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6OVH

Cryo-EM structure of Bimetallic dodecameric cage design 3 (BMC3) from cytochrome cb562

Functional Information from GO Data
ChainGOidnamespacecontents
A0005506molecular_functioniron ion binding
A0009055molecular_functionelectron transfer activity
A0020037molecular_functionheme binding
A0022900biological_processelectron transport chain
A0042597cellular_componentperiplasmic space
A0046872molecular_functionmetal ion binding
B0005506molecular_functioniron ion binding
B0009055molecular_functionelectron transfer activity
B0020037molecular_functionheme binding
B0022900biological_processelectron transport chain
B0042597cellular_componentperiplasmic space
B0046872molecular_functionmetal ion binding
C0005506molecular_functioniron ion binding
C0009055molecular_functionelectron transfer activity
C0020037molecular_functionheme binding
C0022900biological_processelectron transport chain
C0042597cellular_componentperiplasmic space
C0046872molecular_functionmetal ion binding
D0005506molecular_functioniron ion binding
D0009055molecular_functionelectron transfer activity
D0020037molecular_functionheme binding
D0022900biological_processelectron transport chain
D0042597cellular_componentperiplasmic space
D0046872molecular_functionmetal ion binding
E0005506molecular_functioniron ion binding
E0009055molecular_functionelectron transfer activity
E0020037molecular_functionheme binding
E0022900biological_processelectron transport chain
E0042597cellular_componentperiplasmic space
E0046872molecular_functionmetal ion binding
F0005506molecular_functioniron ion binding
F0009055molecular_functionelectron transfer activity
F0020037molecular_functionheme binding
F0022900biological_processelectron transport chain
F0042597cellular_componentperiplasmic space
F0046872molecular_functionmetal ion binding
G0005506molecular_functioniron ion binding
G0009055molecular_functionelectron transfer activity
G0020037molecular_functionheme binding
G0022900biological_processelectron transport chain
G0042597cellular_componentperiplasmic space
G0046872molecular_functionmetal ion binding
H0005506molecular_functioniron ion binding
H0009055molecular_functionelectron transfer activity
H0020037molecular_functionheme binding
H0022900biological_processelectron transport chain
H0042597cellular_componentperiplasmic space
H0046872molecular_functionmetal ion binding
I0005506molecular_functioniron ion binding
I0009055molecular_functionelectron transfer activity
I0020037molecular_functionheme binding
I0022900biological_processelectron transport chain
I0042597cellular_componentperiplasmic space
I0046872molecular_functionmetal ion binding
J0005506molecular_functioniron ion binding
J0009055molecular_functionelectron transfer activity
J0020037molecular_functionheme binding
J0022900biological_processelectron transport chain
J0042597cellular_componentperiplasmic space
J0046872molecular_functionmetal ion binding
K0005506molecular_functioniron ion binding
K0009055molecular_functionelectron transfer activity
K0020037molecular_functionheme binding
K0022900biological_processelectron transport chain
K0042597cellular_componentperiplasmic space
K0046872molecular_functionmetal ion binding
L0005506molecular_functioniron ion binding
L0009055molecular_functionelectron transfer activity
L0020037molecular_functionheme binding
L0022900biological_processelectron transport chain
L0042597cellular_componentperiplasmic space
L0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues7
Detailsbinding site for residue HEC A 201
ChainResidue
AGLU4
AMET7
AHIS8
ACYS98
ACYS101
AHIS102
AARG106

site_idAC2
Number of Residues4
Detailsbinding site for residue HAE A 202
ChainResidue
CHAE203
DHAE202
ACYS63
CFE201

site_idAC3
Number of Residues5
Detailsbinding site for residue HAE A 203
ChainResidue
ACYS82
AFE207
FCYS82
FHAE203
GHAE203

site_idAC4
Number of Residues3
Detailsbinding site for residue ZN A 204
ChainResidue
AALA1
AASP39
CHIS77

site_idAC5
Number of Residues4
Detailsbinding site for residue ZN A 205
ChainResidue
AASP12
AHIS16
BHIS5
BHIS8

site_idAC6
Number of Residues4
Detailsbinding site for residue ZN A 206
ChainResidue
AHIS5
AHIS8
BASP12
BHIS16

site_idAC7
Number of Residues3
Detailsbinding site for residue FE A 207
ChainResidue
AHAE203
FHAE203
GHAE203

