Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6LYM

Crystal structure of D657A mutant of formylglycinamidine synthetase

Functional Information from GO Data
ChainGOidnamespacecontents
A0004642molecular_functionphosphoribosylformylglycinamidine synthase activity
A0005524molecular_functionATP binding
A0005737cellular_componentcytoplasm
A0006164biological_processpurine nucleotide biosynthetic process
A0006189biological_process'de novo' IMP biosynthetic process
A0006541biological_processglutamine metabolic process
A0016874molecular_functionligase activity
A0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues31
Detailsbinding site for residue ADP A 1301
ChainResidue
AVAL333
AALA678
AASP679
AGLU718
AASN722
ASER886
AMG1302
AMG1303
AMG1304
AHOH1433
AHOH1437
ATHR386
AHOH1460
AHOH1523
AHOH1537
AHOH1542
AHOH1544
AHOH1577
AHOH1593
AHOH1597
AHOH1629
AHOH1632
AGLY387
AHOH1635
AHOH1644
ATYR388
APHE389
ALYS649
ALEU652
AGLN668
APRO676

site_idAC2
Number of Residues6
Detailsbinding site for residue MG A 1302
ChainResidue
AASP679
AASN722
AASP884
AADP1301
AHOH1577
AHOH1644

site_idAC3
Number of Residues6
Detailsbinding site for residue MG A 1303
ChainResidue
AGLU718
AADP1301
AHOH1431
AHOH1460
AHOH1523
AHOH1544

site_idAC4
Number of Residues5
Detailsbinding site for residue MG A 1304
ChainResidue
AADP1301
AHOH1433
AHOH1437
AHOH1542
AHOH1629

site_idAC5
Number of Residues4
Detailsbinding site for residue SO4 A 1305
ChainResidue
AGLU294
AGLY504
AALA505
AHOH1415

site_idAC6
Number of Residues5
Detailsbinding site for residue SO4 A 1306
ChainResidue
ATHR295
AHIS296
AASN297
AHIS298
ASER778

site_idAC7
Number of Residues5
Detailsbinding site for residue SO4 A 1307
ChainResidue
ATYR690
AARG812
ALYS1228
AVAL1229
AHOH1448

site_idAC8
Number of Residues6
Detailsbinding site for residue SO4 A 1308
ChainResidue
AGLN1176
AGLN1183
AGLY1184
AMET1185
AVAL1186
AHOH1576

site_idAC9
Number of Residues7
Detailsbinding site for residue SO4 A 1309
ChainResidue
AHIS1086
AARG1126
APRO1127
AGLN1128
ATHR1129
AHOH1425
AHOH1618

site_idAD1
Number of Residues4
Detailsbinding site for residue SO4 A 1310
ChainResidue
AGLN767
AASP859
AVAL860
AALA861

site_idAD2
Number of Residues4
Detailsbinding site for residue SO4 A 1311
ChainResidue
AVAL432
ATHR581
AGLU582
AGLU583

site_idAD3
Number of Residues6
Detailsbinding site for residue SO4 A 1312
ChainResidue
ATRP305
AARG1159
AARG1164
AHOH1447
AHOH1583
AHOH1695

site_idAD4
Number of Residues4
Detailsbinding site for residue SO4 A 1313
ChainResidue
APRO1040
ALYS1041
AHIS1086
AHOH1422

site_idAD5
Number of Residues2
Detailsbinding site for residue SO4 A 1314
ChainResidue
AASN1113
AARG1115

site_idAD6
Number of Residues5
Detailsbinding site for residue SO4 A 1315
ChainResidue
AHIS1161
ASER12
AALA13
APHE14
AASN998

site_idAD7
Number of Residues2
Detailsbinding site for residue SO4 A 1316
ChainResidue
AHIS68
ATHR69

site_idAD8
Number of Residues3
Detailsbinding site for residue SO4 A 1317
ChainResidue
AALA911
AVAL952
AHIS953

site_idAD9
Number of Residues2
Detailsbinding site for residue SO4 A 1318
ChainResidue
AHIS153
AGLN154

site_idAE1
Number of Residues3
Detailsbinding site for residue SO4 A 1319
ChainResidue
APRO356
AGLU357
AARG358

site_idAE2
Number of Residues5
Detailsbinding site for residue SO4 A 1320
ChainResidue
ATHR632
AILE633
AHOH1420
AHOH1496
AHOH1778

site_idAE3
Number of Residues3
Detailsbinding site for residue SO4 A 1321
ChainResidue
ALYS833
AHIS835
AHOH1419

site_idAE4
Number of Residues7
Detailsbinding site for residue SO4 A 1322
ChainResidue
AVAL616
AGLN617
APRO747
AGLY748
AHOH1432
AHOH1532
AHOH1622

site_idAE5
Number of Residues6
Detailsbinding site for residue GOL A 1323
ChainResidue
ALYS327
AARG479
AASN1051
AVAL1054
AGLU1055
AHOH1428

site_idAE6
Number of Residues2
Detailsbinding site for residue EDO A 1324
ChainResidue
AASN1251
AARG1253

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: Nucleophile => ECO:0000255|HAMAP-Rule:MF_00419
ChainResidueDetails
ACYG1135

site_idSWS_FT_FI2
Number of Residues2
DetailsACT_SITE: ACT_SITE => ECO:0000255|HAMAP-Rule:MF_00419
ChainResidueDetails
AHIS1260
AGLU1262

site_idSWS_FT_FI3
Number of Residues1
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00419
ChainResidueDetails
AGLY307

site_idSWS_FT_FI4
Number of Residues3
DetailsBINDING:
ChainResidueDetails
ATHR386
AALA678
ASER886

site_idSWS_FT_FI5
Number of Residues4
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00419, ECO:0000269|PubMed:15301531, ECO:0000269|PubMed:22683785, ECO:0000269|PubMed:24223728
ChainResidueDetails
AASP679
AGLU718
AASN722
AASP884

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon