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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

6LQQ

Cryo-EM structure of 90S small subunit preribosomes in transition states (State B)

This is a non-PDB format compatible entry.
Functional Information from GO Data
ChainGOidnamespacecontents
3B0000451biological_processrRNA 2'-O-methylation
3B0000452biological_processsnoRNA guided rRNA 2'-O-methylation
3B0000494biological_processbox C/D sno(s)RNA 3'-end processing
3B0003723molecular_functionRNA binding
3B0005515molecular_functionprotein binding
3B0005654cellular_componentnucleoplasm
3B0005730cellular_componentnucleolus
3B0006338biological_processchromatin remodeling
3B0006356biological_processregulation of transcription by RNA polymerase I
3B0006364biological_processrRNA processing
3B0008168molecular_functionmethyltransferase activity
3B0008171molecular_functionO-methyltransferase activity
3B0008649molecular_functionrRNA methyltransferase activity
3B0016740molecular_functiontransferase activity
3B0030490biological_processmaturation of SSU-rRNA
3B0030686cellular_component90S preribosome
3B0031167biological_processrRNA methylation
3B0031428cellular_componentbox C/D methylation guide snoRNP complex
3B0032040cellular_componentsmall-subunit processome
3B0032259biological_processmethylation
3B0042254biological_processribosome biogenesis
3B1990259molecular_functionhistone H2AQ104 methyltransferase activity
3B1990904cellular_componentribonucleoprotein complex
3C0000451biological_processrRNA 2'-O-methylation
3C0000452biological_processsnoRNA guided rRNA 2'-O-methylation
3C0000494biological_processbox C/D sno(s)RNA 3'-end processing
3C0003723molecular_functionRNA binding
3C0005515molecular_functionprotein binding
3C0005654cellular_componentnucleoplasm
3C0005730cellular_componentnucleolus
3C0006338biological_processchromatin remodeling
3C0006356biological_processregulation of transcription by RNA polymerase I
3C0006364biological_processrRNA processing
3C0008168molecular_functionmethyltransferase activity
3C0008171molecular_functionO-methyltransferase activity
3C0008649molecular_functionrRNA methyltransferase activity
3C0016740molecular_functiontransferase activity
3C0030490biological_processmaturation of SSU-rRNA
3C0030686cellular_component90S preribosome
3C0031167biological_processrRNA methylation
3C0031428cellular_componentbox C/D methylation guide snoRNP complex
3C0032040cellular_componentsmall-subunit processome
3C0032259biological_processmethylation
3C0042254biological_processribosome biogenesis
3C1990259molecular_functionhistone H2AQ104 methyltransferase activity
3C1990904cellular_componentribonucleoprotein complex
3D0000154biological_processrRNA modification
3D0000452biological_processsnoRNA guided rRNA 2'-O-methylation
3D0000494biological_processbox C/D sno(s)RNA 3'-end processing
3D0003729molecular_functionmRNA binding
3D0005515molecular_functionprotein binding
3D0005634cellular_componentnucleus
3D0005654cellular_componentnucleoplasm
3D0005730cellular_componentnucleolus
3D0006364biological_processrRNA processing
3D0030490biological_processmaturation of SSU-rRNA
3D0030515molecular_functionsnoRNA binding
3D0030686cellular_component90S preribosome
3D0031428cellular_componentbox C/D methylation guide snoRNP complex
3D0032040cellular_componentsmall-subunit processome
3D0042254biological_processribosome biogenesis
3D1990904cellular_componentribonucleoprotein complex
3E0000447biological_processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
3E0000452biological_processsnoRNA guided rRNA 2'-O-methylation
3E0000472biological_processendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
3E0000480biological_processendonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
3E0000494biological_processbox C/D sno(s)RNA 3'-end processing
3E0003729molecular_functionmRNA binding
3E0005515molecular_functionprotein binding
3E0005654cellular_componentnucleoplasm
3E0005730cellular_componentnucleolus
3E0006364biological_processrRNA processing
3E0017069molecular_functionsnRNA binding
3E0030490biological_processmaturation of SSU-rRNA
3E0030515molecular_functionsnoRNA binding
3E0030686cellular_component90S preribosome
3E0031428cellular_componentbox C/D methylation guide snoRNP complex
3E0032040cellular_componentsmall-subunit processome
3E0042254biological_processribosome biogenesis
3E1902570biological_processprotein localization to nucleolus
3E1990904cellular_componentribonucleoprotein complex
3F0000447biological_processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
3F0000472biological_processendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
3F0000480biological_processendonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
3F0005515molecular_functionprotein binding
3F0005654cellular_componentnucleoplasm
3F0005730cellular_componentnucleolus
3F0006364biological_processrRNA processing
3F0030490biological_processmaturation of SSU-rRNA
3F0030515molecular_functionsnoRNA binding
3F0030686cellular_component90S preribosome
3F0031428cellular_componentbox C/D methylation guide snoRNP complex
3F0032040cellular_componentsmall-subunit processome
3F0034511molecular_functionU3 snoRNA binding
3F0042254biological_processribosome biogenesis
3F1990904cellular_componentribonucleoprotein complex
3G0000245biological_processspliceosomal complex assembly
3G0000398biological_processmRNA splicing, via spliceosome
3G0000452biological_processsnoRNA guided rRNA 2'-O-methylation
3G0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
3G0000494biological_processbox C/D sno(s)RNA 3'-end processing
3G0003723molecular_functionRNA binding
3G0005515molecular_functionprotein binding
3G0005634cellular_componentnucleus
3G0005654cellular_componentnucleoplasm
3G0005681cellular_componentspliceosomal complex
3G0005687cellular_componentU4 snRNP
3G0005730cellular_componentnucleolus
3G0006364biological_processrRNA processing
3G0006397biological_processmRNA processing
3G0008380biological_processRNA splicing
3G0030490biological_processmaturation of SSU-rRNA
3G0030621molecular_functionU4 snRNA binding
3G0031428cellular_componentbox C/D methylation guide snoRNP complex
3G0032040cellular_componentsmall-subunit processome
3G0034511molecular_functionU3 snoRNA binding
3G0042254biological_processribosome biogenesis
3G0046540cellular_componentU4/U6 x U5 tri-snRNP complex
3G0071001cellular_componentU4/U6 snRNP
3G0071011cellular_componentprecatalytic spliceosome
3G1990904cellular_componentribonucleoprotein complex
3H0000245biological_processspliceosomal complex assembly
3H0000398biological_processmRNA splicing, via spliceosome
3H0000452biological_processsnoRNA guided rRNA 2'-O-methylation
3H0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
3H0000494biological_processbox C/D sno(s)RNA 3'-end processing
3H0003723molecular_functionRNA binding
3H0005515molecular_functionprotein binding
3H0005634cellular_componentnucleus
3H0005654cellular_componentnucleoplasm
3H0005681cellular_componentspliceosomal complex
3H0005687cellular_componentU4 snRNP
3H0005730cellular_componentnucleolus
3H0006364biological_processrRNA processing
3H0006397biological_processmRNA processing
3H0008380biological_processRNA splicing
3H0030490biological_processmaturation of SSU-rRNA
3H0030621molecular_functionU4 snRNA binding
3H0031428cellular_componentbox C/D methylation guide snoRNP complex
3H0032040cellular_componentsmall-subunit processome
3H0034511molecular_functionU3 snoRNA binding
3H0042254biological_processribosome biogenesis
3H0046540cellular_componentU4/U6 x U5 tri-snRNP complex
3H0071001cellular_componentU4/U6 snRNP
3H0071011cellular_componentprecatalytic spliceosome
3H1990904cellular_componentribonucleoprotein complex
5B0000447biological_processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
5B0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
5B0000472biological_processendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
5B0005730cellular_componentnucleolus
5B0006364biological_processrRNA processing
5B0030490biological_processmaturation of SSU-rRNA
5B0030515molecular_functionsnoRNA binding
5B0030686cellular_component90S preribosome
5B0032040cellular_componentsmall-subunit processome
5B0034511molecular_functionU3 snoRNA binding
5B0042254biological_processribosome biogenesis
5B1990904cellular_componentribonucleoprotein complex
5C0000447biological_processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
5C0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
5C0000472biological_processendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
5C0000480biological_processendonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
