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6OZ5

Escherichia coli tRNA synthetase in complex with compound 3

Functional Information from GO Data
ChainGOidnamespacecontents
A0000049molecular_functiontRNA binding
A0000166molecular_functionnucleotide binding
A0000287molecular_functionmagnesium ion binding
A0004812molecular_functionaminoacyl-tRNA ligase activity
A0004826molecular_functionphenylalanine-tRNA ligase activity
A0005515molecular_functionprotein binding
A0005524molecular_functionATP binding
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006412biological_processtranslation
A0006432biological_processphenylalanyl-tRNA aminoacylation
A0009328cellular_componentphenylalanine-tRNA ligase complex
A0043039biological_processtRNA aminoacylation
A0046872molecular_functionmetal ion binding
B0000049molecular_functiontRNA binding
B0000287molecular_functionmagnesium ion binding
B0003723molecular_functionRNA binding
B0004812molecular_functionaminoacyl-tRNA ligase activity
B0004826molecular_functionphenylalanine-tRNA ligase activity
B0005515molecular_functionprotein binding
B0005524molecular_functionATP binding
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0006412biological_processtranslation
B0006432biological_processphenylalanyl-tRNA aminoacylation
B0009328cellular_componentphenylalanine-tRNA ligase complex
B0016020cellular_componentmembrane
B0042802molecular_functionidentical protein binding
B0046872molecular_functionmetal ion binding
C0000049molecular_functiontRNA binding
C0000166molecular_functionnucleotide binding
C0000287molecular_functionmagnesium ion binding
C0004812molecular_functionaminoacyl-tRNA ligase activity
C0004826molecular_functionphenylalanine-tRNA ligase activity
C0005515molecular_functionprotein binding
C0005524molecular_functionATP binding
C0005737cellular_componentcytoplasm
C0005829cellular_componentcytosol
C0006412biological_processtranslation
C0006432biological_processphenylalanyl-tRNA aminoacylation
C0009328cellular_componentphenylalanine-tRNA ligase complex
C0043039biological_processtRNA aminoacylation
C0046872molecular_functionmetal ion binding
D0000049molecular_functiontRNA binding
D0000287molecular_functionmagnesium ion binding
D0003723molecular_functionRNA binding
D0004812molecular_functionaminoacyl-tRNA ligase activity
D0004826molecular_functionphenylalanine-tRNA ligase activity
D0005515molecular_functionprotein binding
D0005524molecular_functionATP binding
D0005737cellular_componentcytoplasm
D0005829cellular_componentcytosol
D0006412biological_processtranslation
D0006432biological_processphenylalanyl-tRNA aminoacylation
D0009328cellular_componentphenylalanine-tRNA ligase complex
D0016020cellular_componentmembrane
D0042802molecular_functionidentical protein binding
D0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues10
Detailsbinding site for residue VB3 A 401
ChainResidue
AGLN169
AGLY296
ASER171
AGLN174
AGLU210
APHE248
APHE250
AGLY271
ACYS272
APHE295

site_idAC2
Number of Residues6
Detailsbinding site for residue MG A 402
ChainResidue
AGLU252
AHOH508
BGLU463
BHOH912
BHOH917
BHOH919

site_idAC3
Number of Residues3
Detailsbinding site for residue EDO B 801
ChainResidue
BARG568
BASP616
BHOH905

site_idAC4
Number of Residues4
Detailsbinding site for residue EDO B 802
ChainResidue
BPRO401
BSER450
BARG452
BPHE453

site_idAC5
Number of Residues6
Detailsbinding site for residue PEG B 803
ChainResidue
BMET1
BILE160
BVAL162
BASP355
BHIS358
BARG359

site_idAC6
Number of Residues4
Detailsbinding site for residue EDO B 804
ChainResidue
BHIS265
BMET313
BGLY315
BGLU334

site_idAC7
Number of Residues11
Detailsbinding site for residue VB3 C 401
ChainResidue
CGLN169
CGLN174
CGLU210
CPHE248
CPHE250
CGLY271
CCYS272
CALA294
CPHE295
CGLY296
CHOH505

site_idAC8
Number of Residues6
Detailsbinding site for residue MG C 402
ChainResidue
CGLU252
CHOH519
DGLU463
DHOH924
DHOH943
DHOH953

site_idAC9
Number of Residues3
Detailsbinding site for residue EDO D 801
ChainResidue
DPHE122
DSER128
DGLU236

site_idAD1
Number of Residues5
Detailsbinding site for residue EDO D 802
ChainResidue
DPRO366
DPRO401
DSER450
DARG452
DPHE453

site_idAD2
Number of Residues6
Detailsbinding site for residue EDO D 803
ChainResidue
DILE304
DGLY314
DGLY315
DGLU334
DHOH901
DHOH908

site_idAD3
Number of Residues6
Detailsbinding site for residue EDO D 804
ChainResidue
DTRP7
DGLU10
DTRP11
DPRO190
DLYS237
DGLU259

site_idAD4
Number of Residues3
Detailsbinding site for residue EDO D 805
ChainResidue
ALYS327
BASN503
DARG497

site_idAD5
Number of Residues5
Detailsbinding site for residue PGE D 806
ChainResidue
DMET1
DSER161
DVAL162
DHIS353
DASP355

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
BASP454
BASP460
BGLU463
BGLU464
DGLU463
DGLU464
DASP454
DASP460

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PDB entries from 2024-06-12

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