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6P99

OXA-48 carbapanemase, ertapenem complex

Functional Information from GO Data
ChainGOidnamespacecontents
A0008658molecular_functionpenicillin binding
A0008800molecular_functionbeta-lactamase activity
A0017001biological_processantibiotic catabolic process
B0008658molecular_functionpenicillin binding
B0008800molecular_functionbeta-lactamase activity
B0017001biological_processantibiotic catabolic process
Functional Information from PDB Data
site_idAC1
Number of Residues13
Detailsbinding site for residue 1RG A 501
ChainResidue
AALA69
ATYR211
AGLY248
AARG250
AHOH615
ASER70
ASER118
AVAL120
AGLY131
AGLU132
ALEU158
ATHR209
AGLY210

site_idAC2
Number of Residues3
Detailsbinding site for residue CL A 502
ChainResidue
ASER70
ALYS73
ATRP157

site_idAC3
Number of Residues2
Detailsbinding site for residue CL A 503
ChainResidue
AARG206
BARG206

site_idAC4
Number of Residues4
Detailsbinding site for residue CA A 504
ChainResidue
AASP143
AGLU147
BASP143
BGLU147

site_idAC5
Number of Residues5
Detailsbinding site for residue CA A 505
ChainResidue
AHIS34
AGLU37
AGLU256
ACD507
AHOH625

site_idAC6
Number of Residues5
Detailsbinding site for residue CD A 506
ChainResidue
AGLU147
AHOH639
BASP143
BGLU147
BHOH421

site_idAC7
Number of Residues6
Detailsbinding site for residue CD A 507
ChainResidue
AGLU37
AHIS38
AGLU125
AGLU256
ACA505
AHOH625

site_idAC8
Number of Residues2
Detailsbinding site for residue CD A 508
ChainResidue
AHIS90
BHIS178

site_idAC9
Number of Residues3
Detailsbinding site for residue CL B 301
ChainResidue
BLYS73
BVAL120
BTRP157

site_idAD1
Number of Residues4
Detailsbinding site for residue CA B 302
ChainResidue
AGLU216
BHIS34
BGLU37
BGLU256

Functional Information from PROSITE/UniProt
site_idPS00337
Number of Residues11
DetailsBETA_LACTAMASE_D Beta-lactamase class-D active site. PaSTFKIPnSL
ChainResidueDetails
APRO68-LEU78

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsActive site: {"description":"Acyl-ester intermediate","evidences":[{"source":"PIRSR","id":"PIRSR602137-50","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"25406838","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"26731698","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"31358584","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"32150407","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"4WMC","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5FAQ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5FAS","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6P97","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6P98","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6P99","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6P9C","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6V1O","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues6
DetailsBinding site: {"evidences":[{"source":"UniProtKB","id":"Q8RLA6","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues2
DetailsBinding site: {"evidences":[{"source":"UniProtKB","id":"P13661","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues2
DetailsModified residue: {"description":"N6-carboxylysine","evidences":[{"source":"PIRSR","id":"PIRSR602137-50","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"19477418","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"25406838","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"3HBR","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4WMC","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

250359

PDB entries from 2026-03-11

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