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6NW3

BACE1 in complex with a macrocyclic inhibitor

Functional Information from GO Data
ChainGOidnamespacecontents
A0004190molecular_functionaspartic-type endopeptidase activity
A0006508biological_processproteolysis
A0016020cellular_componentmembrane
B0004190molecular_functionaspartic-type endopeptidase activity
B0006508biological_processproteolysis
B0016020cellular_componentmembrane
C0004190molecular_functionaspartic-type endopeptidase activity
C0006508biological_processproteolysis
C0016020cellular_componentmembrane
Functional Information from PDB Data
site_idAC1
Number of Residues21
Detailsbinding site for residue L4J A 401
ChainResidue
AGLY11
AARG128
ATYR198
ALYS224
AASP228
AGLY230
ATHR231
ATHR232
AASN233
AARG235
ASER325
ALEU30
ATHR329
BASN162
AASP32
AGLY34
APRO70
ATYR71
ATHR72
AGLN73
APHE108

site_idAC2
Number of Residues10
Detailsbinding site for residue SO4 A 402
ChainResidue
ATHR72
AARG235
ASER327
ASER328
ATHR329
AHOH503
AHOH510
BGLN163
BSER164
BHOH503

site_idAC3
Number of Residues3
Detailsbinding site for residue SO4 A 403
ChainResidue
ATHR185
AGLY186
AHOH527

site_idAC4
Number of Residues20
Detailsbinding site for residue L4J B 401
ChainResidue
BGLY11
BGLN12
BLEU30
BASP32
BGLY34
BPRO70
BTYR71
BTHR72
BGLN73
BPHE108
BTYR198
BLYS224
BILE226
BASP228
BGLY230
BTHR231
BTHR232
BASN233
BARG235
BSER325

site_idAC5
Number of Residues5
Detailsbinding site for residue SO4 B 402
ChainResidue
BARG96
BGLU134
BGLN143
BHOH533
BHOH568

site_idAC6
Number of Residues7
Detailsbinding site for residue SO4 B 403
ChainResidue
ATYR68
AARG128
BASP4
BCYS155
BLEU161
BGLY172
BHOH504

site_idAC7
Number of Residues6
Detailsbinding site for residue SO4 B 404
ChainResidue
BTHR72
BARG235
BSER327
BSER328
BTHR329
BHOH517

site_idAC8
Number of Residues17
Detailsbinding site for residue L4J C 401
ChainResidue
CLEU30
CASP32
CGLY34
CPRO70
CTYR71
CTHR72
CGLN73
CPHE108
CTYR198
CLYS224
CASP228
CGLY230
CTHR231
CTHR232
CASN233
CARG235
CSER325

Functional Information from PROSITE/UniProt
site_idPS00141
Number of Residues12
DetailsASP_PROTEASE Eukaryotic and viral aspartyl proteases active site. ILVDTGSSNFAV
ChainResidueDetails
AILE29-VAL40

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsActive site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU10094","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues21
DetailsModified residue: {"description":"N6-acetyllysine","evidences":[{"source":"PubMed","id":"17425515","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"19011241","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues10
DetailsGlycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

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PDB entries from 2026-01-28

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