6NPD
X-ray crystal structure of TmpA, 2-trimethylaminoethylphosphonate hydroxylase, with Fe, 2OG, and (R)-1-hydroxy-2-trimethylaminoethylphosphonate
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0005506 | molecular_function | iron ion binding |
| A | 0008336 | molecular_function | gamma-butyrobetaine dioxygenase activity |
| A | 0016491 | molecular_function | oxidoreductase activity |
| A | 0016706 | molecular_function | 2-oxoglutarate-dependent dioxygenase activity |
| A | 0045329 | biological_process | carnitine biosynthetic process |
| A | 0046872 | molecular_function | metal ion binding |
| A | 0051213 | molecular_function | dioxygenase activity |
| B | 0005506 | molecular_function | iron ion binding |
| B | 0008336 | molecular_function | gamma-butyrobetaine dioxygenase activity |
| B | 0016491 | molecular_function | oxidoreductase activity |
| B | 0016706 | molecular_function | 2-oxoglutarate-dependent dioxygenase activity |
| B | 0045329 | biological_process | carnitine biosynthetic process |
| B | 0046872 | molecular_function | metal ion binding |
| B | 0051213 | molecular_function | dioxygenase activity |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 4 |
| Details | binding site for residue FE2 A 401 |
| Chain | Residue |
| A | HIS198 |
| A | ASP200 |
| A | HIS341 |
| A | KVP402 |
| site_id | AC2 |
| Number of Residues | 13 |
| Details | binding site for residue KVP A 402 |
| Chain | Residue |
| A | ASP200 |
| A | ASN201 |
| A | TYR203 |
| A | ASN286 |
| A | ARG288 |
| A | TYR358 |
| A | FE2401 |
| A | HOH647 |
| A | TYR173 |
| A | PHE177 |
| A | ASN187 |
| A | TYR190 |
| A | HIS198 |
| site_id | AC3 |
| Number of Residues | 3 |
| Details | binding site for residue FE2 B 401 |
| Chain | Residue |
| B | HIS198 |
| B | ASP200 |
| B | HIS341 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 10 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:30789718, ECO:0007744|PDB:6NPC, ECO:0007744|PDB:6NPD |
| Chain | Residue | Details |
| A | ASN187 | |
| B | ARG288 | |
| A | ASN201 | |
| A | TYR203 | |
| A | ASN286 | |
| A | ARG288 | |
| B | ASN187 | |
| B | ASN201 | |
| B | TYR203 | |
| B | ASN286 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 6 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:30789718, ECO:0007744|PDB:6NPB, ECO:0007744|PDB:6NPC, ECO:0007744|PDB:6NPD |
| Chain | Residue | Details |
| A | HIS198 | |
| A | ASP200 | |
| A | HIS341 | |
| B | HIS198 | |
| B | ASP200 | |
| B | HIS341 |
| site_id | SWS_FT_FI3 |
| Number of Residues | 4 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:30789718, ECO:0007744|PDB:6NPB, ECO:0007744|PDB:6NPC |
| Chain | Residue | Details |
| A | ARG343 | |
| A | ARG352 | |
| B | ARG343 | |
| B | ARG352 |
