Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

6LTJ

Structure of nucleosome-bound human BAF complex

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0000776	cellular_component	kinetochore
A	0000786	cellular_component	nucleosome
A	0003677	molecular_function	DNA binding
A	0005634	cellular_component	nucleus
A	0005694	cellular_component	chromosome
A	0007080	biological_process	mitotic metaphase chromosome alignment
A	0030527	molecular_function	structural constituent of chromatin
A	0031492	molecular_function	nucleosomal DNA binding
A	0031507	biological_process	heterochromatin formation
A	0046982	molecular_function	protein heterodimerization activity
A	0051382	biological_process	kinetochore assembly
B	0000786	cellular_component	nucleosome
B	0003677	molecular_function	DNA binding
B	0005515	molecular_function	protein binding
B	0005634	cellular_component	nucleus
B	0005694	cellular_component	chromosome
B	0006334	biological_process	nucleosome assembly
B	0030527	molecular_function	structural constituent of chromatin
B	0031507	biological_process	heterochromatin formation
B	0046982	molecular_function	protein heterodimerization activity
C	0000786	cellular_component	nucleosome
C	0003677	molecular_function	DNA binding
C	0005634	cellular_component	nucleus
C	0005694	cellular_component	chromosome
C	0030527	molecular_function	structural constituent of chromatin
C	0031507	biological_process	heterochromatin formation
C	0046982	molecular_function	protein heterodimerization activity
D	0000786	cellular_component	nucleosome
D	0002227	biological_process	innate immune response in mucosa
D	0003677	molecular_function	DNA binding
D	0005515	molecular_function	protein binding
D	0005615	cellular_component	extracellular space
D	0005634	cellular_component	nucleus
D	0005694	cellular_component	chromosome
D	0006325	biological_process	chromatin organization
D	0019731	biological_process	antibacterial humoral response
D	0030527	molecular_function	structural constituent of chromatin
D	0031507	biological_process	heterochromatin formation
D	0046982	molecular_function	protein heterodimerization activity
D	0061844	biological_process	antimicrobial humoral immune response mediated by antimicrobial peptide
E	0000776	cellular_component	kinetochore
E	0000786	cellular_component	nucleosome
E	0003677	molecular_function	DNA binding
E	0005634	cellular_component	nucleus
E	0005694	cellular_component	chromosome
E	0007080	biological_process	mitotic metaphase chromosome alignment
E	0030527	molecular_function	structural constituent of chromatin
E	0031492	molecular_function	nucleosomal DNA binding
E	0031507	biological_process	heterochromatin formation
E	0046982	molecular_function	protein heterodimerization activity
E	0051382	biological_process	kinetochore assembly
F	0000786	cellular_component	nucleosome
F	0003677	molecular_function	DNA binding
F	0005515	molecular_function	protein binding
F	0005634	cellular_component	nucleus
F	0005694	cellular_component	chromosome
F	0006334	biological_process	nucleosome assembly
F	0030527	molecular_function	structural constituent of chromatin
F	0031507	biological_process	heterochromatin formation
F	0046982	molecular_function	protein heterodimerization activity
G	0000786	cellular_component	nucleosome
G	0003677	molecular_function	DNA binding
G	0005634	cellular_component	nucleus
G	0005694	cellular_component	chromosome
G	0030527	molecular_function	structural constituent of chromatin
G	0031507	biological_process	heterochromatin formation
G	0046982	molecular_function	protein heterodimerization activity
H	0000786	cellular_component	nucleosome
H	0002227	biological_process	innate immune response in mucosa
H	0003677	molecular_function	DNA binding
H	0005515	molecular_function	protein binding
H	0005615	cellular_component	extracellular space
H	0005634	cellular_component	nucleus
H	0005694	cellular_component	chromosome
H	0006325	biological_process	chromatin organization
H	0019731	biological_process	antibacterial humoral response
H	0030527	molecular_function	structural constituent of chromatin
H	0031507	biological_process	heterochromatin formation
H	0046982	molecular_function	protein heterodimerization activity
H	0061844	biological_process	antimicrobial humoral immune response mediated by antimicrobial peptide
I	0000122	biological_process	negative regulation of transcription by RNA polymerase II
I	0000166	molecular_function	nucleotide binding
I	0000776	cellular_component	kinetochore
I	0000785	cellular_component	chromatin
I	0001164	molecular_function	RNA polymerase I core promoter sequence-specific DNA binding
I	0001188	biological_process	RNA polymerase I preinitiation complex assembly
I	0001221	molecular_function	transcription coregulator binding
I	0001650	cellular_component	fibrillar center
I	0002039	molecular_function	p53 binding
I	0003407	biological_process	neural retina development
I	0003677	molecular_function	DNA binding
I	0003682	molecular_function	chromatin binding