site_idAC8
Number of Residues4
Detailsbinding site for residue FE B 204
ChainResidue
BHAE202
FHAE202
JHAE203
JHOH310

site_idAC9
Number of Residues3
Detailsbinding site for residue FE B 205
ChainResidue
BHAE203
CHAE204
IHAE203

site_idAD1
Number of Residues3
Detailsbinding site for residue ZN B 206
ChainResidue
BALA1
BASP39
FHIS77

site_idAD2
Number of Residues4
Detailsbinding site for residue FE C 201
ChainResidue
AHAE202
CHAE203
CHOH308
DHAE202

site_idAD3
Number of Residues3
Detailsbinding site for residue ZN C 205
ChainResidue
CALA1
CASP39
DHIS77

site_idAD4
Number of Residues4
Detailsbinding site for residue ZN C 206
ChainResidue
CHIS5
CHIS8
LASP12
LHIS16

site_idAD5
Number of Residues3
Detailsbinding site for residue FE D 204
ChainResidue
DHAE203
HHAE204
LHAE204

site_idAD6
Number of Residues3
Detailsbinding site for residue ZN D 205
ChainResidue
AHIS77
DALA1
DASP39

site_idAD7
Number of Residues4
Detailsbinding site for residue ZN D 206
ChainResidue
DASP12
DHIS16
GHIS5
GHIS8

site_idAD8
Number of Residues4
Detailsbinding site for residue ZN D 207
ChainResidue
DHIS5
DHIS8
GASP12
GHIS16

site_idAD9
Number of Residues3
Detailsbinding site for residue ZN E 204
ChainResidue
EALA1
EASP39
GHIS77

site_idAE1
Number of Residues4
Detailsbinding site for residue ZN E 205
ChainResidue
EASP12
EHIS16
FHIS5
FHIS8

site_idAE2
Number of Residues4
Detailsbinding site for residue ZN E 206
ChainResidue
EHIS5
EHIS8
FASP12
FHIS16

site_idAE3
Number of Residues3
Detailsbinding site for residue FE E 207
ChainResidue
EHAE203
JHAE204
KHAE204

site_idAE4
Number of Residues3
Detailsbinding site for residue ZN F 204
ChainResidue
FALA1
FASP39
JHIS77

site_idAE5
Number of Residues3
Detailsbinding site for residue ZN G 204
ChainResidue
GALA1
GASP39
HHIS77

site_idAE6
Number of Residues4
Detailsbinding site for residue FE H 201
ChainResidue
EHAE202
GHAE202
GHOH309
HHAE203

site_idAE7
Number of Residues3
Detailsbinding site for residue ZN H 205
ChainResidue
EHIS77
HALA1
HASP39

site_idAE8
Number of Residues4
Detailsbinding site for residue ZN H 206
ChainResidue
HHIS5
HHIS8
KASP12
KHIS16

site_idAE9
Number of Residues4
Detailsbinding site for residue FE I 204
ChainResidue
LHOH308
IHAE202
KHAE203
LHAE203

site_idAF1
Number of Residues3
Detailsbinding site for residue ZN I 205
ChainResidue
IALA1
IASP39
KHIS77

site_idAF2
Number of Residues4
Detailsbinding site for residue ZN I 206
ChainResidue
IHIS5
IHIS8
JASP12
JHIS16

site_idAF3
Number of Residues4
Detailsbinding site for residue ZN J 201
ChainResidue
IASP12
IHIS16
JHIS5
JHIS8

site_idAF4
Number of Residues3
Detailsbinding site for residue ZN J 205
ChainResidue
BHIS77
JALA1
JASP39

site_idAF5
Number of Residues4
Detailsbinding site for residue ZN K 201
ChainResidue
HASP12
HHIS16
KHIS5
KHIS8

site_idAF6
Number of Residues3
Detailsbinding site for residue ZN K 205
ChainResidue
KALA1
KASP39
LHIS77

site_idAF7
Number of Residues4
Detailsbinding site for residue ZN L 201
ChainResidue
CASP12
CHIS16
LHIS5
LHIS8

site_idAF8
Number of Residues3
Detailsbinding site for residue ZN L 205
ChainResidue
IHIS77
LALA1
LASP39

