residues9
Detailsbinding site for residue SO4 A 509
ChainResidue
AHIS321
AGLU322
ALYS323
AHOH602
AHOH612
AHOH630
AHOH649
BSER421
BLEU422

site_idAD1
Number of Residues9
Detailsbinding site for residue SO4 A 510
ChainResidue
AGLY11
ASER12
AASN13
ASER14
AARG16
AGLY138
AGLY139
AHOH665
AHOH769

site_idAD2
Number of Residues8
Detailsbinding site for residue SO4 A 511
ChainResidue
AARG16
AGLY201
AGLY202
AARG205
AARG287
AMLT515
AHOH627
AHOH637

site_idAD3
Number of Residues3
Detailsbinding site for residue EDO A 512
ChainResidue
AASP111
AGLY112
AGLN113

site_idAD4
Number of Residues5
Detailsbinding site for residue EDO A 513
ChainResidue
AARG98
ALYS101
AALA102
AHOH607
AHOH642

site_idAD5
Number of Residues8
Detailsbinding site for residue MLT A 514
ChainResidue
AHIS321
AHIS324
ASER361
ALYS364
AHOH656
AHOH683
AHOH740
BTYR73

site_idAD6
Number of Residues12
Detailsbinding site for residue MLT A 515
ChainResidue
AASN13
ASER14
AARG16
ALYS35
ALYS37
AGLY202
AARG205
AARG256
ASO4511
AHOH614
AHOH721
AHOH759

site_idAD7
Number of Residues6
Detailsbinding site for residue SO4 B 501
ChainResidue
BLYS348
BTYR349
BHOH603
BHOH621
BHOH653
BHOH718

site_idAD8
Number of Residues5
Detailsbinding site for residue SO4 B 502
ChainResidue
BLEU370
BALA371
BHIS372
BHOH609
BHOH844

site_idAD9
Number of Residues4
Detailsbinding site for residue SO4 B 503
ChainResidue
BHOH816
BLYS243
BGLU244
BARG261

site_idAE1
Number of Residues3
Detailsbinding site for residue SO4 B 504
ChainResidue
AHIS321
BLYS3
BLYS21

site_idAE2
Number of Residues4
Detailsbinding site for residue SO4 B 505
ChainResidue
BLYS405
BPRO407
BLYS408
BHOH611

site_idAE3
Number of Residues2
Detailsbinding site for residue SO4 B 506
ChainResidue
BLYS180
BHOH689

site_idAE4
Number of Residues3
Detailsbinding site for residue SO4 B 507
ChainResidue
BLYS329
BLYS354
BHOH865

site_idAE5
Number of Residues2
Detailsbinding site for residue SO4 B 508
ChainResidue
BLYS330
BLYS334

site_idAE6
Number of Residues9
Detailsbinding site for residue SO4 B 509
ChainResidue
BASN13
BSER14
BARG16
BLYS35
BGLY202
BARG205
BARG256
BHOH657
BHOH813

site_idAE7
Number of Residues11
Detailsbinding site for residue SO4 B 510
ChainResidue
BGLY11
BSER12
BASN13
BSER14
BARG16
BGLY138
BGLY139
BHOH631
BHOH655
BHOH657
BHOH806

site_idAE8
Number of Residues7
Detailsbinding site for residue SO4 B 511
ChainResidue
BARG205
BALA206
BLYS209
BASN253
BARG256
BHOH617
BHOH728

site_idAE9
Number of Residues6
Detailsbinding site for residue EDO B 512
ChainResidue
BLEU470
BLYS475
BLEU479
BTHR480
BILE481
BHOH632

site_idAF1
Number of Residues4
Detailsbinding site for residue EDO B 513
ChainResidue
AGLU94
BGLN113
BILE156
BSER157

site_idAF2
Number of Residues2
Detailsbinding site for residue EDO B 514
ChainResidue
BGLN57
BLYS61

site_idAF3
Number of Residues5
Detailsbinding site for residue EDO B 515
ChainResidue
ALYS3
ALYS76
BLYS452
BASN453
BHOH637

site_idAF4
Number of Residues7
Detailsbinding site for residue EDO B 516
ChainResidue
BILE50
BPRO90
BASN91
BPHE169
BLEU178
BPHE182
BEDO518

site_idAF5
Number of Residues5
Detailsbinding site for residue EDO B 517
ChainResidue
BPHE215
BTYR217
BHOH601
BHOH602
BHOH861

site_idAF6
Number of Residues6
Detailsbinding site for residue EDO B 518
ChainResidue
BLEU93
BPHE169
BLEU174
BEDO516
BHOH675
BHOH726

site_idAF7
Number of Residues6
Detailsbinding site for residue LMR B 519
ChainResidue
BLYS129
BASN130
BSER131
BLYS195
BASN196
BHOH792

site_idAF8
Number of Residues10
Detailsbinding site for residue LMR B 520
ChainResidue
ATYR369
BSER221
BLEU222
BHIS223
BGLY283
BSER384
BARG392
BHOH684
BHOH868
BHOH896

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PDB entries from 2024-07-10

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