6MEC

Structure of a group II intron retroelement after DNA integration

Functional Information from GO Data

Chain	GOid	namespace	contents
C	0003676	molecular_function	nucleic acid binding
C	0003964	molecular_function	RNA-directed DNA polymerase activity
C	0004519	molecular_function	endonuclease activity
C	0006278	biological_process	RNA-templated DNA biosynthetic process
C	0006974	biological_process	DNA damage response
C	0008270	molecular_function	zinc ion binding

Functional Information from PDB Data

site_id	AC1
Number of Residues	3
Details	binding site for residue MG A 901

Chain	Residue
A	A481
A	A792
A	A815

---

site_id	AC2
Number of Residues	2
Details	binding site for residue MG A 902

Chain	Residue
A	G5
A	A6

---

site_id	AC3
Number of Residues	3
Details	binding site for residue MG A 903

Chain	Residue
A	A812
A	C813
B	DG14

---

site_id	AC4
Number of Residues	2
Details	binding site for residue MG A 904

Chain	Residue
A	U817
A	A815

---

site_id	AC5
Number of Residues	2
Details	binding site for residue MG A 905

Chain	Residue
A	A157
A	G158

---

site_id	AC6
Number of Residues	1
Details	binding site for residue MG A 906

Chain	Residue
A	U30

---

site_id	AC7
Number of Residues	2
Details	binding site for residue MG A 907

Chain	Residue
A	G486
A	G487

---

site_id	AC8
Number of Residues	2
Details	binding site for residue MG A 908

Chain	Residue
A	U28
A	U215

---

site_id	AC9
Number of Residues	1
Details	binding site for residue MG A 909

Chain	Residue
A	U292

---

site_id	AD1
Number of Residues	1
Details	binding site for residue MG A 910

Chain	Residue
A	A340

---

site_id	AD2
Number of Residues	2
Details	binding site for residue MG A 911

Chain	Residue
A	G90
A	C91

---

site_id	AD3
Number of Residues	1
Details	binding site for residue MG A 912

Chain	Residue
A	U397

---

site_id	AD4
Number of Residues	2
Details	binding site for residue MG A 913

Chain	Residue
A	A243
A	U244

---

site_id	AD5
Number of Residues	3
Details	binding site for residue MG A 914

Chain	Residue
A	C742
A	A743
A	U761

---

site_id	AD6
Number of Residues	2
Details	binding site for residue MG A 915

Chain	Residue
A	G98
A	A99

---

site_id	AD7
Number of Residues	1
Details	binding site for residue MG A 916

Chain	Residue
A	G252

---

site_id	AD8
Number of Residues	1
Details	binding site for residue MG A 917

Chain	Residue
A	A202

---

site_id	AD9
Number of Residues	1
Details	binding site for residue MG A 918

Chain	Residue
A	C141

---

site_id	AE1
Number of Residues	1
Details	binding site for residue MG A 919

Chain	Residue
A	C131

---

site_id	AE2
Number of Residues	3
Details	binding site for residue MG A 920

Chain	Residue
A	U64
A	G316
A	C317

---

site_id	AE3
Number of Residues	1
Details	binding site for residue MG A 921

Chain	Residue
A	G113

---

site_id	AE4
Number of Residues	1
Details	binding site for residue MG A 923

Chain	Residue
A	U318

---

site_id	AE5
Number of Residues	1
Details	binding site for residue MG A 927

Chain	Residue
A	C68

---

site_id	AE6
Number of Residues	2
Details	binding site for residue MG A 928

Chain	Residue
A	A416
A	U417

---

site_id	AE7
Number of Residues	1
Details	binding site for residue MG A 929

Chain	Residue
A	C15

---

site_id	AE8
Number of Residues	1
Details	binding site for residue MG A 930

Chain	Residue
A	G86

---

site_id	AE9
Number of Residues	1
Details	binding site for residue MG A 931

Chain	Residue
A	A378

---

site_id	AF1
Number of Residues	1
Details	binding site for residue MG A 932

Chain	Residue
A	G65

---

site_id	AF2
Number of Residues	1
Details	binding site for residue MG A 933

Chain	Residue
A	C363

---

site_id	AF3
Number of Residues	1
Details	binding site for residue MG A 935

Chain	Residue
A	A559

---

site_id	AF4
Number of Residues	1
Details	binding site for residue MG A 936

Chain	Residue
A	A745

---

site_id	AF5
Number of Residues	1
Details	binding site for residue MG A 937

Chain	Residue
A	G793

---

site_id	AF6
Number of Residues	2
Details	binding site for residue MG A 939

Chain	Residue
A	G736
A	U737

---

site_id	AF7
Number of Residues	4
Details	binding site for residue MG A 940

Chain	Residue
A	G252
A	C253
A	G362
A	C363

---

site_id	AF8
Number of Residues	1
Details	binding site for residue MG A 941

Chain	Residue
A	G225

---

site_id	AF9
Number of Residues	1
Details	binding site for residue MG A 944

Chain	Residue
A	A321

---

site_id	AG1
Number of Residues	1
Details	binding site for residue MG A 945

Chain	Residue
A	G342

---

site_id	AG2
Number of Residues	1
Details	binding site for residue MG A 947

Chain	Residue
A	G77

---

site_id	AG3
Number of Residues	1
Details	binding site for residue MG A 948

Chain	Residue
A	A377

---

site_id	AG4
Number of Residues	1
Details	binding site for residue MG A 950

Chain	Residue
A	G816

---

site_id	AG5
Number of Residues	4
Details	binding site for residue NA A 951

Chain	Residue
A	C19
A	C20
A	G394
A	G395

---

Functional Information from PROSITE/UniProt

site_id	PS00028
Number of Residues	23
Details	ZINC_FINGER_C2H2_1 Zinc finger C2H2 type domain signature. Cpv..CggeIeqdmlteiHhilpkH

Chain	Residue	Details
C	CYS503-HIS525

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