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6P1O

Post-catalytic nicked complex of human DNA Polymerase Mu with 1-nt gapped substrate containing template 8OG and newly incorporated dAMP

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0003887molecular_functionDNA-directed DNA polymerase activity
A0005634cellular_componentnucleus
A0006281biological_processDNA repair
A0016779molecular_functionnucleotidyltransferase activity
A0034061molecular_functionDNA polymerase activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue MN A 501
ChainResidue
AASP330
AASP332
AASP418
AMG502
PDA4
PDA5

site_idAC2
Number of Residues7
Detailsbinding site for residue MG A 502
ChainResidue
APPV507
AHOH745
PDA5
PATP701
AASP330
AASP332
AMN501

site_idAC3
Number of Residues6
Detailsbinding site for residue NA A 503
ChainResidue
ATHR241
AILE243
AVAL246
AHOH830
PDT3
PHOH812

site_idAC4
Number of Residues2
Detailsbinding site for residue CL A 504
ChainResidue
ASER458
TDA7

site_idAC5
Number of Residues3
Detailsbinding site for residue CL A 505
ChainResidue
ASER172
AGLY174
AARG175

site_idAC6
Number of Residues2
Detailsbinding site for residue CL A 506
ChainResidue
AARG393
AHOH820

site_idAC7
Number of Residues13
Detailsbinding site for residue PPV A 507
ChainResidue
AGLY319
AGLY320
AARG323
AHIS329
AASP330
AASP332
AMG502
AHOH601
AHOH607
AHOH614
AHOH655
PDA5
PATP701

site_idAC8
Number of Residues5
Detailsbinding site for residue EDO A 508
ChainResidue
AARG387
AGLY433
AARG445
PDA4
PDA5

site_idAC9
Number of Residues4
Detailsbinding site for residue EPE A 509
ChainResidue
ALYS325
ALEU326
AGLN327
AHOH612

site_idAD1
Number of Residues12
Detailsbinding site for residue ATP P 701
ChainResidue
AGLY320
AARG323
AHIS329
AASP330
AASP332
AMG502
APPV507
AHOH601
AHOH607
AHOH614
AHOH655
PDA5

Functional Information from PROSITE/UniProt
site_idPS00522
Number of Residues20
DetailsDNA_POLYMERASE_X DNA polymerase family X signature. GGFrRGklqGhDVDFLIthP
ChainResidueDetails
AGLY319-PRO338

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
AASP330
AASP332
AASP418

site_idSWS_FT_FI2
Number of Residues1
DetailsSITE: Responsible for the low discrimination between dNTP and rNTP
ChainResidueDetails
AGLY433

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PDB entries from 2024-06-12

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