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6OD6

Structure of BACE-1 in complex with Ligand 13

Functional Information from GO Data
ChainGOidnamespacecontents
A0004190molecular_functionaspartic-type endopeptidase activity
A0006508biological_processproteolysis
A0016020cellular_componentmembrane
B0004190molecular_functionaspartic-type endopeptidase activity
B0006508biological_processproteolysis
B0016020cellular_componentmembrane
C0004190molecular_functionaspartic-type endopeptidase activity
C0006508biological_processproteolysis
C0016020cellular_componentmembrane
Functional Information from PDB Data
site_idAC1
Number of Residues13
Detailsbinding site for residue M7D A 401
ChainResidue
AGLN12
AGLY230
ATHR231
ATHR232
AALA335
AGLY13
ALEU30
AASP32
ATYR71
APHE108
AILE110
AASP228
ASER229

site_idAC2
Number of Residues14
Detailsbinding site for residue M7D B 401
ChainResidue
BGLY11
BGLN12
BGLY13
BLEU30
BASP32
BGLY34
BTYR71
BPHE108
BASP228
BSER229
BGLY230
BTHR231
BTHR232
BALA335

site_idAC3
Number of Residues3
Detailsbinding site for residue GOL B 402
ChainResidue
BLEU188
BHOH562
BHOH581

site_idAC4
Number of Residues12
Detailsbinding site for residue M7D C 401
ChainResidue
CGLN12
CGLY13
CASP32
CGLY34
CTYR71
CPHE108
CASP228
CSER229
CGLY230
CTHR231
CTHR232
CALA335

Functional Information from PROSITE/UniProt
site_idPS00141
Number of Residues12
DetailsASP_PROTEASE Eukaryotic and viral aspartyl proteases active site. ILVDTGSSNFAV
ChainResidueDetails
AILE29-VAL40

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsACT_SITE: ACT_SITE => ECO:0000255|PROSITE-ProRule:PRU10094
ChainResidueDetails
AASP32
AASP228
BASP32
BASP228
CASP32
CASP228

site_idSWS_FT_FI2
Number of Residues21
DetailsMOD_RES: N6-acetyllysine => ECO:0000269|PubMed:17425515, ECO:0000269|PubMed:19011241
ChainResidueDetails
ALYS65
BLYS218
BLYS224
BLYS238
BLYS239
BLYS246
CLYS65
CLYS214
CLYS218
CLYS224
CLYS238
ALYS214
CLYS239
CLYS246
ALYS218
ALYS224
ALYS238
ALYS239
ALYS246
BLYS65
BLYS214

site_idSWS_FT_FI3
Number of Residues12
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000255
ChainResidueDetails
AASN92
CASN111
CASN162
CASN293
AASN111
AASN162
AASN293
BASN92
BASN111
BASN162
BASN293
CASN92

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PDB entries from 2024-07-17

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