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6MX2

Crystal Structure of ClpP1 from Clostridium difficile 630.

Functional Information from GO Data
ChainGOidnamespacecontents
A0004176molecular_functionATP-dependent peptidase activity
A0004252molecular_functionserine-type endopeptidase activity
A0005737cellular_componentcytoplasm
A0006508biological_processproteolysis
A0006515biological_processprotein quality control for misfolded or incompletely synthesized proteins
A0008233molecular_functionpeptidase activity
A0008236molecular_functionserine-type peptidase activity
A0009368cellular_componentendopeptidase Clp complex
A0016787molecular_functionhydrolase activity
A0051117molecular_functionATPase binding
B0004176molecular_functionATP-dependent peptidase activity
B0004252molecular_functionserine-type endopeptidase activity
B0005737cellular_componentcytoplasm
B0006508biological_processproteolysis
B0006515biological_processprotein quality control for misfolded or incompletely synthesized proteins
B0008233molecular_functionpeptidase activity
B0008236molecular_functionserine-type peptidase activity
B0009368cellular_componentendopeptidase Clp complex
B0016787molecular_functionhydrolase activity
B0051117molecular_functionATPase binding
C0004176molecular_functionATP-dependent peptidase activity
C0004252molecular_functionserine-type endopeptidase activity
C0005737cellular_componentcytoplasm
C0006508biological_processproteolysis
C0006515biological_processprotein quality control for misfolded or incompletely synthesized proteins
C0008233molecular_functionpeptidase activity
C0008236molecular_functionserine-type peptidase activity
C0009368cellular_componentendopeptidase Clp complex
C0016787molecular_functionhydrolase activity
C0051117molecular_functionATPase binding
D0004176molecular_functionATP-dependent peptidase activity
D0004252molecular_functionserine-type endopeptidase activity
D0005737cellular_componentcytoplasm
D0006508biological_processproteolysis
D0006515biological_processprotein quality control for misfolded or incompletely synthesized proteins
D0008233molecular_functionpeptidase activity
D0008236molecular_functionserine-type peptidase activity
D0009368cellular_componentendopeptidase Clp complex
D0016787molecular_functionhydrolase activity
D0051117molecular_functionATPase binding
E0004176molecular_functionATP-dependent peptidase activity
E0004252molecular_functionserine-type endopeptidase activity
E0005737cellular_componentcytoplasm
E0006508biological_processproteolysis
E0006515biological_processprotein quality control for misfolded or incompletely synthesized proteins
E0008233molecular_functionpeptidase activity
E0008236molecular_functionserine-type peptidase activity
E0009368cellular_componentendopeptidase Clp complex
E0016787molecular_functionhydrolase activity
E0051117molecular_functionATPase binding
F0004176molecular_functionATP-dependent peptidase activity
F0004252molecular_functionserine-type endopeptidase activity
F0005737cellular_componentcytoplasm
F0006508biological_processproteolysis
F0006515biological_processprotein quality control for misfolded or incompletely synthesized proteins
F0008233molecular_functionpeptidase activity
F0008236molecular_functionserine-type peptidase activity
F0009368cellular_componentendopeptidase Clp complex
F0016787molecular_functionhydrolase activity
F0051117molecular_functionATPase binding
G0004176molecular_functionATP-dependent peptidase activity
G0004252molecular_functionserine-type endopeptidase activity
G0005737cellular_componentcytoplasm
G0006508biological_processproteolysis
G0006515biological_processprotein quality control for misfolded or incompletely synthesized proteins
G0008233molecular_functionpeptidase activity
G0008236molecular_functionserine-type peptidase activity
G0009368cellular_componentendopeptidase Clp complex
G0016787molecular_functionhydrolase activity
G0051117molecular_functionATPase binding
H0004176molecular_functionATP-dependent peptidase activity
H0004252molecular_functionserine-type endopeptidase activity
H0005737cellular_componentcytoplasm
H0006508biological_processproteolysis
H0006515biological_processprotein quality control for misfolded or incompletely synthesized proteins
H0008233molecular_functionpeptidase activity
H0008236molecular_functionserine-type peptidase activity
H0009368cellular_componentendopeptidase Clp complex
H0016787molecular_functionhydrolase activity
H0051117molecular_functionATPase binding
I0004176molecular_functionATP-dependent peptidase activity
I0004252molecular_functionserine-type endopeptidase activity
I0005737cellular_componentcytoplasm
I0006508biological_processproteolysis
I0006515biological_processprotein quality control for misfolded or incompletely synthesized proteins
I0008233molecular_functionpeptidase activity
I0008236molecular_functionserine-type peptidase activity
I0009368cellular_componentendopeptidase Clp complex
I0016787molecular_functionhydrolase activity
I0051117molecular_functionATPase binding
J0004176molecular_functionATP-dependent peptidase activity
J0004252molecular_functionserine-type endopeptidase activity
J0005737cellular_componentcytoplasm
J0006508biological_processproteolysis
J0006515biological_processprotein quality control for misfolded or incompletely synthesized proteins
J0008233molecular_functionpeptidase activity
J0008236molecular_functionserine-type peptidase activity
J0009368cellular_componentendopeptidase Clp complex
J0016787molecular_functionhydrolase activity
J0051117molecular_functionATPase binding
K0004176molecular_functionATP-dependent peptidase activity
K0004252molecular_functionserine-type endopeptidase activity
K0005737cellular_componentcytoplasm
K0006508biological_processproteolysis
K0006515biological_processprotein quality control for misfolded or incompletely synthesized proteins
K0008233molecular_functionpeptidase activity
K0008236molecular_functionserine-type peptidase activity
K0009368cellular_componentendopeptidase Clp complex
K0016787molecular_functionhydrolase activity
K0051117molecular_functionATPase binding
L0004176molecular_functionATP-dependent peptidase activity
L0004252molecular_functionserine-type endopeptidase activity
L0005737cellular_componentcytoplasm
L0006508biological_processproteolysis
L0006515biological_processprotein quality control for misfolded or incompletely synthesized proteins
L0008233molecular_functionpeptidase activity
L0008236molecular_functionserine-type peptidase activity
L0009368cellular_componentendopeptidase Clp complex
L0016787molecular_functionhydrolase activity
L0051117molecular_functionATPase binding
M0004176molecular_functionATP-dependent peptidase activity
M0004252molecular_functionserine-type endopeptidase activity
M0005737cellular_componentcytoplasm
M0006508biological_processproteolysis
M0006515biological_processprotein quality control for misfolded or incompletely synthesized proteins
M0008233molecular_functionpeptidase activity
M0008236molecular_functionserine-type peptidase activity
M0009368cellular_componentendopeptidase Clp complex
M0016787molecular_functionhydrolase activity
M0051117molecular_functionATPase binding
N0004176molecular_functionATP-dependent peptidase activity
N0004252molecular_functionserine-type endopeptidase activity
N0005737cellular_componentcytoplasm
N0006508biological_processproteolysis
N0006515biological_processprotein quality control for misfolded or incompletely synthesized proteins
N0008233molecular_functionpeptidase activity
N0008236molecular_functionserine-type peptidase activity
N0009368cellular_componentendopeptidase Clp complex
N0016787molecular_functionhydrolase activity
N0051117molecular_functionATPase binding
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue NA A 201
ChainResidue
AMET80
AILE83
APRO85
AHOH322

