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6O3J

Crystal structure of the Fab fragment of the human HIV-1 neutralizing antibody PGZL1 in complex with its MPER peptide epitope (region 671-683 of HIV-1 gp41) and phosphatidic acid (06:0 PA)

Functional Information from PDB Data
site_idAC1
Number of Residues3
Detailsbinding site for residue 44E H 301
ChainResidue
GLYS683
HSER30
HTHR31

site_idAC2
Number of Residues3
Detailsbinding site for residue 44E A 301
ChainResidue
ATHR28
APHE29
ASER30

site_idAC3
Number of Residues6
Detailsbinding site for residue MPD A 302
ChainResidue
HLEU53
HPHE54
HLYS73
ALEU53
APHE54
ALYS73

Functional Information from PROSITE/UniProt
site_idPS00290
Number of Residues7
DetailsIG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YICNVNH
ChainResidueDetails
HTYR206-HIS212
LTYR192-HIS198

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsGlycosylation: {"description":"N-linked (GlcNAc...) asparagine; by host","evidences":[{"source":"HAMAP-Rule","id":"MF_04083","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

246905

PDB entries from 2025-12-31

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