I	0003713	molecular_function	transcription coactivator activity
I	0003714	molecular_function	transcription corepressor activity
I	0003723	molecular_function	RNA binding
I	0004386	molecular_function	helicase activity
I	0005515	molecular_function	protein binding
I	0005524	molecular_function	ATP binding
I	0005615	cellular_component	extracellular space
I	0005634	cellular_component	nucleus
I	0005654	cellular_component	nucleoplasm
I	0005730	cellular_component	nucleolus
I	0006325	biological_process	chromatin organization
I	0006337	biological_process	nucleosome disassembly
I	0006338	biological_process	chromatin remodeling
I	0006351	biological_process	DNA-templated transcription
I	0006355	biological_process	regulation of DNA-templated transcription
I	0006357	biological_process	regulation of transcription by RNA polymerase II
I	0007399	biological_process	nervous system development
I	0008094	molecular_function	ATP-dependent activity, acting on DNA
I	0008284	biological_process	positive regulation of cell population proliferation
I	0016020	cellular_component	membrane
I	0016363	cellular_component	nuclear matrix
I	0016514	cellular_component	SWI/SNF complex
I	0016787	molecular_function	hydrolase activity
I	0016887	molecular_function	ATP hydrolysis activity
I	0030071	biological_process	regulation of mitotic metaphase/anaphase transition
I	0030177	biological_process	positive regulation of Wnt signaling pathway
I	0030308	biological_process	negative regulation of cell growth
I	0030957	molecular_function	Tat protein binding
I	0031492	molecular_function	nucleosomal DNA binding
I	0031507	biological_process	heterochromatin formation
I	0032991	cellular_component	protein-containing complex
I	0042393	molecular_function	histone binding
I	0042802	molecular_function	identical protein binding
I	0043923	biological_process	host-mediated activation of viral transcription
I	0045582	biological_process	positive regulation of T cell differentiation
I	0045596	biological_process	negative regulation of cell differentiation
I	0045597	biological_process	positive regulation of cell differentiation
I	0045663	biological_process	positive regulation of myoblast differentiation
I	0045815	biological_process	transcription initiation-coupled chromatin remodeling
I	0045892	biological_process	negative regulation of DNA-templated transcription
I	0045893	biological_process	positive regulation of DNA-templated transcription
I	0045944	biological_process	positive regulation of transcription by RNA polymerase II
I	0050681	molecular_function	nuclear androgen receptor binding
I	0060766	biological_process	negative regulation of androgen receptor signaling pathway
I	0070182	molecular_function	DNA polymerase binding
I	0070316	biological_process	regulation of G0 to G1 transition
I	0071564	cellular_component	npBAF complex
I	0071565	cellular_component	nBAF complex
I	0120162	biological_process	positive regulation of cold-induced thermogenesis
I	0140658	molecular_function	ATP-dependent chromatin remodeler activity
I	0140750	molecular_function	nucleosome array spacer activity
I	1901798	biological_process	positive regulation of signal transduction by p53 class mediator
I	1901838	biological_process	positive regulation of transcription of nucleolar large rRNA by RNA polymerase I
I	1902459	biological_process	positive regulation of stem cell population maintenance
I	1902661	biological_process	positive regulation of glucose mediated signaling pathway
I	1902895	biological_process	positive regulation of miRNA transcription
I	2000045	biological_process	regulation of G1/S transition of mitotic cell cycle
I	2000781	biological_process	positive regulation of double-strand break repair
I	2000819	biological_process	regulation of nucleotide-excision repair
J	0000723	biological_process	telomere maintenance
J	0000776	cellular_component	kinetochore
J	0000785	cellular_component	chromatin
J	0003407	biological_process	neural retina development
J	0003682	molecular_function	chromatin binding
J	0003713	molecular_function	transcription coactivator activity
J	0005515	molecular_function	protein binding
J	0005634	cellular_component	nucleus
J	0005654	cellular_component	nucleoplasm
J	0005886	cellular_component	plasma membrane
J	0006275	biological_process	regulation of DNA replication
J	0006281	biological_process	DNA repair
J	0006282	biological_process	regulation of DNA repair
J	0006310	biological_process	DNA recombination
J	0006325	biological_process	chromatin organization
J	0006338	biological_process	chromatin remodeling
J	0006351	biological_process	DNA-templated transcription
J	0006355	biological_process	regulation of DNA-templated transcription
J	0006357	biological_process	regulation of transcription by RNA polymerase II
J	0006974	biological_process	DNA damage response
J	0007165	biological_process	signal transduction
J	0007399	biological_process	nervous system development
J	0008284	biological_process	positive regulation of cell population proliferation