5C0003674molecular_functionmolecular_function
5C0005515molecular_functionprotein binding
5C0005654cellular_componentnucleoplasm
5C0005730cellular_componentnucleolus
5C0006364biological_processrRNA processing
5C0030490biological_processmaturation of SSU-rRNA
5C0030686cellular_component90S preribosome
5C0030688cellular_componentpreribosome, small subunit precursor
5C0032040cellular_componentsmall-subunit processome
5C0042254biological_processribosome biogenesis
5C1990904cellular_componentribonucleoprotein complex
5D0000447biological_processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
5D0000472biological_processendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
5D0000480biological_processendonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
5D0003674molecular_functionmolecular_function
5D0005654cellular_componentnucleoplasm
5D0005730cellular_componentnucleolus
5D0005732cellular_componentsno(s)RNA-containing ribonucleoprotein complex
5D0006364biological_processrRNA processing
5D0006412biological_processtranslation
5D0030490biological_processmaturation of SSU-rRNA
5D0032040cellular_componentsmall-subunit processome
5D0042254biological_processribosome biogenesis
5D1990904cellular_componentribonucleoprotein complex
5E0000447biological_processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
5E0000472biological_processendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
5E0000480biological_processendonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
5E0003674molecular_functionmolecular_function
5E0005515molecular_functionprotein binding
5E0005634cellular_componentnucleus
5E0005654cellular_componentnucleoplasm
5E0005730cellular_componentnucleolus
5E0005732cellular_componentsno(s)RNA-containing ribonucleoprotein complex
5E0006364biological_processrRNA processing
5E0030490biological_processmaturation of SSU-rRNA
5E0030686cellular_component90S preribosome
5E0032040cellular_componentsmall-subunit processome
5E0034457cellular_componentMpp10 complex
5E0042254biological_processribosome biogenesis
5E0042802molecular_functionidentical protein binding
5E1990904cellular_componentribonucleoprotein complex
5F0003723molecular_functionRNA binding
5F0005515molecular_functionprotein binding
5F0005654cellular_componentnucleoplasm
5F0005730cellular_componentnucleolus
5F0006364biological_processrRNA processing
5F0019843molecular_functionrRNA binding
5F0030490biological_processmaturation of SSU-rRNA
5F0030515molecular_functionsnoRNA binding
5F0030686cellular_component90S preribosome
5F0032040cellular_componentsmall-subunit processome
5F0034337biological_processRNA folding
5F0034457cellular_componentMpp10 complex
5F0042254biological_processribosome biogenesis
5F0042274biological_processribosomal small subunit biogenesis
5F0140691molecular_functionRNA folding chaperone
5F1990904cellular_componentribonucleoprotein complex
5G0005515molecular_functionprotein binding
5G0005654cellular_componentnucleoplasm
5G0005730cellular_componentnucleolus
5G0006364biological_processrRNA processing
5G0019843molecular_functionrRNA binding
5G0030490biological_processmaturation of SSU-rRNA
5G0030515molecular_functionsnoRNA binding
5G0030686cellular_component90S preribosome
5G0032040cellular_componentsmall-subunit processome
5G0034337biological_processRNA folding
5G0034457cellular_componentMpp10 complex
5G0042134molecular_functionrRNA primary transcript binding
5G0042254biological_processribosome biogenesis
5G0042274biological_processribosomal small subunit biogenesis
5G0043047molecular_functionsingle-stranded telomeric DNA binding
5G0140691molecular_functionRNA folding chaperone
5G1990904cellular_componentribonucleoprotein complex
5H0000447biological_processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
5H0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
5H0000472biological_processendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
5H0000480biological_processendonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
5H0003674molecular_functionmolecular_function
5H0005515molecular_functionprotein binding
5H0005634cellular_componentnucleus
5H0005654cellular_componentnucleoplasm
5H0005730cellular_componentnucleolus
5H0006364biological_processrRNA processing
5H0030490biological_processmaturation of SSU-rRNA
5H0032040cellular_componentsmall-subunit processome
5H0042254biological_processribosome biogenesis
5H0042802molecular_functionidentical protein binding
5H1990904cellular_componentribonucleoprotein complex
5I0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
5I0003729molecular_functionmRNA binding
5I0005654cellular_componentnucleoplasm
5I0005730cellular_componentnucleolus
5I0006364biological_processrRNA processing
5I0030490biological_processmaturation of SSU-rRNA
5I0030686cellular_component90S preribosome
5I0032040cellular_componentsmall-subunit processome
5I0042254biological_processribosome biogenesis
5I1990904cellular_componentribonucleoprotein complex
5J0000447biological_processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
5J0000472biological_processendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
5J0000480biological_processendonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
5J0003674molecular_functionmolecular_function
5J0005634cellular_componentnucleus
5J0005730cellular_componentnucleolus
5J0006364biological_processrRNA processing
5J0006396biological_processRNA processing
5J0042254biological_processribosome biogenesis
5K0000447biological_processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
5K0000472biological_processendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
5K0000480biological_processendonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
5K0004521molecular_functionRNA endonuclease activity
5K0004540molecular_functionRNA nuclease activity
5K0005515molecular_functionprotein binding
5K0005654cellular_componentnucleoplasm
5K0005730cellular_componentnucleolus
5K0006364biological_processrRNA processing
5K0008270molecular_functionzinc ion binding
5K0030490biological_processmaturation of SSU-rRNA
5K0032040cellular_componentsmall-subunit processome
5K0042254biological_processribosome biogenesis
5K0042274biological_processribosomal small subunit biogenesis
A40000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
A40003674molecular_functionmolecular_function
A40005515molecular_functionprotein binding
A40005654cellular_componentnucleoplasm
A40005730cellular_componentnucleolus
A40006364biological_processrRNA processing
A40030490biological_processmaturation of SSU-rRNA
A40030686cellular_component90S preribosome
A40032040cellular_componentsmall-subunit processome
A40034455cellular_componentt-UTP complex
A40042254biological_processribosome biogenesis
A40045943biological_processpositive regulation of transcription by RNA polymerase I
A41990904cellular_componentribonucleoprotein complex
A50000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
A50003674molecular_functionmolecular_function
A50005515molecular_functionprotein binding
A50005654cellular_componentnucleoplasm
A50005730cellular_componentnucleolus
A50006364biological_processrRNA processing
A50030490biological_processmaturation of SSU-rRNA
A50032040cellular_componentsmall-subunit processome
A50033553cellular_componentrDNA heterochromatin
A50034455cellular_componentt-UTP complex
A50042254biological_processribosome biogenesis
A50045943biological_processpositive regulation of transcription by RNA polymerase I
A51990904cellular_componentribonucleoprotein complex
A80000049molecular_functiontRNA binding
A80000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
A80005515molecular_functionprotein binding
A80005730cellular_componentnucleolus
A80006364biological_processrRNA processing
A80006409biological_processtRNA export from nucleus
A80030490biological_processmaturation of SSU-rRNA
A80030686cellular_component90S preribosome
A80032040cellular_componentsmall-subunit processome
A80033553cellular_componentrDNA heterochromatin
A80034455cellular_componentt-UTP complex
A80034511molecular_functionU3 snoRNA binding
A80042254biological_processribosome biogenesis
A80045943biological_processpositive regulation of transcription by RNA polymerase I
A81990904cellular_componentribonucleoprotein complex
A90000049molecular_functiontRNA binding
A90000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
A90005515molecular_functionprotein binding
A90005634cellular_componentnucleus
A90005730cellular_componentnucleolus
A90006364biological_processrRNA processing
A90030490biological_processmaturation of SSU-rRNA
A90030686cellular_component90S preribosome
A90032040cellular_componentsmall-subunit processome
A90033553cellular_componentrDNA heterochromatin
