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6N9N

Crystal structure of murine GSDMD

Functional Information from GO Data
ChainGOidnamespacecontents
A0001778biological_processplasma membrane repair
A0001786molecular_functionphosphatidylserine binding
A0002376biological_processimmune system process
A0005546molecular_functionphosphatidylinositol-4,5-bisphosphate binding
A0005576cellular_componentextracellular region
A0005615cellular_componentextracellular space
A0005634cellular_componentnucleus
A0005654cellular_componentnucleoplasm
A0005829cellular_componentcytosol
A0005886cellular_componentplasma membrane
A0006351biological_processDNA-templated transcription
A0006954biological_processinflammatory response
A0008289molecular_functionlipid binding
A0009306biological_processprotein secretion
A0012501biological_processprogrammed cell death
A0016020cellular_componentmembrane
A0022829molecular_functionwide pore channel activity
A0031966cellular_componentmitochondrial membrane
A0032731biological_processpositive regulation of interleukin-1 beta production
A0032732biological_processpositive regulation of interleukin-1 production
A0032741biological_processpositive regulation of interleukin-18 production
A0035655biological_processinterleukin-18-mediated signaling pathway
A0042742biological_processdefense response to bacterium
A0044546biological_processNLRP3 inflammasome complex assembly
A0045087biological_processinnate immune response
A0046513biological_processceramide biosynthetic process
A0046931biological_processpore complex assembly
A0050729biological_processpositive regulation of inflammatory response
A0050829biological_processdefense response to Gram-negative bacterium
A0050830biological_processdefense response to Gram-positive bacterium
A0051260biological_processprotein homooligomerization
A0051604biological_processprotein maturation
A0055085biological_processtransmembrane transport
A0061702cellular_componentcanonical inflammasome complex
A0070269biological_processpyroptotic inflammatory response
A0070273molecular_functionphosphatidylinositol-4-phosphate binding
A0070300molecular_functionphosphatidic acid binding
A0070498biological_processinterleukin-1-mediated signaling pathway
A0072559cellular_componentNLRP3 inflammasome complex
A0141201biological_processpyroptotic cell death
A1901612molecular_functioncardiolipin binding
B0001778biological_processplasma membrane repair
B0001786molecular_functionphosphatidylserine binding
B0002376biological_processimmune system process
B0005546molecular_functionphosphatidylinositol-4,5-bisphosphate binding
B0005576cellular_componentextracellular region
B0005615cellular_componentextracellular space
B0005634cellular_componentnucleus
B0005654cellular_componentnucleoplasm
B0005829cellular_componentcytosol
B0005886cellular_componentplasma membrane
B0006351biological_processDNA-templated transcription
B0006954biological_processinflammatory response
B0008289molecular_functionlipid binding
B0009306biological_processprotein secretion
B0012501biological_processprogrammed cell death
B0016020cellular_componentmembrane
B0022829molecular_functionwide pore channel activity
B0031966cellular_componentmitochondrial membrane
B0032731biological_processpositive regulation of interleukin-1 beta production
B0032732biological_processpositive regulation of interleukin-1 production
B0032741biological_processpositive regulation of interleukin-18 production
B0035655biological_processinterleukin-18-mediated signaling pathway
B0042742biological_processdefense response to bacterium
B0044546biological_processNLRP3 inflammasome complex assembly
B0045087biological_processinnate immune response
B0046513biological_processceramide biosynthetic process
B0046931biological_processpore complex assembly
B0050729biological_processpositive regulation of inflammatory response
B0050829biological_processdefense response to Gram-negative bacterium
B0050830biological_processdefense response to Gram-positive bacterium
B0051260biological_processprotein homooligomerization
B0051604biological_processprotein maturation
B0055085biological_processtransmembrane transport
B0061702cellular_componentcanonical inflammasome complex
B0070269biological_processpyroptotic inflammatory response
B0070273molecular_functionphosphatidylinositol-4-phosphate binding
B0070300molecular_functionphosphatidic acid binding
B0070498biological_processinterleukin-1-mediated signaling pathway
B0072559cellular_componentNLRP3 inflammasome complex
B0141201biological_processpyroptotic cell death
B1901612molecular_functioncardiolipin binding
Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues12
DetailsTransmembrane: {"description":"Beta stranded","evidences":[{"source":"UniProtKB","id":"P57764","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues2
DetailsSite: {"description":"Cleavage; by CASP3 or CASP7","evidences":[{"source":"PubMed","id":"37327784","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues2
DetailsSite: {"description":"Cleavage; by papain","evidences":[{"source":"PubMed","id":"35794369","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues2
DetailsModified residue: {"description":"Phosphotyrosine","evidences":[{"source":"UniProtKB","id":"P57764","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues10
DetailsModified residue: {"description":"S-(2-succinyl)cysteine","evidences":[{"source":"PubMed","id":"32820063","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

247947

PDB entries from 2026-01-21

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