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6OHQ

Structure of compound 4 bound human Phospholipase D2 catalytic domain

Functional Information from GO Data
ChainGOidnamespacecontents
A0003824molecular_functioncatalytic activity
A0004630molecular_functionphospholipase D activity
A0006654biological_processphosphatidic acid biosynthetic process
A0035556biological_processintracellular signal transduction
B0003824molecular_functioncatalytic activity
B0004630molecular_functionphospholipase D activity
B0006654biological_processphosphatidic acid biosynthetic process
B0035556biological_processintracellular signal transduction
Functional Information from PDB Data
site_idAC1
Number of Residues15
Detailsbinding site for residue MKA A 1001
ChainResidue
ATRP364
ATRP540
AGLN642
AGLY686
AASN773
ASO41007
AHOH1161
ATRP365
AGLY410
AILE411
AHIS442
AARG464
ALEU514
AASP518
ATRP519

site_idAC2
Number of Residues4
Detailsbinding site for residue SO4 A 1002
ChainResidue
ATRP673
ACYS674
AASN802
AHOH1119

site_idAC3
Number of Residues4
Detailsbinding site for residue SO4 A 1003
ChainResidue
AHIS432
AASP434
AGLN435
ATHR569

site_idAC4
Number of Residues2
Detailsbinding site for residue SO4 A 1004
ChainResidue
AGLY414
AARG431

site_idAC5
Number of Residues4
Detailsbinding site for residue SO4 A 1005
ChainResidue
AARG631
AGLN634
AARG664
ATRP673

site_idAC6
Number of Residues4
Detailsbinding site for residue SO4 A 1006
ChainResidue
ALYS722
ATHR727
ATRP729
AARG730

site_idAC7
Number of Residues3
Detailsbinding site for residue SO4 A 1007
ChainResidue
APHE687
AARG777
AMKA1001

site_idAC8
Number of Residues4
Detailsbinding site for residue SO4 A 1008
ChainResidue
AHIS321
AARG322
APRO329
AHOH1129

site_idAC9
Number of Residues4
Detailsbinding site for residue SO4 A 1009
ChainResidue
ALEU472
ATHR473
AGLY742
AGLU743

site_idAD1
Number of Residues7
Detailsbinding site for residue SO4 A 1010
ChainResidue
APHE504
ALEU507
AGLY508
APHE526
AASP528
AARG532
AHOH1115

site_idAD2
Number of Residues4
Detailsbinding site for residue SO4 A 1011
ChainResidue
AILE735
AHIS905
ALEU908
AHOH1120

site_idAD3
Number of Residues5
Detailsbinding site for residue SO4 A 1012
ChainResidue
ALYS417
AARG431
ALYS570
ALYS572
ATYR573

site_idAD4
Number of Residues7
Detailsbinding site for residue SO4 A 1013
ChainResidue
AGLU369
AVAL370
ATYR371
AARG374
APHE505
ALEU507
AASP510

site_idAD5
Number of Residues16
Detailsbinding site for residue MKA B 1001
ChainResidue
BTRP364
BTRP365
BGLY410
BILE411
BHIS442
BARG464
BLEU514
BASP518
BTRP519
BTRP540
BGLN642
BGLY686
BASN773
BARG777
BASP784
BSO41007

site_idAD6
Number of Residues3
Detailsbinding site for residue SO4 B 1002
ChainResidue
BTRP673
BCYS674
BASN802

site_idAD7
Number of Residues4
Detailsbinding site for residue SO4 B 1003
ChainResidue
BTHR727
BTRP729
BARG730
BHOH1112

site_idAD8
Number of Residues5
Detailsbinding site for residue SO4 B 1004
ChainResidue
BARG471
BLEU472
BTHR473
BGLY742
BGLU743

site_idAD9
Number of Residues2
Detailsbinding site for residue SO4 B 1005
ChainResidue
AARG730
BARG765

site_idAE1
Number of Residues5
Detailsbinding site for residue SO4 B 1006
ChainResidue
BPRO865
BVAL904
BHIS905
BARG739
BALA854

site_idAE2
Number of Residues4
Detailsbinding site for residue SO4 B 1007
ChainResidue
BPHE687
BVAL931
BTRP932
BMKA1001

site_idAE3
Number of Residues3
Detailsbinding site for residue SO4 B 1008
ChainResidue
BLYS388
BARG389
BHOH1105

site_idAE4
Number of Residues4
Detailsbinding site for residue SO4 B 1009
ChainResidue
BHIS321
BARG322
BPRO328
BHOH1142

site_idAE5
Number of Residues4
Detailsbinding site for residue SO4 B 1010
ChainResidue
BTRP729
BILE735
BGLN847
BHIS905

site_idAE6
Number of Residues3
Detailsbinding site for residue SO4 B 1011
ChainResidue
BGLN634
BARG664
BLYS667

site_idAE7
Number of Residues4
Detailsbinding site for residue SO4 B 1012
ChainResidue
BLYS403
BLYS417
BARG431
BTYR573

site_idAE8
Number of Residues3
Detailsbinding site for residue SO4 B 1013
ChainResidue
BMET725
BGLY726
BTHR727

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PDB entries from 2024-06-12

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