A90034455cellular_componentt-UTP complex
A90034511molecular_functionU3 snoRNA binding
A90042254biological_processribosome biogenesis
A90045943biological_processpositive regulation of transcription by RNA polymerase I
A90071528biological_processtRNA re-export from nucleus
A91990904cellular_componentribonucleoprotein complex
AE0000447biological_processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
AE0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
AE0000472biological_processendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
AE0000480biological_processendonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
AE0005515molecular_functionprotein binding
AE0005654cellular_componentnucleoplasm
AE0005730cellular_componentnucleolus
AE0005739cellular_componentmitochondrion
AE0006364biological_processrRNA processing
AE0030490biological_processmaturation of SSU-rRNA
AE0030515molecular_functionsnoRNA binding
AE0030686cellular_component90S preribosome
AE0030688cellular_componentpreribosome, small subunit precursor
AE0032040cellular_componentsmall-subunit processome
AE0033553cellular_componentrDNA heterochromatin
AE0034455cellular_componentt-UTP complex
AE0034511molecular_functionU3 snoRNA binding
AE0042254biological_processribosome biogenesis
AE0045943biological_processpositive regulation of transcription by RNA polymerase I
AE1990904cellular_componentribonucleoprotein complex
AF0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
AF0005515molecular_functionprotein binding
AF0005654cellular_componentnucleoplasm
AF0005730cellular_componentnucleolus
AF0006364biological_processrRNA processing
AF0030490biological_processmaturation of SSU-rRNA
AF0030686cellular_component90S preribosome
AF0032040cellular_componentsmall-subunit processome
AF0033553cellular_componentrDNA heterochromatin
AF0034455cellular_componentt-UTP complex
AF0034511molecular_functionU3 snoRNA binding
AF0042254biological_processribosome biogenesis
AF0045943biological_processpositive regulation of transcription by RNA polymerase I
AF1990904cellular_componentribonucleoprotein complex
AG0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
AG0003723molecular_functionRNA binding
AG0003729molecular_functionmRNA binding
AG0005515molecular_functionprotein binding
AG0005654cellular_componentnucleoplasm
AG0005730cellular_componentnucleolus
AG0005777cellular_componentperoxisome
AG0006364biological_processrRNA processing
AG0030490biological_processmaturation of SSU-rRNA
AG0030686cellular_component90S preribosome
AG0032040cellular_componentsmall-subunit processome
AG0033553cellular_componentrDNA heterochromatin
AG0034455cellular_componentt-UTP complex
AG0034511molecular_functionU3 snoRNA binding
AG0042254biological_processribosome biogenesis
AG0045943biological_processpositive regulation of transcription by RNA polymerase I
AG1990904cellular_componentribonucleoprotein complex
AG2000234biological_processpositive regulation of rRNA processing
B10000028biological_processribosomal small subunit assembly
B10000447biological_processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
B10000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
B10000472biological_processendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
B10000480biological_processendonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
B10000920biological_processseptum digestion after cytokinesis
B10003729molecular_functionmRNA binding
B10005515molecular_functionprotein binding
B10005654cellular_componentnucleoplasm
B10005730cellular_componentnucleolus
B10005737cellular_componentcytoplasm
B10006364biological_processrRNA processing
B10030010biological_processestablishment of cell polarity
B10030490biological_processmaturation of SSU-rRNA
B10030686cellular_component90S preribosome
B10032040cellular_componentsmall-subunit processome
B10034388cellular_componentPwp2p-containing subcomplex of 90S preribosome
B10042254biological_processribosome biogenesis
B11990904cellular_componentribonucleoprotein complex
B20000447biological_processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
B20000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
B20000472biological_processendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
B20000480biological_processendonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
B20005515molecular_functionprotein binding
B20005654cellular_componentnucleoplasm
B20005730cellular_componentnucleolus
B20006364biological_processrRNA processing
B20030490biological_processmaturation of SSU-rRNA
B20030515molecular_functionsnoRNA binding
B20030686cellular_component90S preribosome
B20032040cellular_componentsmall-subunit processome
B20034388cellular_componentPwp2p-containing subcomplex of 90S preribosome
B20034511molecular_functionU3 snoRNA binding
B20042254biological_processribosome biogenesis
B21990904cellular_componentribonucleoprotein complex
B30000447biological_processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
B30000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
B30000472biological_processendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
B30000480biological_processendonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
B30005515molecular_functionprotein binding
B30005654cellular_componentnucleoplasm
B30005730cellular_componentnucleolus
B30006364biological_processrRNA processing
B30030490biological_processmaturation of SSU-rRNA
B30030686cellular_component90S preribosome
B30032040cellular_componentsmall-subunit processome
B30034388cellular_componentPwp2p-containing subcomplex of 90S preribosome
B30034511molecular_functionU3 snoRNA binding
B30042254biological_processribosome biogenesis
B31990904cellular_componentribonucleoprotein complex
B60000447biological_processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
B60000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
B60000472biological_processendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
B60000480biological_processendonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
B60005515molecular_functionprotein binding
B60005634cellular_componentnucleus
B60005654cellular_componentnucleoplasm
B60005730cellular_componentnucleolus
B60006364biological_processrRNA processing
B60006396biological_processRNA processing
B60030490biological_processmaturation of SSU-rRNA
B60030515molecular_functionsnoRNA binding
B60030686cellular_component90S preribosome
B60032040cellular_componentsmall-subunit processome
B60032991cellular_componentprotein-containing complex
B60034388cellular_componentPwp2p-containing subcomplex of 90S preribosome
B60034511molecular_functionU3 snoRNA binding
B60042254biological_processribosome biogenesis
B60042802molecular_functionidentical protein binding
B61990904cellular_componentribonucleoprotein complex
B80000292biological_processRNA fragment catabolic process
B80000447biological_processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
B80000472biological_processendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
B80000480biological_processendonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
B80003674molecular_functionmolecular_function
B80005515molecular_functionprotein binding
B80005654cellular_componentnucleoplasm
B80005730cellular_componentnucleolus
B80006364biological_processrRNA processing
B80030490biological_processmaturation of SSU-rRNA
B80030686cellular_component90S preribosome
B80032040cellular_componentsmall-subunit processome
B80034388cellular_componentPwp2p-containing subcomplex of 90S preribosome
B80042254biological_processribosome biogenesis
B81990904cellular_componentribonucleoprotein complex
BE0003674molecular_functionmolecular_function
BE0005515molecular_functionprotein binding
BE0005634cellular_componentnucleus
BE0005654cellular_componentnucleoplasm
BE0005730cellular_componentnucleolus
BE0006364biological_processrRNA processing
BE0030490biological_processmaturation of SSU-rRNA
BE0030686cellular_component90S preribosome
BE0032040cellular_componentsmall-subunit processome
BE0034388cellular_componentPwp2p-containing subcomplex of 90S preribosome
BE0042254biological_processribosome biogenesis
BE1990904cellular_componentribonucleoprotein complex
RA0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
RA0003674molecular_functionmolecular_function
RA0005515molecular_functionprotein binding
RA0005634cellular_componentnucleus
RA0005730cellular_componentnucleolus
RA0006364biological_processrRNA processing
RA0030686cellular_component90S preribosome
RA0032040cellular_componentsmall-subunit processome
RA0042254biological_processribosome biogenesis
RA0042274biological_processribosomal small subunit biogenesis
