6LD7
Native Structure of cystathionine gamma synthase (XometB) from Xanthomonas oryzae pv. oryzae
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003962 | molecular_function | cystathionine gamma-synthase activity |
A | 0005737 | cellular_component | cytoplasm |
A | 0016846 | molecular_function | carbon-sulfur lyase activity |
A | 0019346 | biological_process | transsulfuration |
A | 0030170 | molecular_function | pyridoxal phosphate binding |
B | 0003962 | molecular_function | cystathionine gamma-synthase activity |
B | 0005737 | cellular_component | cytoplasm |
B | 0016846 | molecular_function | carbon-sulfur lyase activity |
B | 0019346 | biological_process | transsulfuration |
B | 0030170 | molecular_function | pyridoxal phosphate binding |
C | 0003962 | molecular_function | cystathionine gamma-synthase activity |
C | 0005737 | cellular_component | cytoplasm |
C | 0016846 | molecular_function | carbon-sulfur lyase activity |
C | 0019346 | biological_process | transsulfuration |
C | 0030170 | molecular_function | pyridoxal phosphate binding |
D | 0003962 | molecular_function | cystathionine gamma-synthase activity |
D | 0005737 | cellular_component | cytoplasm |
D | 0016846 | molecular_function | carbon-sulfur lyase activity |
D | 0019346 | biological_process | transsulfuration |
D | 0030170 | molecular_function | pyridoxal phosphate binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 4 |
Details | binding site for residue PEG A 501 |
Chain | Residue |
A | TYR109 |
A | LLP206 |
A | SER334 |
A | ARG369 |
site_id | AC2 |
Number of Residues | 8 |
Details | binding site for residue PGE B 501 |
Chain | Residue |
B | HOH778 |
C | TYR54 |
C | ARG56 |
B | TYR109 |
B | LLP206 |
B | GLU333 |
B | SER334 |
B | ARG369 |
site_id | AC3 |
Number of Residues | 4 |
Details | binding site for residue PGE B 502 |
Chain | Residue |
B | GLN229 |
B | TRP233 |
C | LYS121 |
C | HOH639 |
site_id | AC4 |
Number of Residues | 4 |
Details | binding site for residue PGE B 503 |
Chain | Residue |
B | ALA118 |
B | LYS121 |
C | GLN229 |
C | TRP232 |
site_id | AC5 |
Number of Residues | 6 |
Details | binding site for residue PGE C 501 |
Chain | Residue |
B | SER57 |
C | TYR109 |
C | LLP206 |
C | GLU333 |
C | SER334 |
C | ARG369 |
site_id | AC6 |
Number of Residues | 6 |
Details | binding site for residue PEG D 501 |
Chain | Residue |
A | TYR54 |
D | TYR109 |
D | LLP206 |
D | GLU333 |
D | SER334 |
D | ARG369 |
site_id | AC7 |
Number of Residues | 1 |
Details | binding site for residue PEG D 502 |
Chain | Residue |
A | HOH717 |
site_id | AC8 |
Number of Residues | 4 |
Details | binding site for residue PGE D 503 |
Chain | Residue |
D | ALA118 |
D | LYS121 |
D | LYS122 |
D | HOH603 |
Functional Information from PROSITE/UniProt
site_id | PS00868 |
Number of Residues | 15 |
Details | CYS_MET_METAB_PP Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. DLvlhSTTKYInGHS |
Chain | Residue | Details |
A | ASP198-SER212 |