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6OCA

Ricin A chain bound to VHH antibody V2G10

Functional Information from GO Data
ChainGOidnamespacecontents
A0017148biological_processnegative regulation of translation
A0030598molecular_functionrRNA N-glycosylase activity
B0017148biological_processnegative regulation of translation
B0030598molecular_functionrRNA N-glycosylase activity
Functional Information from PDB Data
site_idAC1
Number of Residues3
Detailsbinding site for residue CL A 301
ChainResidue
AARG114
ATHR116
AHOH445

site_idAC2
Number of Residues1
Detailsbinding site for residue CL A 302
ChainResidue
AALA260

site_idAC3
Number of Residues4
Detailsbinding site for residue PG4 A 303
ChainResidue
AARG234
AILE247
AHOH417
AHOH433

site_idAC4
Number of Residues6
Detailsbinding site for residue PG4 A 304
ChainResidue
AGLY186
AGLU187
AARG189
AASN222
AGLN223
AGLN182

site_idAC5
Number of Residues1
Detailsbinding site for residue CL B 301
ChainResidue
BARG193

site_idAC6
Number of Residues3
Detailsbinding site for residue EDO B 302
ChainResidue
BPHE240
BSER241
BSER264

site_idAC7
Number of Residues4
Detailsbinding site for residue EDO D 201
ChainResidue
BSER228
DTHR70
DASP71
DTYR117

Functional Information from PROSITE/UniProt
site_idPS00275
Number of Residues17
DetailsSHIGA_RICIN Shiga/ricin ribosomal inactivating toxins active site signature. IqMIsEAARFQyIEgeM
ChainResidueDetails
AILE172-MET188

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsActive site: {"evidences":[{"source":"UniProtKB","id":"P84531","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues4
DetailsBinding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues18
DetailsBinding site: {}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues6
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"8780513","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1OBT","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues2
DetailsGlycosylation: {"description":"N-linked (GlcNAc...) asparagine","featureId":"CAR_000080","evidences":[{"source":"PubMed","id":"1368517","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues2
DetailsGlycosylation: {"description":"N-linked (GlcNAc...) asparagine; partial","featureId":"CAR_000081","evidences":[{"source":"PubMed","id":"1368517","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

242842

PDB entries from 2025-10-08

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