RB0000447biological_processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
RB0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
RB0000480biological_processendonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
RB0003674molecular_functionmolecular_function
RB0005515molecular_functionprotein binding
RB0005730cellular_componentnucleolus
RB0005732cellular_componentsno(s)RNA-containing ribonucleoprotein complex
RB0006364biological_processrRNA processing
RB0008150biological_processbiological_process
RB0030490biological_processmaturation of SSU-rRNA
RB0030532cellular_componentsmall nuclear ribonucleoprotein complex
RB0032040cellular_componentsmall-subunit processome
RB0042254biological_processribosome biogenesis
RB1990904cellular_componentribonucleoprotein complex
RC0000447biological_processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
RC0003674molecular_functionmolecular_function
RC0003676molecular_functionnucleic acid binding
RC0003723molecular_functionRNA binding
RC0005515molecular_functionprotein binding
RC0005654cellular_componentnucleoplasm
RC0005730cellular_componentnucleolus
RC0006364biological_processrRNA processing
RC0030490biological_processmaturation of SSU-rRNA
RC0030686cellular_component90S preribosome
RC0030688cellular_componentpreribosome, small subunit precursor
RC0032040cellular_componentsmall-subunit processome
RC0042254biological_processribosome biogenesis
RC0042274biological_processribosomal small subunit biogenesis
RC1990904cellular_componentribonucleoprotein complex
RD0000447biological_processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
RD0000464biological_processendonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
RD0000472biological_processendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
RD0000480biological_processendonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
RD0003676molecular_functionnucleic acid binding
RD0003723molecular_functionRNA binding
RD0003729molecular_functionmRNA binding
RD0005515molecular_functionprotein binding
RD0005654cellular_componentnucleoplasm
RD0005730cellular_componentnucleolus
RD0006364biological_processrRNA processing
RD0006396biological_processRNA processing
RD0008266molecular_functionpoly(U) RNA binding
RD0030490biological_processmaturation of SSU-rRNA
RD0030515molecular_functionsnoRNA binding
RD0030686cellular_component90S preribosome
RD0032040cellular_componentsmall-subunit processome
RD0032991cellular_componentprotein-containing complex
RD0034463biological_process90S preribosome assembly
RD0034511molecular_functionU3 snoRNA binding
RD0034512molecular_functionbox C/D sno(s)RNA binding
RD0034513molecular_functionbox H/ACA snoRNA binding
RD0042134molecular_functionrRNA primary transcript binding
RD0042254biological_processribosome biogenesis
RD1990904cellular_componentribonucleoprotein complex
RE0000028biological_processribosomal small subunit assembly
RE0003674molecular_functionmolecular_function
RE0003723molecular_functionRNA binding
RE0005515molecular_functionprotein binding
RE0005634cellular_componentnucleus
RE0005654cellular_componentnucleoplasm
RE0005730cellular_componentnucleolus
RE0006364biological_processrRNA processing
RE0006409biological_processtRNA export from nucleus
RE0030490biological_processmaturation of SSU-rRNA
RE0030686cellular_component90S preribosome
RE0032040cellular_componentsmall-subunit processome
RE0032545cellular_componentCURI complex
RE0034456cellular_componentUTP-C complex
RE0042254biological_processribosome biogenesis
RE0042790biological_processnucleolar large rRNA transcription by RNA polymerase I
RE0060962biological_processregulation of ribosomal protein gene transcription by RNA polymerase II
RE1990904cellular_componentribonucleoprotein complex
RF0000028biological_processribosomal small subunit assembly
RF0005515molecular_functionprotein binding
RF0005634cellular_componentnucleus
RF0005654cellular_componentnucleoplasm
RF0005730cellular_componentnucleolus
RF0006364biological_processrRNA processing
RF0019843molecular_functionrRNA binding
RF0030490biological_processmaturation of SSU-rRNA
RF0032040cellular_componentsmall-subunit processome
RF0032545cellular_componentCURI complex
RF0034456cellular_componentUTP-C complex
RF0042254biological_processribosome biogenesis
RF0042790biological_processnucleolar large rRNA transcription by RNA polymerase I
RF0060962biological_processregulation of ribosomal protein gene transcription by RNA polymerase II
RG0000447biological_processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
RG0000472biological_processendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
RG0000480biological_processendonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
RG0003723molecular_functionRNA binding
RG0005515molecular_functionprotein binding
RG0005634cellular_componentnucleus
RG0005654cellular_componentnucleoplasm
RG0005730cellular_componentnucleolus
RG0005737cellular_componentcytoplasm
RG0005880cellular_componentnuclear microtubule
RG0006364biological_processrRNA processing
RG0008168molecular_functionmethyltransferase activity
RG0016740molecular_functiontransferase activity
RG0019843molecular_functionrRNA binding
RG0030490biological_processmaturation of SSU-rRNA
RG0030686cellular_component90S preribosome
RG0031167biological_processrRNA methylation
RG0032040cellular_componentsmall-subunit processome
RG0032259biological_processmethylation
RG0034399cellular_componentnuclear periphery
RG0042254biological_processribosome biogenesis
RG0042274biological_processribosomal small subunit biogenesis
RG0042802molecular_functionidentical protein binding
RG0070037molecular_functionrRNA (pseudouridine) methyltransferase activity
RG0070475biological_processrRNA base methylation
RG1990904cellular_componentribonucleoprotein complex
RH0000447biological_processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
RH0000472biological_processendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
RH0000480biological_processendonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
RH0003723molecular_functionRNA binding
RH0005515molecular_functionprotein binding
RH0005634cellular_componentnucleus
RH0005654cellular_componentnucleoplasm
RH0005730cellular_componentnucleolus
RH0005737cellular_componentcytoplasm
RH0005880cellular_componentnuclear microtubule
RH0006364biological_processrRNA processing
RH0008168molecular_functionmethyltransferase activity
RH0016740molecular_functiontransferase activity
RH0019843molecular_functionrRNA binding
RH0030490biological_processmaturation of SSU-rRNA
RH0030686cellular_component90S preribosome
RH0031167biological_processrRNA methylation
RH0032040cellular_componentsmall-subunit processome
RH0032259biological_processmethylation
RH0034399cellular_componentnuclear periphery
RH0042254biological_processribosome biogenesis
RH0042274biological_processribosomal small subunit biogenesis
RH0042802molecular_functionidentical protein binding
RH0070037molecular_functionrRNA (pseudouridine) methyltransferase activity
RH0070475biological_processrRNA base methylation
RH1990904cellular_componentribonucleoprotein complex
RJ0000166molecular_functionnucleotide binding
RJ0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
RJ0000472biological_processendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
RJ0000479biological_processendonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
RJ0000480biological_processendonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
RJ0003729molecular_functionmRNA binding
RJ0003924molecular_functionGTPase activity
RJ0005515molecular_functionprotein binding
RJ0005524molecular_functionATP binding
RJ0005525molecular_functionGTP binding
RJ0005634cellular_componentnucleus
RJ0005654cellular_componentnucleoplasm
RJ0005730cellular_componentnucleolus
RJ0005737cellular_componentcytoplasm
RJ0005739cellular_componentmitochondrion
RJ0016787molecular_functionhydrolase activity
RJ0016887molecular_functionATP hydrolysis activity
RJ0030490biological_processmaturation of SSU-rRNA
RJ0030686cellular_component90S preribosome
RJ0032040cellular_componentsmall-subunit processome
RJ0034511molecular_functionU3 snoRNA binding
RJ0042254biological_processribosome biogenesis
RJ0042274biological_processribosomal small subunit biogenesis
RJ2000232biological_processregulation of rRNA processing
RK0000447biological_processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
RK0000472biological_processendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
RK0000479biological_processendonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
RK0000480biological_processendonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