site_idAF9
Number of Residues12
Detailsbinding site for Di-peptide HEC B 201 and CYS B 98
ChainResidue
BGLU4
BMET7
BHIS8
BLEU94
BLYS95
BTHR96
BTHR97
BASN99
BALA100
BCYS101
BHIS102
BARG106

site_idAG1
Number of Residues12
Detailsbinding site for Di-peptide HEC B 201 and CYS B 101
ChainResidue
BGLU4
BMET7
BHIS8
BTHR97
BCYS98
BASN99
BALA100
BHIS102
BGLN103
BLYS104
BTYR105
BARG106

site_idAG2
Number of Residues11
Detailsbinding site for Di-peptide HAE B 202 and CYS B 63
ChainResidue
BSER59
BASP60
BPHE61
BARG62
BGLY64
BPHE65
BTRP66
BGLU67
BFE204
FHAE202
JHAE203

site_idAG3
Number of Residues9
Detailsbinding site for Di-peptide HAE B 203 and CYS B 82
ChainResidue
BALA79
BLYS80
BGLN81
BLYS83
BVAL84
BFE205
CCYS82
CHAE204
IHAE203

site_idAG4
Number of Residues12
Detailsbinding site for Di-peptide HEC C 202 and CYS C 98
ChainResidue
CGLU4
CMET7
CHIS8
CLEU94
CLYS95
CTHR96
CTHR97
CASN99
CALA100
CCYS101
CHIS102
CARG106

site_idAG5
Number of Residues12
Detailsbinding site for Di-peptide HEC C 202 and CYS C 101
ChainResidue
CGLU4
CMET7
CHIS8
CTHR97
CCYS98
CASN99
CALA100
CHIS102
CGLN103
CLYS104
CTYR105
CARG106

site_idAG6
Number of Residues11
Detailsbinding site for Di-peptide HAE C 203 and CYS C 63
ChainResidue
AHAE202
CSER59
CASP60
CPHE61
CARG62
CGLY64
CPHE65
CTRP66
CGLU67
CFE201
DHAE202

site_idAG7
Number of Residues9
Detailsbinding site for Di-peptide HAE C 204 and CYS C 82
ChainResidue
BHAE203
BFE205
CALA79
CLYS80
CGLN81
CLYS83
CVAL84
ICYS82
IHAE203

site_idAG8
Number of Residues12
Detailsbinding site for Di-peptide HEC D 201 and CYS D 98
ChainResidue
DGLU4
DMET7
DHIS8
DLEU94
DLYS95
DTHR96
DTHR97
DASN99
DALA100
DCYS101
DHIS102
DARG106

site_idAG9
Number of Residues12
Detailsbinding site for Di-peptide HEC D 201 and CYS D 101
ChainResidue
DGLU4
DMET7
DHIS8
DTHR97
DCYS98
DASN99
DALA100
DHIS102
DGLN103
DLYS104
DTYR105
DARG106

site_idAH1
Number of Residues11
Detailsbinding site for Di-peptide HAE D 202 and CYS D 63
ChainResidue
AHAE202
CFE201
CHAE203
DSER59
DASP60
DPHE61
DARG62
DGLY64
DPHE65
DTRP66
DGLU67

site_idAH2
Number of Residues9
Detailsbinding site for Di-peptide HAE D 203 and CYS D 82
ChainResidue
DALA79
DLYS80
DGLN81
DLYS83
DVAL84
DFE204
HCYS82
HHAE204
LHAE204

site_idAH3
Number of Residues12
Detailsbinding site for Di-peptide HEC E 201 and CYS E 98
ChainResidue
EGLU4
EMET7
EHIS8
ELEU94
ELYS95
ETHR96
ETHR97
EASN99
EALA100
ECYS101
EHIS102
EARG106

site_idAH4
Number of Residues12
Detailsbinding site for Di-peptide HEC E 201 and CYS E 101
ChainResidue
EGLU4
EMET7
EHIS8
ETHR97
ECYS98
EASN99
EALA100
EHIS102
EGLN103
ELYS104
ETYR105
EARG106

site_idAH5
Number of Residues11
Detailsbinding site for Di-peptide HAE E 202 and CYS E 63
ChainResidue
ESER59
EASP60
EPHE61
EARG62
EGLY64
EPHE65
ETRP66
EGLU67
GHAE202
HFE201
HHAE203

