6NOP
Structure of Cyanothece McdA(D38A)-ATP complex
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000166 | molecular_function | nucleotide binding |
| A | 0003677 | molecular_function | DNA binding |
| A | 0005524 | molecular_function | ATP binding |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0009295 | cellular_component | nucleoid |
| A | 0015977 | biological_process | carbon fixation |
| A | 0016787 | molecular_function | hydrolase activity |
| B | 0000166 | molecular_function | nucleotide binding |
| B | 0003677 | molecular_function | DNA binding |
| B | 0005524 | molecular_function | ATP binding |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0009295 | cellular_component | nucleoid |
| B | 0015977 | biological_process | carbon fixation |
| B | 0016787 | molecular_function | hydrolase activity |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 25 |
| Details | binding site for residue ATP B 501 |
| Chain | Residue |
| A | GLY11 |
| B | THR16 |
| B | THR17 |
| B | GLN40 |
| B | PRO126 |
| B | PHE182 |
| B | ILE215 |
| B | LEU216 |
| B | GLU217 |
| B | SER218 |
| B | TYR221 |
| A | GLU147 |
| B | LYS222 |
| B | MG502 |
| B | HOH613 |
| B | HOH617 |
| B | HOH640 |
| B | HOH684 |
| A | LYS151 |
| A | ARG183 |
| B | GLY11 |
| B | GLY12 |
| B | GLN13 |
| B | GLY14 |
| B | LYS15 |
| site_id | AC2 |
| Number of Residues | 5 |
| Details | binding site for residue MG B 502 |
| Chain | Residue |
| B | THR16 |
| B | ATP501 |
| B | HOH613 |
| B | HOH617 |
| B | HOH702 |
| site_id | AC3 |
| Number of Residues | 27 |
| Details | binding site for residue ATP A 301 |
| Chain | Residue |
| A | GLY11 |
| A | GLY12 |
| A | GLN13 |
| A | GLY14 |
| A | LYS15 |
| A | THR16 |
| A | THR17 |
| A | GLN40 |
| A | PRO126 |
| A | PHE182 |
| A | ARG183 |
| A | ILE215 |
| A | LEU216 |
| A | GLU217 |
| A | SER218 |
| A | TYR221 |
| A | LYS222 |
| A | MG302 |
| A | HOH417 |
| A | HOH428 |
| A | HOH444 |
| A | HOH469 |
| A | HOH470 |
| B | GLY11 |
| B | GLU147 |
| B | LYS151 |
| B | ARG183 |
| site_id | AC4 |
| Number of Residues | 5 |
| Details | binding site for residue MG A 302 |
| Chain | Residue |
| A | THR16 |
| A | ATP301 |
| A | HOH417 |
| A | HOH428 |
| A | HOH480 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 4 |
| Details | BINDING: BINDING => ECO:0007744|PDB:6NOP |
| Chain | Residue | Details |
| B | GLY11 | |
| B | GLN40 | |
| A | GLY11 | |
| A | GLN40 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 16 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:31106331, ECO:0007744|PDB:6NON, ECO:0007744|PDB:6NOO, ECO:0007744|PDB:6NOP |
| Chain | Residue | Details |
| B | GLY12 | |
| A | GLN13 | |
| A | GLY14 | |
| A | LYS15 | |
| A | THR16 | |
| A | THR17 | |
| A | LEU216 | |
| A | SER218 | |
| B | GLN13 | |
| B | GLY14 | |
| B | LYS15 | |
| B | THR16 | |
| B | THR17 | |
| B | LEU216 | |
| B | SER218 | |
| A | GLY12 |
| site_id | SWS_FT_FI3 |
| Number of Residues | 6 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:31106331, ECO:0007744|PDB:6NOP |
| Chain | Residue | Details |
| B | GLU147 | |
| B | LYS151 | |
| B | ARG183 | |
| A | GLU147 | |
| A | LYS151 | |
| A | ARG183 |
| site_id | SWS_FT_FI4 |
| Number of Residues | 4 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:31106331 |
| Chain | Residue | Details |
| B | PHE182 | |
| B | TYR221 | |
| A | PHE182 | |
| A | TYR221 |
| site_id | SWS_FT_FI5 |
| Number of Residues | 2 |
| Details | BINDING: BINDING => ECO:0007744|PDB:6NON, ECO:0007744|PDB:6NOO, ECO:0007744|PDB:6NOP |
| Chain | Residue | Details |
| B | GLU217 | |
| A | GLU217 |
| site_id | SWS_FT_FI6 |
| Number of Residues | 2 |
| Details | SITE: McdA subfamily signature lysine residue => ECO:0000303|PubMed:31106331 |
| Chain | Residue | Details |
| B | LYS151 | |
| A | LYS151 |