RK0003824molecular_functioncatalytic activity
RK0003963molecular_functionRNA-3'-phosphate cyclase activity
RK0004521molecular_functionRNA endonuclease activity
RK0005515molecular_functionprotein binding
RK0005654cellular_componentnucleoplasm
RK0005730cellular_componentnucleolus
RK0006364biological_processrRNA processing
RK0006396biological_processRNA processing
RK0008047molecular_functionenzyme activator activity
RK0030490biological_processmaturation of SSU-rRNA
RK0030686cellular_component90S preribosome
RK0032040cellular_componentsmall-subunit processome
RK0042254biological_processribosome biogenesis
RK0042274biological_processribosomal small subunit biogenesis
RK2000232biological_processregulation of rRNA processing
RL0000049molecular_functiontRNA binding
RL0000154biological_processrRNA modification
RL0000166molecular_functionnucleotide binding
RL0002101biological_processtRNA wobble cytosine modification
RL0005515molecular_functionprotein binding
RL0005524molecular_functionATP binding
RL0005730cellular_componentnucleolus
RL0006364biological_processrRNA processing
RL0008033biological_processtRNA processing
RL0008080molecular_functionN-acetyltransferase activity
RL0009451biological_processRNA modification
RL0016072biological_processrRNA metabolic process
RL0016556biological_processmRNA modification
RL0016740molecular_functiontransferase activity
RL0016746molecular_functionacyltransferase activity
RL0016747molecular_functionacyltransferase activity, transferring groups other than amino-acyl groups
RL0030490biological_processmaturation of SSU-rRNA
RL0030515molecular_functionsnoRNA binding
RL0030686cellular_component90S preribosome
RL0030688cellular_componentpreribosome, small subunit precursor
RL0032040cellular_componentsmall-subunit processome
RL0042274biological_processribosomal small subunit biogenesis
RL0051391biological_processtRNA acetylation
RL0051392molecular_functiontRNA cytidine N4-acetyltransferase activity
RL1904812biological_processrRNA acetylation involved in maturation of SSU-rRNA
RL1990883molecular_function18S rRNA cytidine N-acetyltransferase activity
RM0000049molecular_functiontRNA binding
RM0000154biological_processrRNA modification
RM0000166molecular_functionnucleotide binding
RM0002101biological_processtRNA wobble cytosine modification
RM0005515molecular_functionprotein binding
RM0005524molecular_functionATP binding
RM0005730cellular_componentnucleolus
RM0006364biological_processrRNA processing
RM0008033biological_processtRNA processing
RM0008080molecular_functionN-acetyltransferase activity
RM0009451biological_processRNA modification
RM0016072biological_processrRNA metabolic process
RM0016556biological_processmRNA modification
RM0016740molecular_functiontransferase activity
RM0016746molecular_functionacyltransferase activity
RM0016747molecular_functionacyltransferase activity, transferring groups other than amino-acyl groups
RM0030490biological_processmaturation of SSU-rRNA
RM0030515molecular_functionsnoRNA binding
RM0030686cellular_component90S preribosome
RM0030688cellular_componentpreribosome, small subunit precursor
RM0032040cellular_componentsmall-subunit processome
RM0042274biological_processribosomal small subunit biogenesis
RM0051391biological_processtRNA acetylation
RM0051392molecular_functiontRNA cytidine N4-acetyltransferase activity
RM1904812biological_processrRNA acetylation involved in maturation of SSU-rRNA
RM1990883molecular_function18S rRNA cytidine N-acetyltransferase activity
RN0000028biological_processribosomal small subunit assembly
RN0000447biological_processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
RN0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
RN0000472biological_processendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
RN0000480biological_processendonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
RN0005515molecular_functionprotein binding
RN0005634cellular_componentnucleus
RN0005654cellular_componentnucleoplasm
RN0005730cellular_componentnucleolus
RN0005739cellular_componentmitochondrion
RN0006364biological_processrRNA processing
RN0030490biological_processmaturation of SSU-rRNA
RN0030686cellular_component90S preribosome
RN0030688cellular_componentpreribosome, small subunit precursor
RN0030692cellular_componentNoc4p-Nop14p complex
RN0032040cellular_componentsmall-subunit processome
RN0034511molecular_functionU3 snoRNA binding
RN0042254biological_processribosome biogenesis
RN0042274biological_processribosomal small subunit biogenesis
RN1990904cellular_componentribonucleoprotein complex
RO0000028biological_processribosomal small subunit assembly
RO0000447biological_processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
RO0000472biological_processendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
RO0000480biological_processendonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
RO0003674molecular_functionmolecular_function
RO0005515molecular_functionprotein binding
RO0005634cellular_componentnucleus
RO0005654cellular_componentnucleoplasm
RO0005730cellular_componentnucleolus
RO0005829cellular_componentcytosol
RO0006364biological_processrRNA processing
RO0030490biological_processmaturation of SSU-rRNA
RO0030686cellular_component90S preribosome
RO0030688cellular_componentpreribosome, small subunit precursor
RO0030692cellular_componentNoc4p-Nop14p complex
RO0032040cellular_componentsmall-subunit processome
RO0042254biological_processribosome biogenesis
RO0042274biological_processribosomal small subunit biogenesis
RO1990904cellular_componentribonucleoprotein complex
RP0000447biological_processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
RP0000472biological_processendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
RP0000480biological_processendonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
RP0003729molecular_functionmRNA binding
RP0005515molecular_functionprotein binding
RP0005654cellular_componentnucleoplasm
RP0005730cellular_componentnucleolus
RP0005737cellular_componentcytoplasm
RP0006364biological_processrRNA processing
RP0030490biological_processmaturation of SSU-rRNA
RP0030686cellular_component90S preribosome
RP0030688cellular_componentpreribosome, small subunit precursor
RP0032040cellular_componentsmall-subunit processome
RP0042254biological_processribosome biogenesis
RP1990904cellular_componentribonucleoprotein complex
RQ0000166molecular_functionnucleotide binding
RQ0000447biological_processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
RQ0000472biological_processendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
RQ0000480biological_processendonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
RQ0005515molecular_functionprotein binding
RQ0005524molecular_functionATP binding
RQ0005654cellular_componentnucleoplasm
RQ0005730cellular_componentnucleolus
RQ0006364biological_processrRNA processing
RQ0008047molecular_functionenzyme activator activity
RQ0030490biological_processmaturation of SSU-rRNA
RQ0032040cellular_componentsmall-subunit processome
RQ0042254biological_processribosome biogenesis
RQ1990904cellular_componentribonucleoprotein complex
RS0000447biological_processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
RS0005515molecular_functionprotein binding
RS0005634cellular_componentnucleus
RS0005730cellular_componentnucleolus
RS0005737cellular_componentcytoplasm
RS0006364biological_processrRNA processing
RS0016973biological_processpoly(A)+ mRNA export from nucleus
RS0030490biological_processmaturation of SSU-rRNA
RS0030515molecular_functionsnoRNA binding
RS0030686cellular_component90S preribosome
RS0030688cellular_componentpreribosome, small subunit precursor
RS0032040cellular_componentsmall-subunit processome
RS0042254biological_processribosome biogenesis
RT0003723molecular_functionRNA binding
RV0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
RV0003674molecular_functionmolecular_function
RV0005634cellular_componentnucleus
RV0005730cellular_componentnucleolus
RV0005737cellular_componentcytoplasm
RV0042254biological_processribosome biogenesis
RY0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
RY0003674molecular_functionmolecular_function
RY0005515molecular_functionprotein binding
RY0005634cellular_componentnucleus
RY0005730cellular_componentnucleolus
RY0006364biological_processrRNA processing
RY0015031biological_processprotein transport
RY0016192biological_processvesicle-mediated transport
RY0030686cellular_component90S preribosome
RY0032040cellular_componentsmall-subunit processome
SC0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SC0002181biological_processcytoplasmic translation
SC0003735molecular_functionstructural constituent of ribosome
