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6O41

Crystal structure of the unbound PGZL1 germline Fab fragment (PGZL1_gVmDmJ)

Functional Information from GO Data
ChainGOidnamespacecontents
M0005618cellular_componentcell wall
N0005618cellular_componentcell wall
O0005618cellular_componentcell wall
Functional Information from PDB Data
site_idAC1
Number of Residues10
Detailsbinding site for residue GOL L 301
ChainResidue
HPHE174
LTHR178
HPRO175
HSER186
HLEU187
HSER188
LGLN160
LSER162
LSER176
LSER177

site_idAC2
Number of Residues8
Detailsbinding site for residue GOL L 302
ChainResidue
HVAL171
HHIS172
HTHR173
LTHR164
LGLU165
LASP167
LHOH425
LHOH434

site_idAC3
Number of Residues5
Detailsbinding site for residue GOL L 303
ChainResidue
CSER29
CSER30
LTYR32
LTHR93
LSER94

site_idAC4
Number of Residues3
Detailsbinding site for residue GOL L 304
ChainResidue
LASP170
LSER171
LHOH407

site_idAC5
Number of Residues7
Detailsbinding site for residue GOL L 305
ChainResidue
LGLN37
LGLN38
LLYS39
LGLN42
LALA43
LARG45
LHOH401

site_idAC6
Number of Residues7
Detailsbinding site for residue GOL H 301
ChainResidue
HARG38
HGLN39
HALA40
HGLN43
HGLY44
HGLU46
HLYS62

site_idAC7
Number of Residues7
Detailsbinding site for residue GOL H 302
ChainResidue
HGLU150
HPRO151
HVAL152
HPHE174
HPRO175
HALA176
HLEU187

site_idAC8
Number of Residues9
Detailsbinding site for residue GOL A 301
ChainResidue
ASER162
ASER176
ASER177
ATHR178
BPHE174
BPRO175
BSER186
BLEU187
BSER188

site_idAC9
Number of Residues5
Detailsbinding site for residue GOL B 301
ChainResidue
ATHR164
AGLU165
AASP167
BHIS172
BTHR173

site_idAD1
Number of Residues9
Detailsbinding site for residue GOL C 301
ChainResidue
CGLN160
CSER162
CSER176
CTHR178
DPHE174
DPRO175
DSER186
DLEU187
DSER188

site_idAD2
Number of Residues4
Detailsbinding site for residue GOL C 302
ChainResidue
CTYR87
CGLN100
DGLY42
DGLN43

site_idAD3
Number of Residues5
Detailsbinding site for residue GOL D 301
ChainResidue
DLYS117
DGLY118
NTHR21
NTHR22
NTYR38

site_idAD4
Number of Residues5
Detailsbinding site for residue GOL O 101
ChainResidue
BLYS117
BGLY118
OTHR21
OTHR22
OTYR38

Functional Information from PROSITE/UniProt
site_idPS00290
Number of Residues7
DetailsIG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YACEVTH
ChainResidueDetails
LTYR192-HIS198
HTYR206-HIS212

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PDB entries from 2024-10-30

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