site_idAC2
Number of Residues4
Detailsbinding site for residue NA B 201
ChainResidue
BMET80
BILE83
BPRO85
BHOH337

site_idAC3
Number of Residues4
Detailsbinding site for residue NA C 201
ChainResidue
CILE83
CPRO85
CHOH339
CMET80

site_idAC4
Number of Residues3
Detailsbinding site for residue NA D 201
ChainResidue
DMET80
DILE83
DPRO85

site_idAC5
Number of Residues4
Detailsbinding site for residue NA E 201
ChainResidue
EMET80
EILE83
EPRO85
EHOH351

site_idAC6
Number of Residues6
Detailsbinding site for residue NA F 201
ChainResidue
FMET80
FILE83
FPRO85
FHOH306
FHOH318
FHOH320

site_idAC7
Number of Residues4
Detailsbinding site for residue NA G 201
ChainResidue
GMET80
GILE83
GPRO85
GHOH333

site_idAC8
Number of Residues4
Detailsbinding site for residue NA G 202
ChainResidue
GGLY67
GGLY68
GSER97
GMET98

site_idAC9
Number of Residues5
Detailsbinding site for residue NA H 201
ChainResidue
HMET80
HILE83
HPRO85
HHOH333
IHOH314

site_idAD1
Number of Residues4
Detailsbinding site for residue NA I 201
ChainResidue
IMET80
IILE83
IPRO85
IHOH342

site_idAD2
Number of Residues4
Detailsbinding site for residue NA I 202
ChainResidue
IGLY68
ISER97
IMET98
IHOH352

site_idAD3
Number of Residues5
Detailsbinding site for residue NA J 201
ChainResidue
JMET80
JILE83
JPRO85
JHOH332
KHOH349

site_idAD4
Number of Residues4
Detailsbinding site for residue NA K 201
ChainResidue
KMET80
KILE83
KPRO85
KHOH345

site_idAD5
Number of Residues4
Detailsbinding site for residue NA L 201
ChainResidue
LMET80
LILE83
LPRO85
LHOH329

site_idAD6
Number of Residues4
Detailsbinding site for residue NA L 202
ChainResidue
LLYS146
LGLU147
LASN150
LLYS165

site_idAD7
Number of Residues4
Detailsbinding site for residue GOL M 201
ChainResidue
MSER97
MMET98
MHIS122
MLEU149

site_idAD8
Number of Residues4
Detailsbinding site for residue NA M 202
ChainResidue
MMET80
MILE83
MPRO85
MHOH333

site_idAD9
Number of Residues5
Detailsbinding site for residue GOL N 201
ChainResidue
NSER97
NMET98
NILE121
NHIS122
NLEU149

site_idAE1
Number of Residues5
Detailsbinding site for residue NA N 202
ChainResidue
NMET80
NILE83
NLYS84
NPRO85
NHOH328

Functional Information from PROSITE/UniProt
site_idPS00381
Number of Residues12
DetailsCLP_PROTEASE_SER Endopeptidase Clp serine active site. TicIGmAASMGA
ChainResidueDetails
ATHR89-ALA100

site_idPS00382
Number of Residues14
DetailsCLP_PROTEASE_HIS Endopeptidase Clp histidine active site. RlalPnseIMIHQP
ChainResidueDetails
AARG111-PRO124

238268

PDB entries from 2025-07-02

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