SC0005737cellular_componentcytoplasm
SC0005829cellular_componentcytosol
SC0005840cellular_componentribosome
SC0006412biological_processtranslation
SC0022627cellular_componentcytosolic small ribosomal subunit
SC0030686cellular_component90S preribosome
SC1990904cellular_componentribonucleoprotein complex
SF0002181biological_processcytoplasmic translation
SF0003723molecular_functionRNA binding
SF0003735molecular_functionstructural constituent of ribosome
SF0005737cellular_componentcytoplasm
SF0005829cellular_componentcytosol
SF0005840cellular_componentribosome
SF0006412biological_processtranslation
SF0019843molecular_functionrRNA binding
SF0022627cellular_componentcytosolic small ribosomal subunit
SF0030686cellular_component90S preribosome
SF1990904cellular_componentribonucleoprotein complex
SG0000054biological_processribosomal subunit export from nucleus
SG0002181biological_processcytoplasmic translation
SG0003723molecular_functionRNA binding
SG0003729molecular_functionmRNA binding
SG0003735molecular_functionstructural constituent of ribosome
SG0005515molecular_functionprotein binding
SG0005737cellular_componentcytoplasm
SG0005829cellular_componentcytosol
SG0005840cellular_componentribosome
SG0006412biological_processtranslation
SG0006450biological_processregulation of translational fidelity
SG0015935cellular_componentsmall ribosomal subunit
SG0019843molecular_functionrRNA binding
SG0022627cellular_componentcytosolic small ribosomal subunit
SG0030490biological_processmaturation of SSU-rRNA
SG0030686cellular_component90S preribosome
SG1990904cellular_componentribonucleoprotein complex
SH0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SH0003735molecular_functionstructural constituent of ribosome
SH0005654cellular_componentnucleoplasm
SH0005730cellular_componentnucleolus
SH0005737cellular_componentcytoplasm
SH0005829cellular_componentcytosol
SH0005840cellular_componentribosome
SH0006364biological_processrRNA processing
SH0006412biological_processtranslation
SH0022627cellular_componentcytosolic small ribosomal subunit
SH0030686cellular_component90S preribosome
SH0032040cellular_componentsmall-subunit processome
SH0042254biological_processribosome biogenesis
SH1990904cellular_componentribonucleoprotein complex
SI0002181biological_processcytoplasmic translation
SI0003735molecular_functionstructural constituent of ribosome
SI0005654cellular_componentnucleoplasm
SI0005730cellular_componentnucleolus
SI0005737cellular_componentcytoplasm
SI0005829cellular_componentcytosol
SI0005840cellular_componentribosome
SI0006364biological_processrRNA processing
SI0006412biological_processtranslation
SI0022627cellular_componentcytosolic small ribosomal subunit
SI0030686cellular_component90S preribosome
SI0032040cellular_componentsmall-subunit processome
SI0042254biological_processribosome biogenesis
SI0042274biological_processribosomal small subunit biogenesis
SI1990904cellular_componentribonucleoprotein complex
SJ0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SJ0003735molecular_functionstructural constituent of ribosome
SJ0005737cellular_componentcytoplasm
SJ0005829cellular_componentcytosol
SJ0005840cellular_componentribosome
SJ0006412biological_processtranslation
SJ0022627cellular_componentcytosolic small ribosomal subunit
SJ0030686cellular_component90S preribosome
SJ1990904cellular_componentribonucleoprotein complex
SK0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SK0003723molecular_functionRNA binding
SK0003735molecular_functionstructural constituent of ribosome
SK0005515molecular_functionprotein binding
SK0005654cellular_componentnucleoplasm
SK0005730cellular_componentnucleolus
SK0005737cellular_componentcytoplasm
SK0005829cellular_componentcytosol
SK0005840cellular_componentribosome
SK0006364biological_processrRNA processing
SK0006412biological_processtranslation
SK0015935cellular_componentsmall ribosomal subunit
SK0019843molecular_functionrRNA binding
SK0022627cellular_componentcytosolic small ribosomal subunit
SK0030686cellular_component90S preribosome
SK0032040cellular_componentsmall-subunit processome
SK0042254biological_processribosome biogenesis
SK0042274biological_processribosomal small subunit biogenesis
SK1990904cellular_componentribonucleoprotein complex
SM0000028biological_processribosomal small subunit assembly
SM0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SM0003723molecular_functionRNA binding
SM0003735molecular_functionstructural constituent of ribosome
SM0005737cellular_componentcytoplasm
SM0005829cellular_componentcytosol
SM0005840cellular_componentribosome
SM0006412biological_processtranslation
SM0019843molecular_functionrRNA binding
SM0022627cellular_componentcytosolic small ribosomal subunit
SM0030686cellular_component90S preribosome
SM1990904cellular_componentribonucleoprotein complex
SO0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SO0002181biological_processcytoplasmic translation
SO0003735molecular_functionstructural constituent of ribosome
SO0005730cellular_componentnucleolus
SO0005737cellular_componentcytoplasm
SO0005829cellular_componentcytosol
SO0005840cellular_componentribosome
SO0006412biological_processtranslation
SO0022627cellular_componentcytosolic small ribosomal subunit
SO0030686cellular_component90S preribosome
SO0070181molecular_functionsmall ribosomal subunit rRNA binding
SO1990904cellular_componentribonucleoprotein complex
SP0000028biological_processribosomal small subunit assembly
SP0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SP0002181biological_processcytoplasmic translation
SP0003729molecular_functionmRNA binding
SP0003735molecular_functionstructural constituent of ribosome
SP0005654cellular_componentnucleoplasm
SP0005730cellular_componentnucleolus
SP0005737cellular_componentcytoplasm
SP0005829cellular_componentcytosol
SP0005840cellular_componentribosome
SP0006364biological_processrRNA processing
SP0006412biological_processtranslation
SP0022627cellular_componentcytosolic small ribosomal subunit
SP0030686cellular_component90S preribosome
SP0032040cellular_componentsmall-subunit processome
SP0042254biological_processribosome biogenesis
SP1990904cellular_componentribonucleoprotein complex
SR0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SR0003723molecular_functionRNA binding
SR0003735molecular_functionstructural constituent of ribosome
SR0005737cellular_componentcytoplasm
SR0005829cellular_componentcytosol
SR0005840cellular_componentribosome
SR0006412biological_processtranslation
SR0006413biological_processtranslational initiation
SR0022627cellular_componentcytosolic small ribosomal subunit
SR0030686cellular_component90S preribosome
SR1990904cellular_componentribonucleoprotein complex
SX0002181biological_processcytoplasmic translation
SX0003735molecular_functionstructural constituent of ribosome
SX0005737cellular_componentcytoplasm
SX0005829cellular_componentcytosol
SX0005840cellular_componentribosome
SX0006412biological_processtranslation
SX0022627cellular_componentcytosolic small ribosomal subunit
SX1990904cellular_componentribonucleoprotein complex
SY0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SY0003735molecular_functionstructural constituent of ribosome
SY0005737cellular_componentcytoplasm
SY0005829cellular_componentcytosol
SY0005840cellular_componentribosome
SY0006412biological_processtranslation
SY0006450biological_processregulation of translational fidelity
SY0015935cellular_componentsmall ribosomal subunit
SY0022627cellular_componentcytosolic small ribosomal subunit
SY1990145biological_processmaintenance of translational fidelity
SY1990904cellular_componentribonucleoprotein complex
SZ0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SZ0002181biological_processcytoplasmic translation
SZ0003735molecular_functionstructural constituent of ribosome
SZ0005737cellular_componentcytoplasm
SZ0005739cellular_componentmitochondrion
SZ0005829cellular_componentcytosol
SZ0005840cellular_componentribosome
SZ0006412biological_processtranslation
SZ0022627cellular_componentcytosolic small ribosomal subunit
SZ1990904cellular_componentribonucleoprotein complex
Sc0000028biological_processribosomal small subunit assembly
Sc0000462biological_processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Sc0003723molecular_functionRNA binding
Sc0003735molecular_functionstructural constituent of ribosome
Sc0005737cellular_componentcytoplasm
Sc0005829cellular_componentcytosol
Sc0005840cellular_componentribosome
Sc0006412biological_processtranslation
Sc0008270molecular_functionzinc ion binding
Sc0022627cellular_componentcytosolic small ribosomal subunit
Sc0046872molecular_functionmetal ion binding
Sc1990904cellular_componentribonucleoprotein complex
