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Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

6LB2

Crystal structure of rhesus macaque MHC class I molecule Mamu-B*098 complexed with mono-acyl glycerol

Functional Information from GO Data

Chain	GOid	namespace	contents
B	0006955	biological_process	immune response
B	0042612	cellular_component	MHC class I protein complex
D	0006955	biological_process	immune response
D	0042612	cellular_component	MHC class I protein complex

Functional Information from PDB Data

site_id	AC1
Number of Residues	4
Details	binding site for residue ZN A 301

Chain	Residue
A	ALA0
A	HIS3
A	GLN180
C	GLU138

site_id	AC2
Number of Residues	4
Details	binding site for residue ZN A 302

Chain	Residue
A	GLU138
A	HOH549
C	ALA0
C	HIS3

site_id	AC3
Number of Residues	5
Details	binding site for residue ZN A 303

Chain	Residue
A	HOH417
A	HOH576
B	GLU36
B	HOH224
A	HIS197

site_id	AC4
Number of Residues	5
Details	binding site for residue ZN A 304

Chain	Residue
A	THR190
A	HIS191
A	HIS192
A	THR200
A	ARG202

site_id	AC5
Number of Residues	7
Details	binding site for residue EDO A 305

Chain	Residue
A	PRO47
A	ALA49
A	GLU53
A	EDO313
A	EDO320
A	HOH518
A	HOH552

site_id	AC6
Number of Residues	6
Details	binding site for residue EDO A 306

Chain	Residue
A	THR178
A	ARG181
A	GLU183
A	TYR209
A	GLY239
A	HOH533

site_id	AC7
Number of Residues	4
Details	binding site for residue EDO A 307

Chain	Residue
A	ARG48
A	EDO315
A	HOH422
A	HOH569

site_id	AC8
Number of Residues	4
Details	binding site for residue EDO A 308

Chain	Residue
A	GLU53
A	TRP60
A	EDO320
A	HOH464

site_id	AC9
Number of Residues	2
Details	binding site for residue EDO A 309

Chain	Residue
A	ASP30
A	HOH502

site_id	AD1
Number of Residues	6
Details	binding site for residue EDO A 310

Chain	Residue
A	SER2
A	HIS3
A	SER4
A	ASP29
A	EDO312
A	HOH531

site_id	AD2
Number of Residues	5
Details	binding site for residue EDO A 311

Chain	Residue
A	GLY207
A	ASP238
A	THR240
A	GLN242
B	ARG12

site_id	AD3
Number of Residues	4
Details	binding site for residue EDO A 312

Chain	Residue
A	SER4
A	ASP29
A	ASP30
A	EDO310

site_id	AD4
Number of Residues	7
Details	binding site for residue EDO A 313

Chain	Residue
A	ARG35
A	GLU46
A	PRO47
A	ARG48
A	EDO305
A	EDO320
A	HOH581

site_id	AD5
Number of Residues	5
Details	binding site for residue EDO A 314

Chain	Residue
A	THR190
A	HIS191
A	HIS192
A	HOH408
A	HOH575

site_id	AD6
Number of Residues	5
Details	binding site for residue EDO A 315

Chain	Residue
A	ARG48
A	EDO307
A	HOH543
B	GLU50
B	TYR67

site_id	AD7
Number of Residues	3
Details	binding site for residue EDO A 316

Chain	Residue
A	THR73
A	SER77
A	TRP147

site_id	AD8
Number of Residues	5
Details	binding site for residue EDO A 317

Chain	Residue
A	TYR7
A	TYR159
A	SER167
A	TYR171
A	EKG322

site_id	AD9
Number of Residues	4
Details	binding site for residue EDO A 318

Chain	Residue
A	ARG108
A	LEU109
A	GLU161
A	HOH430

site_id	AE1
Number of Residues	10
Details	binding site for residue EDO A 319

Chain	Residue
A	ASP30
A	PRO235
A	GLY239
A	THR240
A	PHE241
A	HOH414
A	HOH442
A	HOH510
B	EDO105
B	HOH247

site_id	AE2
Number of Residues	7
Details	binding site for residue EDO A 320

Chain	Residue
A	EDO313
A	HOH401
A	HOH464
A	LYS44
A	GLU46
A	EDO305
A	EDO308

site_id	AE3
Number of Residues	4
Details	binding site for residue EDO A 321

Chain	Residue
A	LEU266
A	PRO267
A	GLU268
A	LEU270

site_id	AE4
Number of Residues	13
Details	binding site for residue EKG A 322

Chain	Residue
A	TYR7
A	SER9
A	PHE22
A	VAL24
A	GLN63
A	ARG66
A	VAL67
A	ALA70
A	THR97
A	SER99
A	TRP156
A	TYR159
A	EDO317

site_id	AE5
Number of Residues	4
Details	binding site for residue EDO B 101

Chain	Residue
B	SER57
B	LYS58
B	ASP59
B	HOH207

site_id	AE6
Number of Residues	5
Details	binding site for residue EDO B 102

Chain	Residue
A	ARG21
A	ILE23
B	SER33
B	ASP34
B	HOH226

site_id	AE7
Number of Residues	7
Details	binding site for residue EDO B 103

Chain	Residue
A	SER195
A	HOH406
B	ASP38
B	LYS45
B	ARG81
B	HOH205
B	HOH210

site_id	AE8
Number of Residues	9
Details	binding site for residue EDO B 104

Chain	Residue
A	TRP204
A	LEU206
A	ARG234
A	GLN242
B	TYR10
B	SER11
B	HIS13
B	PRO14
B	HOH203

