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6MP8

X-ray crystal structure of VioC bound to Fe(II), D-arginine, and 2-oxoglutarate

Functional Information from GO Data
ChainGOidnamespacecontents
A0005506molecular_functioniron ion binding
A0016020cellular_componentmembrane
A0016491molecular_functionoxidoreductase activity
A0016706molecular_function2-oxoglutarate-dependent dioxygenase activity
A0017000biological_processantibiotic biosynthetic process
A0046872molecular_functionmetal ion binding
A0102525molecular_function2-oxoglutarate, L-arginine oxygenase (succinate-forming) activity
Functional Information from PDB Data
site_idAC1
Number of Residues13
Detailsbinding site for residue AKG A 401
ChainResidue
AVAL146
AARG334
AFE2402
ADAR403
AHOH521
ASER158
ALEU165
AGLU170
ATHR194
AHIS316
AARG318
AARG330
ALEU332

site_idAC2
Number of Residues5
Detailsbinding site for residue FE2 A 402
ChainResidue
AHIS168
AGLU170
AHIS316
AAKG401
ADAR403

site_idAC3
Number of Residues11
Detailsbinding site for residue DAR A 403
ChainResidue
ALEU156
AVAL157
ASER158
ALEU165
AHIS168
AGLU170
AASP268
AASP270
APHE271
AAKG401
AFE2402

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues18
DetailsTRANSMEM: Helical => ECO:0000255
ChainResidueDetails
ALEU117-ALA135

site_idSWS_FT_FI2
Number of Residues8
DetailsBINDING:
ChainResidueDetails
ATHR194
AASP268
AHIS316
AARG330
AARG334
ALEU156
AHIS168
AGLU170

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PDB entries from 2024-05-29

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