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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

6PBE

ZINC17988990-bound TRPV5 in nanodiscs

Functional Information from GO Data
ChainGOidnamespacecontents
A0005216molecular_functionmonoatomic ion channel activity
A0005262molecular_functioncalcium channel activity
A0005516molecular_functioncalmodulin binding
A0005886cellular_componentplasma membrane
A0006811biological_processmonoatomic ion transport
A0006816biological_processcalcium ion transport
A0016020cellular_componentmembrane
A0016324cellular_componentapical plasma membrane
A0034220biological_processmonoatomic ion transmembrane transport
A0035809biological_processregulation of urine volume
A0042802molecular_functionidentical protein binding
A0046872molecular_functionmetal ion binding
A0051289biological_processprotein homotetramerization
A0055074biological_processcalcium ion homeostasis
A0055085biological_processtransmembrane transport
A0070588biological_processcalcium ion transmembrane transport
A0097553biological_processcalcium ion transmembrane import into cytosol
A0098703biological_processcalcium ion import across plasma membrane
B0005216molecular_functionmonoatomic ion channel activity
B0005262molecular_functioncalcium channel activity
B0005516molecular_functioncalmodulin binding
B0005886cellular_componentplasma membrane
B0006811biological_processmonoatomic ion transport
B0006816biological_processcalcium ion transport
B0016020cellular_componentmembrane
B0016324cellular_componentapical plasma membrane
B0034220biological_processmonoatomic ion transmembrane transport
B0035809biological_processregulation of urine volume
B0042802molecular_functionidentical protein binding
B0046872molecular_functionmetal ion binding
B0051289biological_processprotein homotetramerization
B0055074biological_processcalcium ion homeostasis
B0055085biological_processtransmembrane transport
B0070588biological_processcalcium ion transmembrane transport
B0097553biological_processcalcium ion transmembrane import into cytosol
B0098703biological_processcalcium ion import across plasma membrane
C0005216molecular_functionmonoatomic ion channel activity
C0005262molecular_functioncalcium channel activity
C0005516molecular_functioncalmodulin binding
C0005886cellular_componentplasma membrane
C0006811biological_processmonoatomic ion transport
C0006816biological_processcalcium ion transport
C0016020cellular_componentmembrane
C0016324cellular_componentapical plasma membrane
C0034220biological_processmonoatomic ion transmembrane transport
C0035809biological_processregulation of urine volume
C0042802molecular_functionidentical protein binding
C0046872molecular_functionmetal ion binding
C0051289biological_processprotein homotetramerization
C0055074biological_processcalcium ion homeostasis
C0055085biological_processtransmembrane transport
C0070588biological_processcalcium ion transmembrane transport
C0097553biological_processcalcium ion transmembrane import into cytosol
C0098703biological_processcalcium ion import across plasma membrane
D0005216molecular_functionmonoatomic ion channel activity
D0005262molecular_functioncalcium channel activity
D0005516molecular_functioncalmodulin binding
D0005886cellular_componentplasma membrane
D0006811biological_processmonoatomic ion transport
D0006816biological_processcalcium ion transport
D0016020cellular_componentmembrane
D0016324cellular_componentapical plasma membrane
D0034220biological_processmonoatomic ion transmembrane transport
D0035809biological_processregulation of urine volume
D0042802molecular_functionidentical protein binding
D0046872molecular_functionmetal ion binding
D0051289biological_processprotein homotetramerization
D0055074biological_processcalcium ion homeostasis
D0055085biological_processtransmembrane transport
D0070588biological_processcalcium ion transmembrane transport
D0097553biological_processcalcium ion transmembrane import into cytosol
D0098703biological_processcalcium ion import across plasma membrane
Functional Information from PDB Data
site_idAC1
Number of Residues11
Detailsbinding site for residue O6S A 1001
ChainResidue
ALEU402
AMET603
AARG606
AGLU403
AASP406
ATYR415
ALEU421
AHIS426
AILE429
ATYR467
APHE468
site_idAC2
Number of Residues6
Detailsbinding site for residue O6S A 1002
ChainResidue
APHE487
ALEU490
AMET491
ACYS494
ATRP495
CILE565
site_idAC3
Number of Residues11
Detailsbinding site for residue O6S B 1001
ChainResidue
BLEU402
BGLU403
BASP406
BTYR415
BLEU421
BHIS426
BILE429
BTYR467
BPHE468
BMET603
BARG606
site_idAC4
Number of Residues6
Detailsbinding site for residue O6S B 1002
ChainResidue
AILE565
BPHE487
BLEU490
BMET491
BCYS494
BTRP495
site_idAC5
Number of Residues11
Detailsbinding site for residue O6S C 1001
ChainResidue
CLEU402
CGLU403
CASP406
CTYR415
CLEU421
CHIS426
CILE429
CTYR467
CPHE468
CMET603
CARG606
site_idAC6
Number of Residues6
Detailsbinding site for residue O6S C 1002
ChainResidue
CPHE487
CLEU490
CMET491
CCYS494
CTRP495
DILE565
site_idAC7
Number of Residues11
Detailsbinding site for residue O6S D 1001
ChainResidue
DLEU402
DGLU403
DASP406
DTYR415
DLEU421
DHIS426
DILE429
DTYR467
DPHE468
DMET603
DARG606
site_idAC8
Number of Residues6
Detailsbinding site for residue O6S D 1002
ChainResidue
BILE565
DPHE487
DLEU490
DMET491
DCYS494
DTRP495
Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues496
DetailsTransmembrane: {"description":"Helical","evidences":[{"source":"PubMed","id":"29323279","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI2
Number of Residues164
DetailsTopological domain: {"description":"Extracellular","evidences":[{"source":"PubMed","id":"29323279","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI3
Number of Residues128
DetailsTopological domain: {"description":"Cytoplasmic","evidences":[{"source":"PubMed","id":"29323279","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI4
Number of Residues80
DetailsIntramembrane: {"description":"Pore-forming","evidences":[{"source":"PubMed","id":"29323279","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI5
Number of Residues120
DetailsRepeat: {"description":"ANK 1","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI6
Number of Residues116
DetailsRepeat: {"description":"ANK 2","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI7
Number of Residues116
DetailsRepeat: {"description":"ANK 3","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI8
Number of Residues116
DetailsRepeat: {"description":"ANK 4","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI9
Number of Residues116
DetailsRepeat: {"description":"ANK 6","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI10
Number of Residues16
DetailsRegion: {"description":"Interaction with S100A10","evidences":[{"source":"UniProtKB","id":"P69744","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails
site_idSWS_FT_FI11
Number of Residues4
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"29323279","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI12
Number of Residues4
DetailsGlycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

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PDB entries from 2025-12-31

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