J	0016363	cellular_component	nuclear matrix
J	0016514	cellular_component	SWI/SNF complex
J	0021510	biological_process	spinal cord development
J	0030071	biological_process	regulation of mitotic metaphase/anaphase transition
J	0031011	cellular_component	Ino80 complex
J	0031492	molecular_function	nucleosomal DNA binding
J	0032991	cellular_component	protein-containing complex
J	0033044	biological_process	regulation of chromosome organization
J	0035267	cellular_component	NuA4 histone acetyltransferase complex
J	0042981	biological_process	regulation of apoptotic process
J	0045582	biological_process	positive regulation of T cell differentiation
J	0045596	biological_process	negative regulation of cell differentiation
J	0045597	biological_process	positive regulation of cell differentiation
J	0045663	biological_process	positive regulation of myoblast differentiation
J	0045739	biological_process	positive regulation of DNA repair
J	0045893	biological_process	positive regulation of DNA-templated transcription
J	0045995	biological_process	regulation of embryonic development
J	0048731	biological_process	system development
J	0051726	biological_process	regulation of cell cycle
J	0060382	biological_process	regulation of DNA strand elongation
J	0070316	biological_process	regulation of G0 to G1 transition
J	0071564	cellular_component	npBAF complex
J	1902459	biological_process	positive regulation of stem cell population maintenance
J	1904507	biological_process	positive regulation of telomere maintenance in response to DNA damage
J	1905168	biological_process	positive regulation of double-strand break repair via homologous recombination
J	2000045	biological_process	regulation of G1/S transition of mitotic cell cycle
J	2000779	biological_process	regulation of double-strand break repair
J	2000781	biological_process	positive regulation of double-strand break repair
J	2000819	biological_process	regulation of nucleotide-excision repair
K	0000166	molecular_function	nucleotide binding
K	0000776	cellular_component	kinetochore
K	0000785	cellular_component	chromatin
K	0001738	biological_process	morphogenesis of a polarized epithelium
K	0005200	molecular_function	structural constituent of cytoskeleton
K	0005515	molecular_function	protein binding
K	0005524	molecular_function	ATP binding
K	0005615	cellular_component	extracellular space
K	0005634	cellular_component	nucleus
K	0005654	cellular_component	nucleoplasm
K	0005737	cellular_component	cytoplasm
K	0005829	cellular_component	cytosol
K	0005856	cellular_component	cytoskeleton
K	0005884	cellular_component	actin filament
K	0005886	cellular_component	plasma membrane
K	0005903	cellular_component	brush border
K	0005911	cellular_component	cell-cell junction
K	0005912	cellular_component	adherens junction
K	0005925	cellular_component	focal adhesion
K	0006338	biological_process	chromatin remodeling
K	0006357	biological_process	regulation of transcription by RNA polymerase II
K	0007010	biological_process	cytoskeleton organization
K	0007020	biological_process	microtubule nucleation
K	0007163	biological_process	establishment or maintenance of cell polarity
K	0007409	biological_process	axonogenesis
K	0008284	biological_process	positive regulation of cell population proliferation
K	0015629	cellular_component	actin cytoskeleton
K	0016020	cellular_component	membrane
K	0016363	cellular_component	nuclear matrix
K	0016787	molecular_function	hydrolase activity
K	0016887	molecular_function	ATP hydrolysis activity
K	0019894	molecular_function	kinesin binding
K	0019901	molecular_function	protein kinase binding
K	0021762	biological_process	substantia nigra development
K	0030027	cellular_component	lamellipodium
K	0030071	biological_process	regulation of mitotic metaphase/anaphase transition
K	0030235	molecular_function	nitric-oxide synthase regulator activity
K	0030424	cellular_component	axon
K	0030863	cellular_component	cortical cytoskeleton
K	0030957	molecular_function	Tat protein binding
K	0031492	molecular_function	nucleosomal DNA binding
K	0031982	cellular_component	vesicle
K	0032991	cellular_component	protein-containing complex
K	0034333	biological_process	adherens junction assembly
K	0035267	cellular_component	NuA4 histone acetyltransferase complex
K	0035633	biological_process	maintenance of blood-brain barrier
K	0036464	cellular_component	cytoplasmic ribonucleoprotein granule
K	0042802	molecular_function	identical protein binding
K	0042981	biological_process	regulation of apoptotic process
K	0043296	cellular_component	apical junction complex
K	0044305	cellular_component	calyx of Held
K	0045176	biological_process	apical protein localization
K	0045202	cellular_component	synapse
K	0045582	biological_process	positive regulation of T cell differentiation
K	0045596	biological_process	negative regulation of cell differentiation
K	0045597	biological_process	positive regulation of cell differentiation
K	0045663	biological_process	positive regulation of myoblast differentiation
