6OYH
Crystal structure of MraY bound to carbacaprazamycin
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0005886 | cellular_component | plasma membrane |
A | 0008360 | biological_process | regulation of cell shape |
A | 0008963 | molecular_function | phospho-N-acetylmuramoyl-pentapeptide-transferase activity |
A | 0009252 | biological_process | peptidoglycan biosynthetic process |
A | 0016020 | cellular_component | membrane |
A | 0016740 | molecular_function | transferase activity |
A | 0016780 | molecular_function | phosphotransferase activity, for other substituted phosphate groups |
A | 0042802 | molecular_function | identical protein binding |
A | 0044038 | biological_process | cell wall macromolecule biosynthetic process |
A | 0046872 | molecular_function | metal ion binding |
A | 0051301 | biological_process | cell division |
A | 0051992 | molecular_function | UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase activity |
A | 0071555 | biological_process | cell wall organization |
B | 0005886 | cellular_component | plasma membrane |
B | 0008360 | biological_process | regulation of cell shape |
B | 0008963 | molecular_function | phospho-N-acetylmuramoyl-pentapeptide-transferase activity |
B | 0009252 | biological_process | peptidoglycan biosynthetic process |
B | 0016020 | cellular_component | membrane |
B | 0016740 | molecular_function | transferase activity |
B | 0016780 | molecular_function | phosphotransferase activity, for other substituted phosphate groups |
B | 0042802 | molecular_function | identical protein binding |
B | 0044038 | biological_process | cell wall macromolecule biosynthetic process |
B | 0046872 | molecular_function | metal ion binding |
B | 0051301 | biological_process | cell division |
B | 0051992 | molecular_function | UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase activity |
B | 0071555 | biological_process | cell wall organization |
C | 0005886 | cellular_component | plasma membrane |
C | 0008360 | biological_process | regulation of cell shape |
C | 0008963 | molecular_function | phospho-N-acetylmuramoyl-pentapeptide-transferase activity |
C | 0009252 | biological_process | peptidoglycan biosynthetic process |
C | 0016020 | cellular_component | membrane |
C | 0016740 | molecular_function | transferase activity |
C | 0016780 | molecular_function | phosphotransferase activity, for other substituted phosphate groups |
C | 0042802 | molecular_function | identical protein binding |
C | 0044038 | biological_process | cell wall macromolecule biosynthetic process |
C | 0046872 | molecular_function | metal ion binding |
C | 0051301 | biological_process | cell division |
C | 0051992 | molecular_function | UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase activity |
C | 0071555 | biological_process | cell wall organization |
D | 0005886 | cellular_component | plasma membrane |
D | 0008360 | biological_process | regulation of cell shape |
D | 0008963 | molecular_function | phospho-N-acetylmuramoyl-pentapeptide-transferase activity |
D | 0009252 | biological_process | peptidoglycan biosynthetic process |
D | 0016020 | cellular_component | membrane |
D | 0016740 | molecular_function | transferase activity |
D | 0016780 | molecular_function | phosphotransferase activity, for other substituted phosphate groups |
D | 0042802 | molecular_function | identical protein binding |
D | 0044038 | biological_process | cell wall macromolecule biosynthetic process |
D | 0046872 | molecular_function | metal ion binding |
D | 0051301 | biological_process | cell division |
D | 0051992 | molecular_function | UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase activity |
D | 0071555 | biological_process | cell wall organization |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 15 |
Details | binding site for residue NK4 A 401 |
Chain | Residue |
A | LYS70 |
A | PHE262 |
A | MET263 |
A | GLY264 |
A | SER268 |
A | HIS324 |
A | HIS325 |
A | THR75 |
A | ASN187 |
A | ASN190 |
A | LEU191 |
A | ASP193 |
A | GLY194 |
A | LEU195 |
A | ASP196 |
site_id | AC2 |
Number of Residues | 17 |
Details | binding site for residue NK4 C 401 |
Chain | Residue |
C | LYS70 |
C | THR75 |
C | GLY184 |
C | ASN187 |
C | ASN190 |
C | ASP193 |
C | GLY194 |
C | LEU195 |
C | ASP196 |
C | PHE262 |
C | MET263 |
C | GLY264 |
C | ASP265 |
C | THR299 |
C | PRO322 |
C | HIS324 |
C | HIS325 |
site_id | AC3 |
Number of Residues | 14 |
Details | binding site for residue NK4 B 401 |
Chain | Residue |
B | LYS70 |
B | THR75 |
B | ASP193 |
B | GLY194 |
B | LEU195 |
B | ASP196 |
B | PHE262 |
B | GLY264 |
B | SER268 |
B | THR299 |
B | ARG320 |
B | PRO322 |
B | HIS324 |
B | HIS325 |
site_id | AC4 |
Number of Residues | 16 |
Details | binding site for residue NK4 D 401 |
Chain | Residue |
D | LYS70 |
D | THR75 |
D | PHE180 |
D | ASN190 |
D | ASP193 |
D | GLY194 |
D | LEU195 |
D | ASP196 |
D | ASN255 |
D | PHE262 |
D | MET263 |
D | GLY264 |
D | ASP265 |
D | PRO322 |
D | HIS324 |
D | HIS325 |
Functional Information from PROSITE/UniProt
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 88 |
Details | Transmembrane: {"description":"Helical; Name=Helix 1","evidences":[{"source":"PubMed","id":"23990562","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI2 |
Number of Residues | 68 |
Details | Transmembrane: {"description":"Helical; Name=Helix 2","evidences":[{"source":"PubMed","id":"23990562","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI3 |
Number of Residues | 164 |
Details | Topological domain: {"description":"Periplasmic","evidences":[{"source":"PubMed","id":"23990562","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI4 |
Number of Residues | 84 |
Details | Transmembrane: {"description":"Helical; Name=Helix 3","evidences":[{"source":"PubMed","id":"23990562","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI5 |
Number of Residues | 139 |
Details | Topological domain: {"description":"Cytoplasmic","evidences":[{"source":"PubMed","id":"23990562","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI6 |
Number of Residues | 84 |
Details | Transmembrane: {"description":"Helical; Name=Helix 4","evidences":[{"source":"PubMed","id":"23990562","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI7 |
Number of Residues | 84 |
Details | Transmembrane: {"description":"Helical; Name=Helix 5","evidences":[{"source":"PubMed","id":"23990562","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI8 |
Number of Residues | 80 |
Details | Transmembrane: {"description":"Helical; Name=Helix 6","evidences":[{"source":"PubMed","id":"23990562","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI9 |
Number of Residues | 84 |
Details | Transmembrane: {"description":"Helical; Name=Helix 7","evidences":[{"source":"PubMed","id":"23990562","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI10 |
Number of Residues | 60 |
Details | Transmembrane: {"description":"Helical; Name=Helix 8","evidences":[{"source":"PubMed","id":"23990562","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI11 |
Number of Residues | 100 |
Details | Transmembrane: {"description":"Helical; Name=Helix 9","evidences":[{"source":"PubMed","id":"23990562","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI12 |
Number of Residues | 88 |
Details | Transmembrane: {"description":"Helical; Name=Helix 10","evidences":[{"source":"PubMed","id":"23990562","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI13 |
Number of Residues | 36 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"27088606","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5CKR","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |