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6OD6

Structure of BACE-1 in complex with Ligand 13

Functional Information from GO Data
ChainGOidnamespacecontents
A0004190molecular_functionaspartic-type endopeptidase activity
A0006508biological_processproteolysis
A0016020cellular_componentmembrane
B0004190molecular_functionaspartic-type endopeptidase activity
B0006508biological_processproteolysis
B0016020cellular_componentmembrane
C0004190molecular_functionaspartic-type endopeptidase activity
C0006508biological_processproteolysis
C0016020cellular_componentmembrane
Functional Information from PDB Data
site_idAC1
Number of Residues13
Detailsbinding site for residue M7D A 401
ChainResidue
AGLN12
AGLY230
ATHR231
ATHR232
AALA335
AGLY13
ALEU30
AASP32
ATYR71
APHE108
AILE110
AASP228
ASER229

site_idAC2
Number of Residues14
Detailsbinding site for residue M7D B 401
ChainResidue
BGLY11
BGLN12
BGLY13
BLEU30
BASP32
BGLY34
BTYR71
BPHE108
BASP228
BSER229
BGLY230
BTHR231
BTHR232
BALA335

site_idAC3
Number of Residues3
Detailsbinding site for residue GOL B 402
ChainResidue
BLEU188
BHOH562
BHOH581

site_idAC4
Number of Residues12
Detailsbinding site for residue M7D C 401
ChainResidue
CGLN12
CGLY13
CASP32
CGLY34
CTYR71
CPHE108
CASP228
CSER229
CGLY230
CTHR231
CTHR232
CALA335

Functional Information from PROSITE/UniProt
site_idPS00141
Number of Residues12
DetailsASP_PROTEASE Eukaryotic and viral aspartyl proteases active site. ILVDTGSSNFAV
ChainResidueDetails
AILE29-VAL40

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsActive site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU10094","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues21
DetailsModified residue: {"description":"N6-acetyllysine","evidences":[{"source":"PubMed","id":"17425515","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"19011241","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues9
DetailsGlycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

246333

PDB entries from 2025-12-17

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