site_idAH6
Number of Residues9
Detailsbinding site for Di-peptide HAE E 203 and CYS E 82
ChainResidue
EALA79
ELYS80
EGLN81
ELYS83
EVAL84
EFE207
JCYS82
JHAE204
KHAE204

site_idAH7
Number of Residues12
Detailsbinding site for Di-peptide HEC F 201 and CYS F 98
ChainResidue
FGLU4
FMET7
FHIS8
FLEU94
FLYS95
FTHR96
FTHR97
FASN99
FALA100
FCYS101
FHIS102
FARG106

site_idAH8
Number of Residues12
Detailsbinding site for Di-peptide HEC F 201 and CYS F 101
ChainResidue
FGLU4
FMET7
FHIS8
FTHR97
FCYS98
FASN99
FALA100
FHIS102
FGLN103
FLYS104
FTYR105
FARG106

site_idAH9
Number of Residues11
Detailsbinding site for Di-peptide HAE F 202 and CYS F 63
ChainResidue
BHAE202
BFE204
FSER59
FASP60
FPHE61
FARG62
FGLY64
FPHE65
FTRP66
FGLU67
JHAE203

site_idAI1
Number of Residues9
Detailsbinding site for Di-peptide HAE F 203 and CYS F 82
ChainResidue
AHAE203
AFE207
FALA79
FLYS80
FGLN81
FLYS83
FVAL84
GCYS82
GHAE203

site_idAI2
Number of Residues12
Detailsbinding site for Di-peptide HEC G 201 and CYS G 101
ChainResidue
GGLU4
GMET7
GHIS8
GTHR97
GCYS98
GASN99
GALA100
GHIS102
GGLN103
GLYS104
GTYR105
GARG106

site_idAI3
Number of Residues12
Detailsbinding site for Di-peptide HEC G 201 and CYS G 98
ChainResidue
GGLU4
GMET7
GHIS8
GLEU94
GLYS95
GTHR96
GTHR97
GASN99
GALA100
GCYS101
GHIS102
GARG106

site_idAI4
Number of Residues11
Detailsbinding site for Di-peptide HAE G 202 and CYS G 63
ChainResidue
EHAE202
GSER59
GASP60
GPHE61
GARG62
GGLY64
GPHE65
GTRP66
GGLU67
HFE201
HHAE203

site_idAI5
Number of Residues9
Detailsbinding site for Di-peptide HAE G 203 and CYS G 82
ChainResidue
ACYS82
AHAE203
AFE207
FHAE203
GALA79
GLYS80
GGLN81
GLYS83
GVAL84

site_idAI6
Number of Residues12
Detailsbinding site for Di-peptide HEC H 202 and CYS H 101
ChainResidue
HGLU4
HMET7
HHIS8
HTHR97
HCYS98
HASN99
HALA100
HHIS102
HGLN103
HLYS104
HTYR105
HARG106

site_idAI7
Number of Residues12
Detailsbinding site for Di-peptide HEC H 202 and CYS H 98
ChainResidue
HGLU4
HMET7
HHIS8
HLEU94
HLYS95
HTHR96
HTHR97
HASN99
HALA100
HCYS101
HHIS102
HARG106

site_idAI8
Number of Residues11
Detailsbinding site for Di-peptide HAE H 203 and CYS H 63
ChainResidue
EHAE202
GHAE202
HSER59
HASP60
HPHE61
HARG62
HGLY64
HPHE65
HTRP66
HGLU67
HFE201

site_idAI9
Number of Residues9
Detailsbinding site for Di-peptide HAE H 204 and CYS H 82
ChainResidue
DHAE203
DFE204
HALA79
HLYS80
HGLN81
HLYS83
HVAL84
LCYS82
LHAE204

site_idAJ1
Number of Residues12
Detailsbinding site for Di-peptide HEC I 201 and CYS I 101
ChainResidue
IGLU4
IMET7
IHIS8
ITHR97
ICYS98
IASN99
IALA100
IHIS102
IGLN103
ILYS104
ITYR105
IARG106

site_idAJ2
Number of Residues12
Detailsbinding site for Di-peptide HEC I 201 and CYS I 98
ChainResidue
IGLU4
IMET7
IHIS8
ILEU94
ILYS95
ITHR96
ITHR97
IASN99
IALA100
ICYS101
IHIS102
IARG106

