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6P1P

Pre-catalytic ternary complex of human DNA Polymerase Mu with 1-nt gapped substrate containing template 8OG and bound incoming dCMPNPP

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0003887molecular_functionDNA-directed DNA polymerase activity
A0005634cellular_componentnucleus
A0006281biological_processDNA repair
A0016779molecular_functionnucleotidyltransferase activity
A0034061molecular_functionDNA polymerase activity
Functional Information from PDB Data
site_idAC1
Number of Residues27
Detailsbinding site for residue 0KX A 501
ChainResidue
AGLY319
ATRP434
AGLY436
ALYS438
AMG502
AMG503
AEDO506
AHOH640
AHOH712
AHOH715
AHOH720
AGLY320
AHOH730
AHOH745
AHOH753
AHOH772
AHOH788
PDA4
PHOH102
T8OG5
AARG323
ALYS325
AGLY328
AHIS329
AASP330
AASP332
AGLY433

site_idAC2
Number of Residues7
Detailsbinding site for residue MG A 502
ChainResidue
AASP330
AASP332
AASP418
A0KX501
AMG503
PDA4
PHOH102

site_idAC3
Number of Residues5
Detailsbinding site for residue MG A 503
ChainResidue
AASP330
AASP332
A0KX501
AMG502
AHOH712

site_idAC4
Number of Residues6
Detailsbinding site for residue NA A 504
ChainResidue
ATHR241
AILE243
AVAL246
AHOH838
PDT3
PHOH110

site_idAC5
Number of Residues3
Detailsbinding site for residue CL A 505
ChainResidue
AARG445
ASER458
TDA7

site_idAC6
Number of Residues7
Detailsbinding site for residue EDO A 506
ChainResidue
AARG387
AGLY433
ATRP434
AARG445
ASER458
A0KX501
PDA4

site_idAC7
Number of Residues4
Detailsbinding site for residue EDO A 507
ChainResidue
ACYS180
ALYS438
AARG442
AHOH750

site_idAC8
Number of Residues5
Detailsbinding site for residue EPE A 508
ChainResidue
ALEU149
ALYS325
ALEU326
AGLN327
AHOH731

site_idAC9
Number of Residues5
Detailsbinding site for residue EDO A 509
ChainResidue
ATHR154
AGLY155
AGLU476
AHOH782
AHOH884

site_idAD1
Number of Residues4
Detailsbinding site for residue EDO T 101
ChainResidue
TDC4
T8OG5
THOH201
THOH202

Functional Information from PROSITE/UniProt
site_idPS00522
Number of Residues20
DetailsDNA_POLYMERASE_X DNA polymerase family X signature. GGFrRGklqGhDVDFLIthP
ChainResidueDetails
AGLY319-PRO338

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
AASP330
AASP332
AASP418

site_idSWS_FT_FI2
Number of Residues1
DetailsSITE: Responsible for the low discrimination between dNTP and rNTP
ChainResidueDetails
AGLY433

223532

PDB entries from 2024-08-07

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