K	0045893	biological_process	positive regulation of DNA-templated transcription
K	0048156	molecular_function	tau protein binding
K	0048870	biological_process	cell motility
K	0050998	molecular_function	nitric-oxide synthase binding
K	0051621	biological_process	regulation of norepinephrine uptake
K	0051623	biological_process	positive regulation of norepinephrine uptake
K	0051726	biological_process	regulation of cell cycle
K	0070062	cellular_component	extracellular exosome
K	0070160	cellular_component	tight junction
K	0070316	biological_process	regulation of G0 to G1 transition
K	0070527	biological_process	platelet aggregation
K	0071896	biological_process	protein localization to adherens junction
K	0072562	cellular_component	blood microparticle
K	0072749	biological_process	cellular response to cytochalasin B
K	0097433	cellular_component	dense body
K	0098685	cellular_component	Schaffer collateral - CA1 synapse
K	0098793	cellular_component	presynapse
K	0098871	cellular_component	postsynaptic actin cytoskeleton
K	0098973	molecular_function	structural constituent of postsynaptic actin cytoskeleton
K	0098974	biological_process	postsynaptic actin cytoskeleton organization
K	0098978	cellular_component	glutamatergic synapse
K	0141108	molecular_function	transporter regulator activity
K	0150111	biological_process	regulation of transepithelial transport
K	1900242	biological_process	regulation of synaptic vesicle endocytosis
K	1902459	biological_process	positive regulation of stem cell population maintenance
K	1903076	biological_process	regulation of protein localization to plasma membrane
K	1905168	biological_process	positive regulation of double-strand break repair via homologous recombination
K	1990904	cellular_component	ribonucleoprotein complex
K	2000045	biological_process	regulation of G1/S transition of mitotic cell cycle
K	2000779	biological_process	regulation of double-strand break repair
K	2000781	biological_process	positive regulation of double-strand break repair
K	2000819	biological_process	regulation of nucleotide-excision repair
L	0003677	molecular_function	DNA binding
L	0006338	biological_process	chromatin remodeling
L	0016514	cellular_component	SWI/SNF complex
L	0035060	cellular_component	brahma complex
M	0000228	cellular_component	nuclear chromosome
M	0006338	biological_process	chromatin remodeling
N	0000776	cellular_component	kinetochore
N	0000785	cellular_component	chromatin
N	0003713	molecular_function	transcription coactivator activity
N	0005515	molecular_function	protein binding
N	0005634	cellular_component	nucleus
N	0005654	cellular_component	nucleoplasm
N	0006325	biological_process	chromatin organization
N	0006337	biological_process	nucleosome disassembly
N	0006338	biological_process	chromatin remodeling
N	0006351	biological_process	DNA-templated transcription
N	0006355	biological_process	regulation of DNA-templated transcription
N	0006357	biological_process	regulation of transcription by RNA polymerase II
N	0007399	biological_process	nervous system development
N	0016363	cellular_component	nuclear matrix
N	0016514	cellular_component	SWI/SNF complex
N	0030071	biological_process	regulation of mitotic metaphase/anaphase transition
N	0031492	molecular_function	nucleosomal DNA binding
N	0032991	cellular_component	protein-containing complex
N	0042393	molecular_function	histone binding
N	0045582	biological_process	positive regulation of T cell differentiation
N	0045597	biological_process	positive regulation of cell differentiation
N	0045663	biological_process	positive regulation of myoblast differentiation
N	0045892	biological_process	negative regulation of DNA-templated transcription
N	0045893	biological_process	positive regulation of DNA-templated transcription
N	0070316	biological_process	regulation of G0 to G1 transition
N	0071564	cellular_component	npBAF complex
N	0071565	cellular_component	nBAF complex
N	2000045	biological_process	regulation of G1/S transition of mitotic cell cycle
N	2000781	biological_process	positive regulation of double-strand break repair
N	2000819	biological_process	regulation of nucleotide-excision repair
O	0000776	cellular_component	kinetochore
O	0000785	cellular_component	chromatin
O	0003713	molecular_function	transcription coactivator activity
O	0005515	molecular_function	protein binding
O	0005634	cellular_component	nucleus
O	0005654	cellular_component	nucleoplasm
O	0006325	biological_process	chromatin organization
O	0006337	biological_process	nucleosome disassembly
O	0006338	biological_process	chromatin remodeling
O	0006351	biological_process	DNA-templated transcription
O	0006355	biological_process	regulation of DNA-templated transcription
O	0006357	biological_process	regulation of transcription by RNA polymerase II
O	0007399	biological_process	nervous system development
O	0016363	cellular_component	nuclear matrix
O	0016514	cellular_component	SWI/SNF complex
O	0030071	biological_process	regulation of mitotic metaphase/anaphase transition
