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6LXT

Structure of post fusion core of 2019-nCoV S2 subunit

Functional Information from GO Data
ChainGOidnamespacecontents
A0016020cellular_componentmembrane
A0019031cellular_componentviral envelope
A0019064biological_processfusion of virus membrane with host plasma membrane
A0039654biological_processfusion of virus membrane with host endosome membrane
A0046813biological_processreceptor-mediated virion attachment to host cell
A0055036cellular_componentvirion membrane
A0075509biological_processendocytosis involved in viral entry into host cell
B0016020cellular_componentmembrane
B0019031cellular_componentviral envelope
B0019064biological_processfusion of virus membrane with host plasma membrane
B0039654biological_processfusion of virus membrane with host endosome membrane
B0046813biological_processreceptor-mediated virion attachment to host cell
B0055036cellular_componentvirion membrane
B0075509biological_processendocytosis involved in viral entry into host cell
C0016020cellular_componentmembrane
C0019031cellular_componentviral envelope
C0019064biological_processfusion of virus membrane with host plasma membrane
C0039654biological_processfusion of virus membrane with host endosome membrane
C0046813biological_processreceptor-mediated virion attachment to host cell
C0055036cellular_componentvirion membrane
C0075509biological_processendocytosis involved in viral entry into host cell
D0016020cellular_componentmembrane
D0019031cellular_componentviral envelope
D0019064biological_processfusion of virus membrane with host plasma membrane
D0039654biological_processfusion of virus membrane with host endosome membrane
D0046813biological_processreceptor-mediated virion attachment to host cell
D0055036cellular_componentvirion membrane
D0075509biological_processendocytosis involved in viral entry into host cell
E0016020cellular_componentmembrane
E0019031cellular_componentviral envelope
E0019064biological_processfusion of virus membrane with host plasma membrane
E0039654biological_processfusion of virus membrane with host endosome membrane
E0046813biological_processreceptor-mediated virion attachment to host cell
E0055036cellular_componentvirion membrane
E0075509biological_processendocytosis involved in viral entry into host cell
F0016020cellular_componentmembrane
F0019031cellular_componentviral envelope
F0019064biological_processfusion of virus membrane with host plasma membrane
F0039654biological_processfusion of virus membrane with host endosome membrane
F0046813biological_processreceptor-mediated virion attachment to host cell
F0055036cellular_componentvirion membrane
F0075509biological_processendocytosis involved in viral entry into host cell
Functional Information from PDB Data
site_idAC1
Number of Residues2
Detailsbinding site for residue PG4 A 1301
ChainResidue
AARG1185
APG41303

site_idAC2
Number of Residues3
Detailsbinding site for residue ZN A 1302
ChainResidue
AGLN949
AASP950
AGLN1180

site_idAC3
Number of Residues3
Detailsbinding site for residue PG4 A 1303
ChainResidue
AASP1184
AGLU1188
APG41301

site_idAC4
Number of Residues3
Detailsbinding site for residue ZN A 1304
ChainResidue
EASP1163
EASP1165
AASP1165

site_idAC5
Number of Residues1
Detailsbinding site for residue ZN B 1301
ChainResidue
BASP936

site_idAC6
Number of Residues1
Detailsbinding site for residue ZN B 1302
ChainResidue
BASP985

site_idAC7
Number of Residues1
Detailsbinding site for residue ZN F 1301
ChainResidue
FASP950

site_idAC8
Number of Residues1
Detailsbinding site for residue ZN F 1302
ChainResidue
FGLU918

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues300
DetailsRegion: {"description":"Heptad repeat 1","evidences":[{"source":"HAMAP-Rule","id":"MF_04099","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues6
DetailsGlycosylation: {"description":"N-linked (GlcNAc...) (complex) asparagine; by host","evidences":[{"source":"HAMAP-Rule","id":"MF_04099","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"32366695","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"32979942","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues6
DetailsGlycosylation: {"description":"N-linked (GlcNAc...) (complex) asparagine; by host","evidences":[{"source":"HAMAP-Rule","id":"MF_04099","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"32363391","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"32366695","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"32979942","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues117
DetailsRegion: {"description":"Heptad repeat 2","evidences":[{"source":"HAMAP-Rule","id":"MF_04099","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

243083

PDB entries from 2025-10-15

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