6NRU
Crystal Structure of the Alpha-ribazole Phosphatase from Shigella flexneri
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003824 | molecular_function | catalytic activity |
A | 0009236 | biological_process | cobalamin biosynthetic process |
A | 0043755 | molecular_function | alpha-ribazole phosphatase activity |
B | 0003824 | molecular_function | catalytic activity |
B | 0009236 | biological_process | cobalamin biosynthetic process |
B | 0043755 | molecular_function | alpha-ribazole phosphatase activity |
C | 0003824 | molecular_function | catalytic activity |
C | 0009236 | biological_process | cobalamin biosynthetic process |
C | 0043755 | molecular_function | alpha-ribazole phosphatase activity |
D | 0003824 | molecular_function | catalytic activity |
D | 0009236 | biological_process | cobalamin biosynthetic process |
D | 0043755 | molecular_function | alpha-ribazole phosphatase activity |
E | 0003824 | molecular_function | catalytic activity |
E | 0009236 | biological_process | cobalamin biosynthetic process |
E | 0043755 | molecular_function | alpha-ribazole phosphatase activity |
F | 0003824 | molecular_function | catalytic activity |
F | 0009236 | biological_process | cobalamin biosynthetic process |
F | 0043755 | molecular_function | alpha-ribazole phosphatase activity |
G | 0003824 | molecular_function | catalytic activity |
G | 0009236 | biological_process | cobalamin biosynthetic process |
G | 0043755 | molecular_function | alpha-ribazole phosphatase activity |
H | 0003824 | molecular_function | catalytic activity |
H | 0009236 | biological_process | cobalamin biosynthetic process |
H | 0043755 | molecular_function | alpha-ribazole phosphatase activity |
I | 0003824 | molecular_function | catalytic activity |
I | 0009236 | biological_process | cobalamin biosynthetic process |
I | 0043755 | molecular_function | alpha-ribazole phosphatase activity |
J | 0003824 | molecular_function | catalytic activity |
J | 0009236 | biological_process | cobalamin biosynthetic process |
J | 0043755 | molecular_function | alpha-ribazole phosphatase activity |
K | 0003824 | molecular_function | catalytic activity |
K | 0009236 | biological_process | cobalamin biosynthetic process |
K | 0043755 | molecular_function | alpha-ribazole phosphatase activity |
L | 0003824 | molecular_function | catalytic activity |
L | 0009236 | biological_process | cobalamin biosynthetic process |
L | 0043755 | molecular_function | alpha-ribazole phosphatase activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 3 |
Details | binding site for residue SO4 A 301 |
Chain | Residue |
A | ARG30 |
A | GLN34 |
A | ARG196 |
site_id | AC2 |
Number of Residues | 7 |
Details | binding site for residue SO4 A 302 |
Chain | Residue |
A | HOH417 |
A | ARG7 |
A | HIS8 |
A | ASN14 |
A | ARG57 |
A | GLU81 |
A | HOH407 |
site_id | AC3 |
Number of Residues | 3 |
Details | binding site for residue PG4 A 303 |
Chain | Residue |
A | TYR19 |
A | TRP106 |
B | PHE187 |
site_id | AC4 |
Number of Residues | 2 |
Details | binding site for residue PEG A 304 |
Chain | Residue |
A | GLU81 |
A | TRP169 |
site_id | AC5 |
Number of Residues | 1 |
Details | binding site for residue EDO A 305 |
Chain | Residue |
A | ARG159 |
site_id | AC6 |
Number of Residues | 3 |
Details | binding site for residue SO4 B 301 |
Chain | Residue |
B | ARG30 |
B | GLN34 |
B | ARG196 |
site_id | AC7 |
Number of Residues | 7 |
Details | binding site for residue SO4 B 302 |
Chain | Residue |
B | ARG7 |
B | HIS8 |
B | ASN14 |
B | SER20 |
B | HOH405 |
