6MWC
CryoEM structure of chimeric Eastern Equine Encephalitis Virus with Fab of EEEV-5 antibody
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0004252 | molecular_function | serine-type endopeptidase activity |
| A | 0019028 | cellular_component | viral capsid |
| A | 0055036 | cellular_component | virion membrane |
| B | 0005198 | molecular_function | structural molecule activity |
| B | 0019028 | cellular_component | viral capsid |
| E | 0004252 | molecular_function | serine-type endopeptidase activity |
| E | 0019028 | cellular_component | viral capsid |
| E | 0055036 | cellular_component | virion membrane |
| F | 0005198 | molecular_function | structural molecule activity |
| F | 0019028 | cellular_component | viral capsid |
| I | 0004252 | molecular_function | serine-type endopeptidase activity |
| I | 0019028 | cellular_component | viral capsid |
| I | 0055036 | cellular_component | virion membrane |
| J | 0005198 | molecular_function | structural molecule activity |
| J | 0019028 | cellular_component | viral capsid |
| M | 0004252 | molecular_function | serine-type endopeptidase activity |
| M | 0019028 | cellular_component | viral capsid |
| M | 0055036 | cellular_component | virion membrane |
| N | 0005198 | molecular_function | structural molecule activity |
| N | 0019028 | cellular_component | viral capsid |
Functional Information from PROSITE/UniProt
| site_id | PS00290 |
| Number of Residues | 7 |
| Details | IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YSCQVTH |
| Chain | Residue | Details |
| D | TYR694-HIS700 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 1452 |
| Details | TOPO_DOM: Extracellular => ECO:0000255 |
| Chain | Residue | Details |
| B | ASP488-THR851 | |
| F | ASP1488-THR1851 | |
| J | ASP2488-THR2851 | |
| N | ASP3488-THR3851 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 80 |
| Details | TRANSMEM: Helical => ECO:0000255 |
| Chain | Residue | Details |
| B | ILE852-LEU872 | |
| F | ILE1852-LEU1872 | |
| J | ILE2852-LEU2872 | |
| N | ILE3852-LEU3872 |
| site_id | SWS_FT_FI3 |
| Number of Residues | 136 |
| Details | TOPO_DOM: Cytoplasmic => ECO:0000255 |
| Chain | Residue | Details |
| B | LEU873-ALA907 | |
| F | LEU1873-ALA1907 | |
| J | LEU2873-ALA2907 | |
| N | LEU3873-ALA3907 |
| site_id | SWS_FT_FI4 |
| Number of Residues | 4 |
| Details | SITE: Cleavage; by host signal peptidase => ECO:0000250 |
| Chain | Residue | Details |
| B | ALA907 | |
| F | ALA1907 | |
| J | ALA2907 | |
| N | ALA3907 |
| site_id | SWS_FT_FI5 |
| Number of Residues | 12 |
| Details | LIPID: S-palmitoyl cysteine; by host => ECO:0000250 |
| Chain | Residue | Details |
| B | CYS880 | |
| N | CYS3880 | |
| N | CYS3900 | |
| N | CYS3901 | |
| B | CYS900 | |
| B | CYS901 | |
| F | CYS1880 | |
| F | CYS1900 | |
| F | CYS1901 | |
| J | CYS2880 | |
| J | CYS2900 | |
| J | CYS2901 |