O	0031492	molecular_function	nucleosomal DNA binding
O	0032991	cellular_component	protein-containing complex
O	0042393	molecular_function	histone binding
O	0045582	biological_process	positive regulation of T cell differentiation
O	0045597	biological_process	positive regulation of cell differentiation
O	0045663	biological_process	positive regulation of myoblast differentiation
O	0045892	biological_process	negative regulation of DNA-templated transcription
O	0045893	biological_process	positive regulation of DNA-templated transcription
O	0070316	biological_process	regulation of G0 to G1 transition
O	0071564	cellular_component	npBAF complex
O	0071565	cellular_component	nBAF complex
O	2000045	biological_process	regulation of G1/S transition of mitotic cell cycle
O	2000781	biological_process	positive regulation of double-strand break repair
O	2000819	biological_process	regulation of nucleotide-excision repair
P	0000776	cellular_component	kinetochore
P	0000785	cellular_component	chromatin
P	0003682	molecular_function	chromatin binding
P	0003712	molecular_function	transcription coregulator activity
P	0003713	molecular_function	transcription coactivator activity
P	0005102	molecular_function	signaling receptor binding
P	0005515	molecular_function	protein binding
P	0005634	cellular_component	nucleus
P	0005654	cellular_component	nucleoplasm
P	0006325	biological_process	chromatin organization
P	0006337	biological_process	nucleosome disassembly
P	0006338	biological_process	chromatin remodeling
P	0006357	biological_process	regulation of transcription by RNA polymerase II
P	0007399	biological_process	nervous system development
P	0008284	biological_process	positive regulation of cell population proliferation
P	0016363	cellular_component	nuclear matrix
P	0016514	cellular_component	SWI/SNF complex
P	0030071	biological_process	regulation of mitotic metaphase/anaphase transition
P	0045582	biological_process	positive regulation of T cell differentiation
P	0045596	biological_process	negative regulation of cell differentiation
P	0045597	biological_process	positive regulation of cell differentiation
P	0045663	biological_process	positive regulation of myoblast differentiation
P	0045815	biological_process	transcription initiation-coupled chromatin remodeling
P	0045893	biological_process	positive regulation of DNA-templated transcription
P	0060090	molecular_function	molecular adaptor activity
P	0070316	biological_process	regulation of G0 to G1 transition
P	0071398	biological_process	cellular response to fatty acid
P	0071564	cellular_component	npBAF complex
P	0071565	cellular_component	nBAF complex
P	1902459	biological_process	positive regulation of stem cell population maintenance
P	2000045	biological_process	regulation of G1/S transition of mitotic cell cycle
P	2000781	biological_process	positive regulation of double-strand break repair
P	2000819	biological_process	regulation of nucleotide-excision repair
Q	0000228	cellular_component	nuclear chromosome
Q	0000776	cellular_component	kinetochore
Q	0000785	cellular_component	chromatin
Q	0003677	molecular_function	DNA binding
Q	0003682	molecular_function	chromatin binding
Q	0003713	molecular_function	transcription coactivator activity
Q	0003723	molecular_function	RNA binding
Q	0005515	molecular_function	protein binding
Q	0005634	cellular_component	nucleus
Q	0005654	cellular_component	nucleoplasm
Q	0006325	biological_process	chromatin organization
Q	0006337	biological_process	nucleosome disassembly
Q	0006338	biological_process	chromatin remodeling
Q	0006357	biological_process	regulation of transcription by RNA polymerase II
Q	0007399	biological_process	nervous system development
Q	0008080	molecular_function	N-acetyltransferase activity
Q	0016363	cellular_component	nuclear matrix
Q	0016514	cellular_component	SWI/SNF complex
Q	0016922	molecular_function	nuclear receptor binding
Q	0030071	biological_process	regulation of mitotic metaphase/anaphase transition
Q	0031492	molecular_function	nucleosomal DNA binding
Q	0032991	cellular_component	protein-containing complex
Q	0045582	biological_process	positive regulation of T cell differentiation
Q	0045597	biological_process	positive regulation of cell differentiation
Q	0045663	biological_process	positive regulation of myoblast differentiation
Q	0045892	biological_process	negative regulation of DNA-templated transcription
Q	0045893	biological_process	positive regulation of DNA-templated transcription
Q	0070316	biological_process	regulation of G0 to G1 transition
Q	0071564	cellular_component	npBAF complex
Q	0071565	cellular_component	nBAF complex
Q	1902459	biological_process	positive regulation of stem cell population maintenance
Q	2000045	biological_process	regulation of G1/S transition of mitotic cell cycle
Q	2000781	biological_process	positive regulation of double-strand break repair
Q	2000819	biological_process	regulation of nucleotide-excision repair

