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6P55

Crystal structure of transpeptidase domain of PBP2 from Neisseria gonorrhoeae acylated by cefixime

Functional Information from GO Data
ChainGOidnamespacecontents
A0008658molecular_functionpenicillin binding
B0008658molecular_functionpenicillin binding
Functional Information from PDB Data
site_idAC1
Number of Residues20
Detailsbinding site for residue NZM A 601
ChainResidue
AGLU307
ATHR498
AGLY499
ATHR500
AALA501
AARG502
ATYR509
AHIS514
AHOH703
AHOH758
AHOH804
ASER310
AHOH815
ATHR347
ASER362
AASN364
APHE420
AGLY421
ATYR422
ALYS497

site_idAC2
Number of Residues6
Detailsbinding site for residue PO4 A 602
ChainResidue
AARG391
AHIS393
AHOH706
AHOH742
BASN406
BARG409

site_idAC3
Number of Residues2
Detailsbinding site for residue PO4 A 603
ChainResidue
ALYS261
AARG298

site_idAC4
Number of Residues3
Detailsbinding site for residue PEG A 604
ChainResidue
APRO343
ATYR422
AARG502

site_idAC5
Number of Residues6
Detailsbinding site for residue PO4 B 602
ChainResidue
AASN406
AARG409
BARG391
BHIS393
BHOH703
BHOH711

site_idAC6
Number of Residues2
Detailsbinding site for residue PEG B 603
ChainResidue
BTYR544
BHOH728

site_idAC7
Number of Residues3
Detailsbinding site for residue PEG B 604
ChainResidue
BTHR347
BTYR350
BGLY481

site_idAC8
Number of Residues20
Detailsbinding site for residue NZM B 601
ChainResidue
BGLU307
BPRO308
BGLY309
BALA311
BILE312
BLYS313
BSER362
BASN364
BPHE420
BGLY421
BTYR422
BLYS497
BTHR498
BGLY499
BTHR500
BALA501
BARG502
BHIS514
BHOH749
BHOH781

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Acyl-ester intermediate => ECO:0000255|HAMAP-Rule:MF_02080
ChainResidueDetails
AGLY324
BGLY324

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PDB entries from 2024-07-17

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