site_idAJ3
Number of Residues11
Detailsbinding site for Di-peptide HAE I 202 and CYS I 63
ChainResidue
ISER59
IASP60
IPHE61
IARG62
IGLY64
IPHE65
ITRP66
IGLU67
IFE204
KHAE203
LHAE203

site_idAJ4
Number of Residues9
Detailsbinding site for Di-peptide HAE I 203 and CYS I 82
ChainResidue
BCYS82
BHAE203
BFE205
CHAE204
IALA79
ILYS80
IGLN81
ILYS83
IVAL84

site_idAJ5
Number of Residues12
Detailsbinding site for Di-peptide HEC J 202 and CYS J 101
ChainResidue
JGLU4
JMET7
JHIS8
JTHR97
JCYS98
JASN99
JALA100
JHIS102
JGLN103
JLYS104
JTYR105
JARG106

site_idAJ6
Number of Residues12
Detailsbinding site for Di-peptide HEC J 202 and CYS J 98
ChainResidue
JGLU4
JMET7
JHIS8
JLEU94
JLYS95
JTHR96
JTHR97
JASN99
JALA100
JCYS101
JHIS102
JARG106

site_idAJ7
Number of Residues11
Detailsbinding site for Di-peptide HAE J 203 and CYS J 63
ChainResidue
BHAE202
BFE204
FHAE202
JSER59
JASP60
JPHE61
JARG62
JGLY64
JPHE65
JTRP66
JGLU67

site_idAJ8
Number of Residues9
Detailsbinding site for Di-peptide HAE J 204 and CYS J 82
ChainResidue
EHAE203
EFE207
JALA79
JLYS80
JGLN81
JLYS83
JVAL84
KCYS82
KHAE204

site_idAJ9
Number of Residues12
Detailsbinding site for Di-peptide HEC K 202 and CYS K 101
ChainResidue
KGLU4
KMET7
KHIS8
KTHR97
KCYS98
KASN99
KALA100
KHIS102
KGLN103
KLYS104
KTYR105
KARG106

site_idAK1
Number of Residues12
Detailsbinding site for Di-peptide HEC K 202 and CYS K 98
ChainResidue
KGLU4
KMET7
KHIS8
KLEU94
KLYS95
KTHR96
KTHR97
KASN99
KALA100
KCYS101
KHIS102
KARG106

site_idAK2
Number of Residues11
Detailsbinding site for Di-peptide HAE K 203 and CYS K 63
ChainResidue
IHAE202
IFE204
KSER59
KASP60
KPHE61
KARG62
KGLY64
KPHE65
KTRP66
KGLU67
LHAE203

site_idAK3
Number of Residues9
Detailsbinding site for Di-peptide HAE K 204 and CYS K 82
ChainResidue
ECYS82
EHAE203
EFE207
JHAE204
KALA79
KLYS80
KGLN81
KLYS83
KVAL84

site_idAK4
Number of Residues12
Detailsbinding site for Di-peptide HEC L 202 and CYS L 101
ChainResidue
LGLU4
LMET7
LHIS8
LTHR97
LCYS98
LASN99
LALA100
LHIS102
LGLN103
LLYS104
LTYR105
LARG106

site_idAK5
Number of Residues12
Detailsbinding site for Di-peptide HEC L 202 and CYS L 98
ChainResidue
LGLU4
LMET7
LHIS8
LLEU94
LLYS95
LTHR96
LTHR97
LASN99
LALA100
LCYS101
LHIS102
LARG106

site_idAK6
Number of Residues11
Detailsbinding site for Di-peptide HAE L 203 and CYS L 63
ChainResidue
IHAE202
IFE204
KHAE203
LSER59
LASP60
LPHE61
LARG62
LGLY64
LPHE65
LTRP66
LGLU67

site_idAK7
Number of Residues9
Detailsbinding site for Di-peptide HAE L 204 and CYS L 82
ChainResidue
DCYS82
DHAE203
DFE204
HHAE204
LALA79
LLYS80
LGLN81
LLYS83
LVAL84

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues24
DetailsBINDING: axial binding residue
ChainResidueDetails
AMET7
EHIS102
FMET7
FHIS102
GMET7
GHIS102
HMET7
HHIS102
IMET7
IHIS102
JMET7
AHIS102
JHIS102
KMET7
KHIS102
LMET7
LHIS102
BMET7
BHIS102
CMET7
CHIS102
DMET7
DHIS102
EMET7

222926

PDB entries from 2024-07-24

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