B | HOH407 |
B | HOH423 |
site_id | AC8 |
Number of Residues | 3 |
Details | binding site for residue SO4 C 301 |
Chain | Residue |
C | ARG30 |
C | GLN34 |
C | ARG196 |
site_id | AC9 |
Number of Residues | 7 |
Details | binding site for residue SO4 C 302 |
Chain | Residue |
C | ARG7 |
C | ASN14 |
C | SER20 |
C | HOH406 |
C | HOH408 |
C | HOH414 |
C | HOH440 |
site_id | AD1 |
Number of Residues | 4 |
Details | binding site for residue GOL C 303 |
Chain | Residue |
C | GLU81 |
C | PHE124 |
C | GLY151 |
C | TRP169 |
site_id | AD2 |
Number of Residues | 3 |
Details | binding site for residue GOL C 304 |
Chain | Residue |
C | ARG7 |
C | ARG172 |
C | HOH420 |
site_id | AD3 |
Number of Residues | 4 |
Details | binding site for residue PG4 C 305 |
Chain | Residue |
C | TRP106 |
C | CYS107 |
C | TRP110 |
C | HOH415 |
site_id | AD4 |
Number of Residues | 3 |
Details | binding site for residue SO4 D 301 |
Chain | Residue |
D | ARG30 |
D | GLN34 |
D | ARG196 |
site_id | AD5 |
Number of Residues | 4 |
Details | binding site for residue SO4 D 302 |
Chain | Residue |
D | ARG7 |
D | HIS8 |
D | ASN14 |
D | GLU81 |
site_id | AD6 |
Number of Residues | 3 |
Details | binding site for residue CL D 303 |
Chain | Residue |
D | PRO24 |
D | THR25 |
D | ARG57 |
site_id | AD7 |
Number of Residues | 3 |
Details | binding site for residue SO4 E 301 |
Chain | Residue |
E | ARG30 |
E | GLN34 |
E | ARG196 |
site_id | AD8 |
Number of Residues | 9 |
Details | binding site for residue SO4 E 302 |
Chain | Residue |
E | ARG7 |
E | HIS8 |
E | THR11 |
E | ASN14 |
E | ARG57 |
E | GLU81 |
E | GLN175 |
E | HOH402 |
E | HOH408 |
site_id | AD9 |
Number of Residues | 2 |
Details | binding site for residue PEG E 303 |
Chain | Residue |
E | ARG159 |
E | GLY162 |
site_id | AE1 |
Number of Residues | 4 |
Details | binding site for residue SO4 F 301 |
Chain | Residue |
F | ARG30 |
F | GLN34 |
F | ARG196 |
F | HOH456 |
site_id | AE2 |
Number of Residues | 6 |
Details | binding site for residue SO4 F 302 |
Chain | Residue |
F | ARG7 |
F | HIS8 |
F | ASN14 |
F | GLN175 |
F | HOH414 |
F | HOH448 |
site_id | AE3 |
Number of Residues | 4 |
Details | binding site for residue CL F 303 |
Chain | Residue |
F | PRO24 |
F | THR25 |
F | GLU56 |
F | ARG57 |
site_id | AE4 |
Number of Residues | 6 |
Details | binding site for residue PEG F 304 |
Chain | Residue |
F | GLU81 |
F | PHE84 |
F | TRP106 |
F | TRP169 |
F | PEG305 |
F | HOH413 |
site_id | AE5 |
Number of Residues | 4 |
Details | binding site for residue PEG F 305 |
Chain | Residue |
F | TYR19 |
F | TRP106 |
F | PEG304 |
F | HOH447 |
site_id | AE6 |
Number of Residues | 3 |
Details | binding site for residue EDO F 306 |
Chain | Residue |
F | HIS91 |
F | ARG93 |
F | HOH416 |
site_id | AE7 |
Number of Residues | 2 |
Details | binding site for residue EDO F 307 |
Chain | Residue |
F | GLY162 |
F | ARG159 |
site_id | AE8 |
Number of Residues | 3 |
Details | binding site for residue SO4 G 301 |
Chain | Residue |
G | ARG30 |
G | GLN34 |
G | ARG196 |
site_id | AE9 |
Number of Residues | 4 |
Details | binding site for residue SO4 G 302 |
Chain | Residue |
G | ARG7 |
G | HIS8 |
G | ASN14 |
G | SER20 |
site_id | AF1 |
Number of Residues | 5 |
Details | binding site for residue PEG G 303 |
Chain | Residue |
G | MSE82 |
G | TRP106 |
G | TRP110 |
G | GLY151 |
G | TRP169 |
site_id | AF2 |
Number of Residues | 2 |
Details | binding site for residue GOL G 304 |
Chain | Residue |
G | ARG159 |
G | GLY162 |
site_id | AF3 |
Number of Residues | 3 |
Details | binding site for residue SO4 H 301 |
Chain | Residue |
