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6MME

Citrobacter freundii tyrosine phenol-lyase complexed with 4-hydroxypyridine and aminoacrylate from S-ethyl-L-cysteine

Functional Information from GO Data
ChainGOidnamespacecontents
A0006520biological_processamino acid metabolic process
A0006570biological_processtyrosine metabolic process
A0009072biological_processaromatic amino acid metabolic process
A0016829molecular_functionlyase activity
A0016830molecular_functioncarbon-carbon lyase activity
A0050371molecular_functiontyrosine phenol-lyase activity
B0006520biological_processamino acid metabolic process
B0006570biological_processtyrosine metabolic process
B0009072biological_processaromatic amino acid metabolic process
B0016829molecular_functionlyase activity
B0016830molecular_functioncarbon-carbon lyase activity
B0050371molecular_functiontyrosine phenol-lyase activity
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue K A 501
ChainResidue
AGLY52
AASN262
AHOH720
BGLU69
BHOH1792

site_idAC2
Number of Residues1
Detailsbinding site for residue CQG A 502
ChainResidue
AARG323

site_idAC3
Number of Residues8
Detailsbinding site for residue CQG A 503
ChainResidue
AARG381
APHE448
APHE449
A0JO504
BTYR71
AARG100
APHE123
ATHR124

site_idAC4
Number of Residues15
Detailsbinding site for residue 0JO A 504
ChainResidue
ATHR49
ASER51
AGLN98
AGLY99
AARG100
AGLU103
APHE123
AASN185
AASP214
AARG217
ASER254
ALYS257
AARG404
ACQG503
AHOH641

site_idAC5
Number of Residues6
Detailsbinding site for residue K A 505
ChainResidue
AGLU69
AHOH689
AHOH701
BGLY52
BASN262
BHOH1864

site_idAC6
Number of Residues9
Detailsbinding site for residue CQG A 506
ChainResidue
AASP68
AGLU75
BGLU14
BTHR15
BVAL16
BSER40
BLYS41
BHOH1795
BHOH1975

site_idAC7
Number of Residues8
Detailsbinding site for residue P33 B 1601
ChainResidue
ATYR3
ATYR324
ATYR414
AALA415
BTYR3
BTYR324
BASP418
BHOH1903

site_idAC8
Number of Residues15
Detailsbinding site for residue 0JO B 1602
ChainResidue
ATYR71
BTHR49
BSER51
BGLN98
BGLY99
BARG100
BGLU103
BPHE123
BASN185
BASP214
BARG217
BSER254
BLYS257
BARG404
BHOH1732

Functional Information from PROSITE/UniProt
site_idPS00853
Number of Residues19
DetailsBETA_ELIM_LYASE Beta-eliminating lyases pyridoxal-phosphate attachment site. YaDgctMSGKKDcLVnIGG
ChainResidueDetails
ATYR247-GLY265

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsMOD_RES: N6-(pyridoxal phosphate)lysine
ChainResidueDetails
ALYS257
BLYS257

Catalytic Information from CSA
site_idMCSA1
Number of Residues7
DetailsM-CSA 933
ChainResidueDetails
ATYR71proton acceptor, proton donor
APHE123steric role
ATHR124electrostatic stabiliser
AASP214electrostatic stabiliser
ALYS257covalently attached, electron pair acceptor, electron pair donor, nucleofuge, nucleophile, proton acceptor, proton donor
AARG381electrostatic stabiliser
APHE448electrostatic stabiliser, ground state destabiliser

site_idMCSA2
Number of Residues7
DetailsM-CSA 933
ChainResidueDetails
BTYR71proton acceptor, proton donor
BPHE123steric role
BTHR124electrostatic stabiliser
BASP214electrostatic stabiliser
BLYS257covalently attached, electron pair acceptor, electron pair donor, nucleofuge, nucleophile, proton acceptor, proton donor
BARG381electrostatic stabiliser
BPHE448electrostatic stabiliser, ground state destabiliser

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PDB entries from 2024-07-17

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