Functional Information from PDB Data

site_id	AC1
Number of Residues	4
Details	binding site for residue ZN L 2301

Chain	Residue
L	HIS2019
L	HIS2021
L	HIS2090
L	CYS2094

Functional Information from PROSITE/UniProt

site_id	PS00406
Number of Residues	11
Details	ACTINS_1 Actins signature 1. YVGDEAQs.KRG

Chain	Residue	Details
K	TYR53-GLY63

site_id	PS00432
Number of Residues	9
Details	ACTINS_2 Actins signature 2. WISKqEYDE

Chain	Residue	Details
K	TRP356-GLU364

site_id	PS01132
Number of Residues	13
Details	ACTINS_ACT_LIKE Actins and actin-related proteins signature. LLTEApLNPkaNR

Chain	Residue	Details
K	LEU104-ARG116

site_id	PS00322
Number of Residues	7
Details	HISTONE_H3_1 Histone H3 signature 1. KAPRKQL

Chain	Residue	Details
A	LYS11-LEU17

site_id	PS00959
Number of Residues	9
Details	HISTONE_H3_2 Histone H3 signature 2. PFqRLVREI

Chain	Residue	Details
A	PRO63-ILE71

site_id	PS00047
Number of Residues	5
Details	HISTONE_H4 Histone H4 signature. GAKRH

