6NPI
Crystal structure of Epstein-Barr Virus Nuclear Antigen-1, EBNA1, bound to fragments
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003677 | molecular_function | DNA binding |
A | 0003700 | molecular_function | DNA-binding transcription factor activity |
A | 0006275 | biological_process | regulation of DNA replication |
A | 0006355 | biological_process | regulation of DNA-templated transcription |
A | 0042025 | cellular_component | host cell nucleus |
A | 0045893 | biological_process | positive regulation of DNA-templated transcription |
B | 0003677 | molecular_function | DNA binding |
B | 0003700 | molecular_function | DNA-binding transcription factor activity |
B | 0006275 | biological_process | regulation of DNA replication |
B | 0006355 | biological_process | regulation of DNA-templated transcription |
B | 0042025 | cellular_component | host cell nucleus |
B | 0045893 | biological_process | positive regulation of DNA-templated transcription |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 5 |
Details | binding site for residue 60Q B 701 |
Chain | Residue |
B | LYS477 |
B | SER516 |
B | ASN519 |
B | THR590 |
B | HOH827 |
site_id | AC2 |
Number of Residues | 10 |
Details | binding site for residue KW1 B 702 |
Chain | Residue |
A | ILE570 |
B | LYS514 |
B | ARG521 |
B | PRO535 |
B | LEU536 |
B | HOH853 |
A | GLU495 |
A | GLU556 |
A | THR568 |
A | HIS569 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 2 |
Details | ACT_SITE: For site-specific DNA endonuclease activity => ECO:0000269|PubMed:33482082 |
Chain | Residue | Details |
A | TYR518 | |
B | TYR518 |
site_id | SWS_FT_FI2 |
Number of Residues | 2 |
Details | BINDING: covalent => ECO:0000269|PubMed:33482082 |
Chain | Residue | Details |
A | TYR518 | |
B | TYR518 |
site_id | SWS_FT_FI3 |
Number of Residues | 2 |
Details | SITE: Interaction dimer-dimer => ECO:0000269|PubMed:31142669 |
Chain | Residue | Details |
A | ARG491 | |
B | ARG491 |
site_id | SWS_FT_FI4 |
Number of Residues | 2 |
Details | SITE: Interaction dimer-dimer. Required for episome maintenance and generation of immortalized B cells in the host => ECO:0000269|PubMed:31142669, ECO:0000269|PubMed:33482082 |
Chain | Residue | Details |
A | TYR518 | |
B | TYR518 |