Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003824 | molecular_function | catalytic activity |
A | 0008836 | molecular_function | diaminopimelate decarboxylase activity |
A | 0009089 | biological_process | lysine biosynthetic process via diaminopimelate |
B | 0003824 | molecular_function | catalytic activity |
B | 0008836 | molecular_function | diaminopimelate decarboxylase activity |
B | 0009089 | biological_process | lysine biosynthetic process via diaminopimelate |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 21 |
Details | binding site for Di-peptide PLP B 501 and LYS B 502 |
Chain | Residue |
A | CYS367 |
B | GLY259 |
B | GLY260 |
B | GLU296 |
B | PRO297 |
B | GLY298 |
B | ARG299 |
B | ARG335 |
B | TYR339 |
B | TYR396 |
B | HOH605 |
A | GLU368 |
B | HOH617 |
B | HOH624 |
A | TYR404 |
B | ALA79 |
B | LYS81 |
B | ASN123 |
B | VAL182 |
B | HIS220 |
B | SER223 |
Functional Information from PROSITE/UniProt
site_id | PS00878 |
Number of Residues | 19 |
Details | ODR_DC_2_1 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. YAiKANnnlkILehLrslG |
Chain | Residue | Details |
A | TYR78-GLY96 | |
site_id | PS00879 |
Number of Residues | 14 |
Details | ODR_DC_2_2 Orn/DAP/Arg decarboxylases family 2 signature 2. Gfe....VsYLNIGGGLG |
Chain | Residue | Details |
A | GLY249-GLY262 | |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 2 |
Details | Active site: {"description":"Proton donor","evidences":[{"evidenceCode":"ECO:0000255"}]} |
site_id | SWS_FT_FI2 |
Number of Residues | 18 |
Details | Binding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]} |
site_id | SWS_FT_FI3 |
Number of Residues | 2 |
Details | Modified residue: {"description":"N6-(pyridoxal phosphate)lysine","evidences":[{"evidenceCode":"ECO:0000250"}]} |