Chain	Residue	Details
B	GLY14-HIS18

site_id	PS00357
Number of Residues	23
Details	HISTONE_H2B Histone H2B signature. REIQTagRlLLpGELaKHAVSEG

Chain	Residue	Details
D	ARG89-GLY111

site_id	PS00633
Number of Residues	58
Details	BROMODOMAIN_1 Bromodomain signature. SevFiqlpSrkelp..EYYelIrkpVdfkkIkerirnhk..Yrslndlekdvml.LcqNAqtF

Chain	Residue	Details
I	SER1482-PHE1539

site_id	PS00046
Number of Residues	7
Details	HISTONE_H2A Histone H2A signature. AGLqFPV

Chain	Residue	Details
C	ALA21-VAL27

site_id	PS00141
Number of Residues	12
Details	ASP_PROTEASE Eukaryotic and viral aspartyl proteases active site. LILDSGATHTTA

Chain	Residue	Details
J	LEU168-ALA179

site_id	PS00028
Number of Residues	22
Details	ZINC_FINGER_C2H2_1 Zinc finger C2H2 type domain signature. Cdi..CgkrYknrpglsyHyahs.H

Chain	Residue	Details
R	CYS112-HIS133

site_id	PS01359
Number of Residues	80
Details	ZF_PHD_1 Zinc finger PHD-type signature. CsdCgrsghpsclqftpvmmaavktyrwqcieckccnicgtsenddql.LfCdd..Cdrg.YHmyCltpsmseppegs.................................WsChlC

Chain	Residue	Details
R	CYS196-CYS275

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	4
Details	Modified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"UniProtKB","id":"P84244","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

site_id	SWS_FT_FI2
Number of Residues	2
Details	Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P84243","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

site_id	SWS_FT_FI3
Number of Residues	2
Details	Modified residue: {"description":"N6-methylated lysine","evidences":[{"source":"UniProtKB","id":"P84243","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

site_id	SWS_FT_FI4
Number of Residues	2
Details	Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"UniProtKB","id":"P84243","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

site_id	SWS_FT_FI5
Number of Residues	2
Details	Modified residue: {"description":"N6-glutaryllysine; alternate","evidences":[{"source":"UniProtKB","id":"P84243","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

site_id	SWS_FT_FI6
Number of Residues	2
Details	Modified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"UniProtKB","id":"P84243","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

site_id	SWS_FT_FI7
Number of Residues	4
Details	Modified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"UniProtKB","id":"P62805","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

site_id	SWS_FT_FI8
Number of Residues	4
Details	Modified residue: {"description":"N6-propionyllysine; alternate","evidences":[{"source":"UniProtKB","id":"P62805","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

site_id	SWS_FT_FI9
Number of Residues	2
Details	Modified residue: {"description":"Phosphoserine; by PAK2","evidences":[{"source":"UniProtKB","id":"P62805","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

site_id	SWS_FT_FI10
Number of Residues	4
Details	Modified residue: {"description":"Phosphotyrosine","evidences":[{"source":"UniProtKB","id":"P62805","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

site_id	SWS_FT_FI11
Number of Residues	2
Details	Modified residue: {"description":"N6-glutaryllysine; alternate","evidences":[{"source":"UniProtKB","id":"P62805","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

site_id	SWS_FT_FI12
Number of Residues	2
Details	Modified residue: {"description":"N6-succinyllysine","evidences":[{"source":"UniProtKB","id":"P62805","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

site_id	SWS_FT_FI13
Number of Residues	2
Details	Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in UFM1); alternate","evidences":[{"source":"UniProtKB","id":"P62805","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

site_id	SWS_FT_FI14
Number of Residues	4
Details	Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate","evidences":[{"source":"UniProtKB","id":"P62805","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

site_id	SWS_FT_FI15
Number of Residues	2
Details	Modified residue: {"description":"N6-(2-hydroxyisobutyryl)lysine; alternate","evidences":[{"source":"UniProtKB","id":"P0C0S8","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

site_id	SWS_FT_FI16
Number of Residues	4
Details	Modified residue: {"description":"N6-(2-hydroxyisobutyryl)lysine","evidences":[{"source":"UniProtKB","id":"P0C0S8","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

