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6MDB

Non-receptor Protein Tyrosine Phosphatase SHP2 in Complex with Allosteric Inhibitor Pyrazolo-pyrimidinone 5

Functional Information from GO Data
ChainGOidnamespacecontents
A0004725molecular_functionprotein tyrosine phosphatase activity
A0006470biological_processprotein dephosphorylation
A0016311biological_processdephosphorylation
B0004725molecular_functionprotein tyrosine phosphatase activity
B0006470biological_processprotein dephosphorylation
B0016311biological_processdephosphorylation
Functional Information from PDB Data
site_idAC1
Number of Residues13
Detailsbinding site for residue JE4 A 601
ChainResidue
AARG111
APRO491
AGLN495
AHOH734
AHOH783
APHE113
ALEU216
ATHR218
ATHR219
AGLU249
AGLU250
ATHR253
AGLN257

site_idAC2
Number of Residues5
Detailsbinding site for residue PO4 A 602
ChainResidue
AARG32
ASER34
ALYS35
ASER36
ATHR42

site_idAC3
Number of Residues4
Detailsbinding site for residue PO4 A 603
ChainResidue
AASN410
ATHR411
AGLU412
AARG413

site_idAC4
Number of Residues14
Detailsbinding site for residue JE4 B 601
ChainResidue
BARG111
BPHE113
BHIS114
BTHR218
BGLU249
BGLU250
BTHR253
BLEU254
BGLN257
BPRO491
BLYS492
BGLN495
BHOH753
BHOH916

site_idAC5
Number of Residues7
Detailsbinding site for residue PO4 B 602
ChainResidue
BARG32
BSER34
BLYS35
BSER36
BTHR42
BMET311
BHOH816

Functional Information from PROSITE/UniProt
site_idPS00383
Number of Residues11
DetailsTYR_PHOSPHATASE_1 Tyrosine specific protein phosphatases active site. VHCsaGigRTG
ChainResidueDetails
AVAL457-GLY467

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsActive site: {"description":"Phosphocysteine intermediate"}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues16
DetailsBinding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues2
DetailsModified residue: {"description":"Phosphotyrosine","evidences":[{"source":"PubMed","id":"19690332","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues2
DetailsModified residue: {"description":"Phosphotyrosine","evidences":[{"source":"UniProtKB","id":"P35235","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

245011

PDB entries from 2025-11-19

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