site_id	AE9
Number of Residues	12
Details	binding site for residue EDO B 105

Chain	Residue
A	TYR27
A	PRO235
A	EDO319
B	TYR26
B	SER52
B	TYR63
B	LEU64
B	LEU65
B	HOH201
B	HOH212
B	HOH247
B	HOH249

site_id	AF1
Number of Residues	5
Details	binding site for residue ZN C 301

Chain	Residue
A	GLU58
A	GLU61
C	HIS191
C	ALA199
C	GLU254

site_id	AF2
Number of Residues	4
Details	binding site for residue ZN C 302

Chain	Residue
A	HIS191
A	GLU254
C	GLU58
C	GLU61

site_id	AF3
Number of Residues	3
Details	binding site for residue ZN C 303

Chain	Residue
C	ASP196
C	HIS197
D	THR86

site_id	AF4
Number of Residues	6
Details	binding site for residue EDO C 304

Chain	Residue
A	GLY1
A	GLY104
A	PRO105
C	ASP137
C	GLU138
C	HOH427

site_id	AF5
Number of Residues	3
Details	binding site for residue EDO C 305

Chain	Residue
C	GLY252
C	GLU253
C	HOH523

site_id	AF6
Number of Residues	7
Details	binding site for residue EDO C 306

Chain	Residue
C	ASP122
C	TYR123
C	ILE124
C	ALA125
C	THR134
C	ALA136
C	HOH437

site_id	AF7
Number of Residues	6
Details	binding site for residue EDO C 307

Chain	Residue
C	GLY207
C	ASP238
C	THR240
C	GLN242
C	HOH421
D	ARG12

site_id	AF8
Number of Residues	5
Details	binding site for residue EDO C 308

Chain	Residue
C	TRP274
C	EDO311
C	HOH433
C	HOH457
C	HOH479

site_id	AF9
Number of Residues	6
Details	binding site for residue EDO C 309

Chain	Residue
C	TYR85
C	ARG121
C	ASP122
C	ASP137
C	EDO314
C	HOH430

site_id	AG1
Number of Residues	4
Details	binding site for residue EDO C 310

Chain	Residue
C	ARG35
C	GLU46
C	PRO47
C	ARG48

site_id	AG2
Number of Residues	6
Details	binding site for residue EDO C 311

Chain	Residue
A	ARG65
A	ASP69
A	HOH425
C	PRO276
C	EDO308
C	HOH438

site_id	AG3
Number of Residues	4
Details	binding site for residue EDO C 312

Chain	Residue
C	GLN32
C	ARG48
C	HOH560
D	EDO107

site_id	AG4
Number of Residues	6
Details	binding site for residue EDO C 313

Chain	Residue
C	TYR7
C	TYR159
C	SER167
C	TYR171
C	EKG316
C	HOH441

site_id	AG5
Number of Residues	8
Details	binding site for residue EDO C 314

Chain	Residue
A	ASP106
C	TYR85
C	GLN87
C	TYR118
C	ASP119
C	ARG121
C	EDO309
D	HOH202

site_id	AG6
Number of Residues	7
Details	binding site for residue EDO C 315

Chain	Residue
C	PHE8
C	TYR27
C	ASP29
C	ASP30
C	HOH406
C	HOH563
D	EDO106

site_id	AG7
Number of Residues	12
Details	binding site for residue EKG C 316

Chain	Residue
C	TYR7
C	ARG66
C	VAL67
C	ALA70
C	PHE74
C	THR97
C	MET98
C	SER99
C	TRP156
C	TYR159
C	EDO313
C	HOH441

site_id	AG8
Number of Residues	8
Details	binding site for residue EDO D 101

Chain	Residue
C	PHE8
C	MET98
C	GLN115
D	SER57
D	LYS58
D	TRP60
D	HOH210
D	HOH211

site_id	AG9
Number of Residues	7
Details	binding site for residue EDO D 102

Chain	Residue
C	ARG234
C	GLN242
D	TYR10
D	SER11
D	HIS13
D	PRO14
D	HOH234

site_id	AH1
Number of Residues	4
Details	binding site for residue EDO D 103

Chain	Residue
D	GLU36
D	ASP38
D	ARG81
D	ASN83

site_id	AH2
Number of Residues	6
Details	binding site for residue EDO D 104

Chain	Residue
C	ARG21
D	HIS51
D	SER52
D	ASP53
D	LEU54
D	HOH218

site_id	AH3
Number of Residues	5
Details	binding site for residue EDO D 105

Chain	Residue
C	GLY120
C	ARG121
C	HOH506
D	ARG3
D	ASP59

site_id	AH4
Number of Residues	6
Details	binding site for residue EDO D 106

Chain	Residue
C	EDO315
D	SER57
D	TYR63
D	HOH236
D	HOH247
D	HOH248

site_id	AH5
Number of Residues	8
Details	binding site for residue EDO D 107

Chain	Residue
C	TYR27
C	PRO235
C	EDO312
D	SER52
D	TYR63
D	HOH203
D	HOH215
D	HOH224

Functional Information from PROSITE/UniProt

site_id	PS00290
Number of Residues	7
Details	IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YACRVNH

Chain	Residue	Details
B	TYR78-HIS84
A	TYR257-HIS263

219869

PDB entries from 2024-05-15

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