site_id	SWS_FT_FI17
Number of Residues	2
Details	Modified residue: {"description":"N6-succinyllysine","evidences":[{"source":"UniProtKB","id":"P0C0S8","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

site_id	SWS_FT_FI18
Number of Residues	2
Details	Modified residue: {"description":"N5-methylglutamine","evidences":[{"evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

site_id	SWS_FT_FI19
Number of Residues	2
Details	Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

site_id	SWS_FT_FI20
Number of Residues	2
Details	Glycosylation: {"description":"O-linked (GlcNAc) serine","evidences":[{"source":"UniProtKB","id":"P62807","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

site_id	SWS_FT_FI21
Number of Residues	4
Details	Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"UniProtKB","id":"P0C1H4","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

site_id	SWS_FT_FI22
Number of Residues	79
Details	Region: {"description":"Sufficient for interaction with DLX1","evidences":[{"source":"UniProtKB","id":"Q3TKT4","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

site_id	SWS_FT_FI23
Number of Residues	3
Details	Motif: {"description":"DEGH box"}

Chain

Residue

Details

site_id	SWS_FT_FI24
Number of Residues	7
Details	Binding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU00541","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

site_id	SWS_FT_FI25
Number of Residues	1
Details	Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"PubMed","id":"19690332","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

site_id	SWS_FT_FI26
Number of Residues	2
Details	Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)","evidences":[{"source":"PubMed","id":"28112733","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

site_id	SWS_FT_FI27
Number of Residues	1
Details	Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

site_id	SWS_FT_FI28
Number of Residues	1
Details	Modified residue: {"description":"N-acetylaspartate; in Actin, cytoplasmic 1, N-terminally processed","evidences":[{"source":"PubMed","id":"29581253","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"30028079","evidenceCode":"ECO:0000269"},{"source":"Reference","evidenceCode":"ECO:0000269","citation":{"citationType":"submission","publicationDate":"JUN-2005","submissionDatabase":"UniProtKB","authors":["Bienvenut W.V."]}},{"source":"PubMed","id":"19413330","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"22223895","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"22814378","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"25944712","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

site_id	SWS_FT_FI29
Number of Residues	1
Details	Modified residue: {"description":"N6-methyllysine","evidences":[{"source":"PubMed","id":"23673617","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

site_id	SWS_FT_FI30
Number of Residues	2
Details	Cross-link: {"description":"(Microbial infection) Isoglutamyl lysine isopeptide (Glu-Lys) (interchain with K-50); by Vibrio toxins RtxA and VgrG1","evidences":[{"source":"PubMed","id":"19015515","evidenceCode":"ECO:0000305"}]}

Chain

Residue

Details

site_id	SWS_FT_FI31
Number of Residues	12
Details	Motif: {"description":"LXXLL"}

Chain

Residue

Details

site_id	SWS_FT_FI32
Number of Residues	59
Details	Repeat: {"description":"1"}

Chain

Residue

Details

site_id	SWS_FT_FI33
Number of Residues	60
Details	Repeat: {"description":"2"}

Chain

Residue

Details

site_id	SWS_FT_FI34
Number of Residues	60
Details	Region: {"description":"HIV-1 integrase-binding"}

Chain

Residue

Details

site_id	SWS_FT_FI35
Number of Residues	59
Details	Region: {"description":"MYC-binding","evidences":[{"source":"PubMed","id":"10208879","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

site_id	SWS_FT_FI36
Number of Residues	14
Details	Region: {"description":"Interaction with PPP1R15A","evidences":[{"source":"PubMed","id":"12016208","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

site_id	SWS_FT_FI37
Number of Residues	82
Details	Coiled coil: {"evidences":[{"evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

site_id	SWS_FT_FI38
Number of Residues	97
Details	Domain: {"description":"SWIRM","evidences":[{"source":"PROSITE-ProRule","id":"PRU00247","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

site_id	SWS_FT_FI39
Number of Residues	2
Details	Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)","evidences":[{"source":"PubMed","id":"25755297","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"28112733","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

site_id	SWS_FT_FI40
Number of Residues	1
Details	Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"19690332","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		PDB format (full)
		Validation report (PDF)