Sd0000028biological_processribosomal small subunit assembly
Sd0000054biological_processribosomal subunit export from nucleus
Sd0003735molecular_functionstructural constituent of ribosome
Sd0005737cellular_componentcytoplasm
Sd0005829cellular_componentcytosol
Sd0005840cellular_componentribosome
Sd0006412biological_processtranslation
Sd0022627cellular_componentcytosolic small ribosomal subunit
Sd0030490biological_processmaturation of SSU-rRNA
Sd1900153biological_processpositive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
Sd1990904cellular_componentribonucleoprotein complex
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue ZN Sc 101
ChainResidue
ScCYS37
ScCYS40
ScCYS56
ScCYS59
site_idAC2
Number of Residues4
Detailsbinding site for residue ZN 5K 201
ChainResidue
5KCYS101
5KCYS130
5KHIS132
5KCYS140
site_idAC3
Number of Residues11
Detailsbinding site for residue GTP RJ 1201
ChainResidue
RJGLY79
RJTHR80
RJGLY81
RJLYS82
RJTHR83
RJTHR84
RJHIS173
RJSER208
RJTYR215
RJMG1202
RJPRO78
site_idAC4
Number of Residues3
Detailsbinding site for residue MG RJ 1202
ChainResidue
RJTHR83
RJGLU119
RJGTP1201
Functional Information from PROSITE/UniProt
site_idPS00052
Number of Residues27
DetailsRIBOSOMAL_S7 Ribosomal protein S7 signature. ErLtnsLMmngrnnGKKlkavrIIkhT
ChainResidueDetails
SGGLU91-THR117
site_idPS00053
Number of Residues18
DetailsRIBOSOMAL_S8 Ribosomal protein S8 signature. GyvILTTSaGIMdheeAR
ChainResidueDetails
SXGLY100-ARG117
site_idPS00054
Number of Residues23
DetailsRIBOSOMAL_S11 Ribosomal protein S11 signature. LrALarS.GLrIgrieDvTPvPSD
ChainResidueDetails
SPLEU102-ASP124
site_idPS00055
Number of Residues8
DetailsRIBOSOMAL_S12 Ribosomal protein S12 signature. KqPNSAiR
ChainResidueDetails
SYLYS62-ARG69
site_idPS00056
Number of Residues13
DetailsRIBOSOMAL_S17 Ribosomal protein S17 signature. GDiVtVgQcRPIS
ChainResidueDetails
SMGLY120-SER132
site_idPS00178
Number of Residues11
DetailsAA_TRNA_LIGASE_I Aminoacyl-transfer RNA synthetases class-I signature. Pw.NAvMHLGHS
ChainResidueDetails
5CPRO242-SER252
site_idPS00360
Number of Residues19
DetailsRIBOSOMAL_S9 Ribosomal protein S9 signature. GGGhvSQvyAirqAiAKGL
ChainResidueDetails
SRGLY71-LEU89
site_idPS00362
Number of Residues31
DetailsRIBOSOMAL_S15 Ribosomal protein S15 signature. VrkHLernRkDkdAkfrLilIesrihrLarY
ChainResidueDetails
SOVAL98-TYR128
site_idPS00528
Number of Residues15
DetailsRIBOSOMAL_S4E Ribosomal protein S4e signature. HlKRLAaPhhWlLdK
ChainResidueDetails
SFHIS8-LYS22
site_idPS00529
Number of Residues23
DetailsRIBOSOMAL_S24E Ribosomal protein S24e signature. FGggKSvGFGlVYNSvaeakkfE
ChainResidueDetails
SZPHE64-GLU86
site_idPS00566
Number of Residues15
DetailsFIBRILLARIN Fibrillarin signature. GVVYAVEFShRpgRE
ChainResidueDetails
3BGLY192-GLU206
site_idPS00578
Number of Residues12
DetailsRIBOSOMAL_S6E Ribosomal protein S6e signature. ISGGnDkqGfPM
ChainResidueDetails
SHILE52-MET63
site_idPS00632
Number of Residues25
DetailsRIBOSOMAL_S4 Ribosomal protein S4 signature. LErRLqtqVYKlglAkSvhhARvLI
ChainResidueDetails
SKLEU105-ILE129
site_idPS00678
Number of Residues15
DetailsWD_REPEATS_1 Trp-Asp (WD) repeats signature. MATTgaDrSMKIWDI
ChainResidueDetails
5CMET289-ILE303
AFLEU140-ILE154
B3LEU163-LEU177
B3LEU211-PHE225
B3LEU590-CYS604
B2LEU136-LEU150
B2LEU177-LEU191
B2LEU405-ILE419
B2LEU488-PHE502
B1ILE206-PHE220
B1VAL360-ILE374
B1MET402-LEU416
BEILE600-LEU614
site_idPS00948
Number of Residues14
DetailsRIBOSOMAL_S7E Ribosomal protein S7e signature. KLtRELEKKFQdRH
ChainResidueDetails
SILYS76-HIS89
site_idPS00961
Number of Residues9
DetailsRIBOSOMAL_S28E Ribosomal protein S28e signature. ESEREARrL
ChainResidueDetails
SdGLU58-LEU66
site_idPS01082
Number of Residues18
DetailsRIBOSOMAL_L7AE Ribosomal protein L7Ae signature. CedknVPYvfVpSRvaLG
ChainResidueDetails
3GCYS71-GLY88
site_idPS01168
Number of Residues33
DetailsRIBOSOMAL_S27E Ribosomal protein S27e signature. KCpgClnittvFShAqtavtCesCStiLctPtG
ChainResidueDetails
ScLYS36-GLY68
site_idPS01191
Number of Residues13
DetailsRIBOSOMAL_S3AE Ribosomal protein S3Ae signature. LkGRVvEvCLaDL
ChainResidueDetails
SCLEU61-LEU73
site_idPS01193
Number of Residues20
DetailsRIBOSOMAL_S8E Ribosomal protein S8e signature. RsaTGAkraqf.RkKrKfELG
ChainResidueDetails
SJARG11-GLY30
site_idPS01287
Number of Residues11
DetailsRTC RNA 3'-terminal phosphate cyclase signature. RGspPlGGGeV
ChainResidueDetails
RKARG156-VAL166
Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues63
DetailsDomain: {"description":"S4 RNA-binding"}
ChainResidueDetails
site_idSWS_FT_FI2
Number of Residues1
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"17330950","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI3
Number of Residues2
DetailsModified residue: {"description":"Phosphothreonine","evidences":[{"source":"PubMed","id":"17287358","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI4
Number of Residues45
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"PubMed","id":"22106047","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI5
Number of Residues2
DetailsModified residue: {"description":"Phosphothreonine","evidences":[{"source":"PubMed","id":"18407956","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI6
Number of Residues2
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"PubMed","id":"30609991","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI7
Number of Residues1
DetailsModified residue: {"description":"Phosphothreonine","evidences":[{"source":"PubMed","id":"19779198","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI8
Number of Residues3
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"17287358","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI9
Number of Residues2
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"17287358","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"19779198","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI10
Number of Residues6
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"19779198","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI11
Number of Residues6
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"18407956","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI12
Number of Residues140
DetailsDomain: {"description":"S4 RNA-binding","evidences":[{"source":"PROSITE-ProRule","id":"PRU00182","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI13
Number of Residues2
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"UniProtKB","id":"P05755","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails
site_idSWS_FT_FI14
Number of Residues1
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"18407956","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"19779198","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI15
Number of Residues1
DetailsModified residue: {"description":"3,4-dihydroxyproline","evidences":[{"source":"PubMed","id":"24550462","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI16
Number of Residues22
DetailsZinc finger: {"description":"C4-type","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI17
Number of Residues1
DetailsModified residue: {"description":"S-methylcysteine","evidences":[{"source":"PubMed","id":"22650761","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI18
Number of Residues2
DetailsRegion: {"description":"S-adenosyl-L-methionine binding","evidences":[{"source":"UniProtKB","id":"Q9Y9U3","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails
site_idSWS_FT_FI19
Number of Residues10
DetailsRegion: {"description":"S-adenosyl-L-methionine binding","evidences":[{"source":"UniProtKB","id":"P22087","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails
site_idSWS_FT_FI20
Number of Residues64
DetailsRegion: {"description":"Helical","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI21
Number of Residues120
DetailsDomain: {"description":"Nop","evidences":[{"source":"PROSITE-ProRule","id":"PRU00690","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI22
Number of Residues354
DetailsRepeat: {"description":"WD 1"}
ChainResidueDetails
site_idSWS_FT_FI23
Number of Residues397
DetailsRepeat: {"description":"WD 2"}
ChainResidueDetails
site_idSWS_FT_FI24
Number of Residues463
DetailsRepeat: {"description":"WD 3"}
ChainResidueDetails
site_idSWS_FT_FI25
Number of Residues380
DetailsRepeat: {"description":"WD 4"}
ChainResidueDetails
site_idSWS_FT_FI26
Number of Residues253
DetailsRepeat: {"description":"WD 5"}
ChainResidueDetails
site_idSWS_FT_FI27
Number of Residues273
DetailsRepeat: {"description":"WD 6"}
ChainResidueDetails
site_idSWS_FT_FI28
Number of Residues38
DetailsRepeat: {"description":"HEAT"}
ChainResidueDetails
site_idSWS_FT_FI29
Number of Residues1