H | ARG30 |
H | GLN34 |
H | ARG196 |
site_id | AF4 |
Number of Residues | 6 |
Details | binding site for residue SO4 H 302 |
Chain | Residue |
H | ARG7 |
H | HIS8 |
H | ASN14 |
H | GLU81 |
H | HOH402 |
H | HOH408 |
site_id | AF5 |
Number of Residues | 4 |
Details | binding site for residue PEG H 303 |
Chain | Residue |
H | GLU81 |
H | MSE82 |
H | GLY151 |
H | TRP169 |
site_id | AF6 |
Number of Residues | 4 |
Details | binding site for residue EDO H 304 |
Chain | Residue |
H | GLN59 |
H | ARG63 |
H | VAL73 |
H | ILE75 |
site_id | AF7 |
Number of Residues | 3 |
Details | binding site for residue SO4 I 301 |
Chain | Residue |
I | ARG30 |
I | GLN34 |
I | ARG196 |
site_id | AF8 |
Number of Residues | 7 |
Details | binding site for residue SO4 I 302 |
Chain | Residue |
I | ARG7 |
I | HIS8 |
I | ASN14 |
I | SER20 |
I | GLU81 |
I | HOH401 |
I | HOH421 |
site_id | AF9 |
Number of Residues | 4 |
Details | binding site for residue CL I 303 |
Chain | Residue |
I | PRO24 |
I | THR25 |
I | GLU56 |
I | ARG57 |
site_id | AG1 |
Number of Residues | 2 |
Details | binding site for residue GOL I 304 |
Chain | Residue |
I | ARG7 |
I | GLN150 |
site_id | AG2 |
Number of Residues | 1 |
Details | binding site for residue EDO I 305 |
Chain | Residue |
I | GLN185 |
site_id | AG3 |
Number of Residues | 4 |
Details | binding site for residue SO4 J 301 |
Chain | Residue |
J | ARG30 |
J | GLN34 |
J | ARG196 |
J | HOH431 |
site_id | AG4 |
Number of Residues | 7 |
Details | binding site for residue SO4 J 302 |
Chain | Residue |
J | ARG7 |
J | HIS8 |
J | ASN14 |
J | HOH403 |
J | HOH410 |
J | HOH418 |
J | HOH419 |
site_id | AG5 |
Number of Residues | 4 |
Details | binding site for residue CL J 303 |
Chain | Residue |
J | PRO24 |
J | THR25 |
J | GLU56 |
J | ARG57 |
site_id | AG6 |
Number of Residues | 1 |
Details | binding site for residue EDO J 304 |
Chain | Residue |
J | ARG159 |
site_id | AG7 |
Number of Residues | 3 |
Details | binding site for residue SO4 K 301 |
Chain | Residue |
K | ARG30 |
K | GLN34 |
K | ARG196 |
site_id | AG8 |
Number of Residues | 8 |
Details | binding site for residue SO4 K 302 |
Chain | Residue |
K | ARG7 |
K | ASN14 |
K | SER20 |
K | ARG57 |
K | GLU81 |
K | HOH401 |
K | HOH425 |
K | HOH429 |
site_id | AG9 |
Number of Residues | 3 |
Details | binding site for residue CL K 303 |
Chain | Residue |
K | PRO24 |
K | THR25 |
K | ARG57 |
site_id | AH1 |
Number of Residues | 4 |
Details | binding site for residue SO4 L 301 |
Chain | Residue |
L | ARG30 |
L | GLN34 |
L | ARG196 |
L | HOH405 |
site_id | AH2 |
Number of Residues | 4 |
Details | binding site for residue SO4 L 302 |
Chain | Residue |
L | ARG7 |
L | HIS8 |
L | ASN14 |
L | SER20 |
site_id | AH3 |
Number of Residues | 3 |
Details | binding site for residue CL L 303 |
Chain | Residue |
L | PRO24 |
L | THR25 |
L | ARG57 |
site_id | AH4 |
Number of Residues | 6 |
Details | binding site for residue PEG L 304 |
Chain | Residue |
L | GLU81 |
L | MSE82 |
L | TRP106 |
L | TRP169 |
L | PEG305 |
L | HOH419 |
site_id | AH5 |
Number of Residues | 4 |
Details | binding site for residue PEG L 305 |
Chain | Residue |
L | TYR19 |
L | TRP106 |
L | TRP110 |
L | PEG304 |
site_id | AH6 |
Number of Residues | 4 |
Details | binding site for residue PEG L 306 |
Chain | Residue |
L | ASP16 |
L | GLY17 |
L | HIS91 |
L | ARG93 |
Functional Information from PROSITE/UniProt
site_id | PS00175 |
Number of Residues | 10 |
Details | PG_MUTASE Phosphoglycerate mutase family phosphohistidine signature. LiRHGEtQaN |
Chain | Residue | Details |
A | LEU5-ASN14 |