DetailsModified residue: {"description":"N-acetylserine","evidences":[{"source":"PubMed","id":"22814378","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI30
Number of Residues153
DetailsRepeat: {"description":"WD 7"}
ChainResidueDetails
site_idSWS_FT_FI31
Number of Residues69
DetailsRepeat: {"description":"WD 8"}
ChainResidueDetails
site_idSWS_FT_FI32
Number of Residues69
DetailsRepeat: {"description":"WD 9"}
ChainResidueDetails
site_idSWS_FT_FI33
Number of Residues72
DetailsRepeat: {"description":"WD 10"}
ChainResidueDetails
site_idSWS_FT_FI34
Number of Residues77
DetailsRepeat: {"description":"WD 11"}
ChainResidueDetails
site_idSWS_FT_FI35
Number of Residues80
DetailsRepeat: {"description":"WD 12"}
ChainResidueDetails
site_idSWS_FT_FI36
Number of Residues39
DetailsRepeat: {"description":"WD 13"}
ChainResidueDetails
site_idSWS_FT_FI37
Number of Residues38
DetailsRepeat: {"description":"WD 14"}
ChainResidueDetails
site_idSWS_FT_FI38
Number of Residues192
DetailsRegion: {"description":"Disordered","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]}
ChainResidueDetails
site_idSWS_FT_FI39
Number of Residues1
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"17330950","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"18407956","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"19779198","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails
site_idSWS_FT_FI40
Number of Residues31
DetailsRepeat: {"description":"WD 1","evidences":[{"source":"PROSITE-ProRule","id":"PRU00221","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"24466140","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI41
Number of Residues30
DetailsRepeat: {"description":"WD 2","evidences":[{"source":"PROSITE-ProRule","id":"PRU00221","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"24466140","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI42
Number of Residues39
DetailsRepeat: {"description":"WD 3","evidences":[{"source":"PROSITE-ProRule","id":"PRU00221","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"24466140","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI43
Number of Residues33
DetailsRepeat: {"description":"WD 4","evidences":[{"source":"PROSITE-ProRule","id":"PRU00221","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"24466140","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI44
Number of Residues37
DetailsRepeat: {"description":"WD 5","evidences":[{"source":"PROSITE-ProRule","id":"PRU00221","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"24466140","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI45
Number of Residues35
DetailsRepeat: {"description":"WD 6","evidences":[{"source":"PROSITE-ProRule","id":"PRU00221","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"24466140","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI46
Number of Residues52
DetailsRepeat: {"description":"WD 7","evidences":[{"source":"PROSITE-ProRule","id":"PRU00221","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"24466140","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI47
Number of Residues34
DetailsRepeat: {"description":"WD 8","evidences":[{"source":"PROSITE-ProRule","id":"PRU00221","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"24466140","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI48
Number of Residues39
DetailsRepeat: {"description":"WD 9","evidences":[{"source":"PROSITE-ProRule","id":"PRU00221","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"24466140","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI49
Number of Residues34
DetailsRepeat: {"description":"WD 10","evidences":[{"source":"PROSITE-ProRule","id":"PRU00221","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"24466140","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI50
Number of Residues36
DetailsRepeat: {"description":"WD 11","evidences":[{"source":"PROSITE-ProRule","id":"PRU00221","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"24466140","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI51
Number of Residues35
DetailsRepeat: {"description":"WD 12","evidences":[{"source":"PROSITE-ProRule","id":"PRU00221","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"24466140","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI52
Number of Residues41
DetailsRepeat: {"description":"WD 13","evidences":[{"source":"PROSITE-ProRule","id":"PRU00221","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"24466140","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI53
Number of Residues38
DetailsRepeat: {"description":"WD 14","evidences":[{"source":"PROSITE-ProRule","id":"PRU00221","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"24466140","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI54
Number of Residues32
DetailsRepeat: {"description":"HAT 1"}
ChainResidueDetails
site_idSWS_FT_FI55
Number of Residues65
DetailsRepeat: {"description":"HAT 2"}
ChainResidueDetails
site_idSWS_FT_FI56
Number of Residues64
DetailsRepeat: {"description":"HAT 3"}
ChainResidueDetails
site_idSWS_FT_FI57
Number of Residues107
DetailsCompositional bias: {"description":"Basic and acidic residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]}
ChainResidueDetails
site_idSWS_FT_FI58
Number of Residues181
DetailsDomain: {"description":"Brix","evidences":[{"source":"PROSITE-ProRule","id":"PRU00034","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI59
Number of Residues17
DetailsCompositional bias: {"description":"Basic residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]}
ChainResidueDetails
site_idSWS_FT_FI60
Number of Residues99
DetailsDomain: {"description":"PINc"}
ChainResidueDetails
site_idSWS_FT_FI61
Number of Residues70
DetailsDomain: {"description":"KH"}
ChainResidueDetails
site_idSWS_FT_FI62
Number of Residues35
DetailsRepeat: {"description":"HAT 4"}
ChainResidueDetails
site_idSWS_FT_FI63
Number of Residues18
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"18063569","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"21087996","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI64
Number of Residues8
DetailsSite: {"description":"Interaction with substrate rRNA","evidences":[{"source":"PubMed","id":"21087996","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails
site_idSWS_FT_FI65
Number of Residues2
DetailsSite: {"description":"Stabilizes Arg-88","evidences":[{"source":"PubMed","id":"21087996","evidenceCode":"ECO:0000303"}]}
ChainResidueDetails
site_idSWS_FT_FI66
Number of Residues165
DetailsDomain: {"description":"Bms1-type G","evidences":[{"source":"PROSITE-ProRule","id":"PRU01051","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI67
Number of Residues7
DetailsRegion: {"description":"G1","evidences":[{"source":"PROSITE-ProRule","id":"PRU01051","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI68
Number of Residues4
DetailsRegion: {"description":"G2","evidences":[{"source":"PROSITE-ProRule","id":"PRU01051","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI69
Number of Residues3
DetailsRegion: {"description":"G3","evidences":[{"source":"PROSITE-ProRule","id":"PRU01051","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI70
Number of Residues3
DetailsRegion: {"description":"G4","evidences":[{"source":"PROSITE-ProRule","id":"PRU01051","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI71
Number of Residues9
DetailsRegion: {"description":"G5","evidences":[{"source":"PROSITE-ProRule","id":"PRU01051","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI72
Number of Residues14
DetailsBinding site: {"evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI73
Number of Residues38
DetailsBinding site: {"evidences":[{"source":"UniProtKB","id":"P76562","evidenceCode":"ECO:0000250"},{"source":"HAMAP-Rule","id":"MF_03211","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails
site_idSWS_FT_FI74
Number of Residues37
DetailsRepeat: {"description":"HEAT 4"}
ChainResidueDetails
site_idSWS_FT_FI75
Number of Residues38
DetailsRepeat: {"description":"HEAT 5"}
ChainResidueDetails
site_idSWS_FT_FI76
Number of Residues36
DetailsRepeat: {"description":"HEAT 6"}
ChainResidueDetails
site_idSWS_FT_FI77
Number of Residues40
DetailsRepeat: {"description":"HEAT 9"}
ChainResidueDetails
site_idSWS_FT_FI78
Number of Residues37
DetailsRepeat: {"description":"HEAT 12"}
ChainResidueDetails
site_idSWS_FT_FI79
Number of Residues37
DetailsRepeat: {"description":"HEAT 13"}
ChainResidueDetails
site_idSWS_FT_FI80
Number of Residues39
DetailsRepeat: {"description":"HEAT 14"}
ChainResidueDetails

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PDB entries from 2025-10-29

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