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6LAH

Crystal structure of rhesus macaque MHC class I molecule Mamu-B*098 complexed with lysophosphatidylcholine

Functional Information from GO Data
ChainGOidnamespacecontents
B0006955biological_processimmune response
B0042612cellular_componentMHC class I protein complex
D0006955biological_processimmune response
D0042612cellular_componentMHC class I protein complex
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue ZN A 301
ChainResidue
AGLU58
AGLU61
CHIS191
CALA199
CGLU254

site_idAC2
Number of Residues5
Detailsbinding site for residue EDO A 302
ChainResidue
AHOH412
APHE8
ATYR27
AASP29
AASP30

site_idAC3
Number of Residues5
Detailsbinding site for residue EDO A 303
ChainResidue
AGLY207
AASP238
ATHR240
AHOH405
AHOH417

site_idAC4
Number of Residues6
Detailsbinding site for residue EDO A 304
ChainResidue
ATYR85
AARG121
AASP122
AASP137
AHOH419
CEDO320

site_idAC5
Number of Residues7
Detailsbinding site for residue EDO A 305
ChainResidue
AASP122
ATYR123
AILE124
AALA125
ATHR134
AALA136
AHOH428

site_idAC6
Number of Residues4
Detailsbinding site for residue EDO A 306
ChainResidue
AARG35
AGLU46
APRO47
AARG48

site_idAC7
Number of Residues6
Detailsbinding site for residue EDO A 307
ChainResidue
ATYR7
ATYR159
AGLU163
ASER167
ATYR171
AHOH435

site_idAC8
Number of Residues4
Detailsbinding site for residue EDO A 308
ChainResidue
ATYR114
ATRP147
AVAL152
ATRP156

site_idAC9
Number of Residues10
Detailsbinding site for residue EKG A 309
ChainResidue
ATYR7
AVAL67
AALA70
ATHR97
AMET98
ASER99
AGLN155
ATRP156
ATYR159
AHOH435

site_idAD1
Number of Residues5
Detailsbinding site for residue EDO B 101
ChainResidue
BGLN8
BVAL9
BVAL93
BLYS94
BASP96

site_idAD2
Number of Residues6
Detailsbinding site for residue EDO B 102
ChainResidue
APHE8
AMET98
BSER57
BLYS58
BTRP60
BHOH202

site_idAD3
Number of Residues7
Detailsbinding site for residue EDO B 103
ChainResidue
AARG234
AGLN242
BTYR10
BSER11
BHIS13
BPRO14
BHOH236

site_idAD4
Number of Residues3
Detailsbinding site for residue EDO B 104
ChainResidue
AARG17
AARG21
BASP34

site_idAD5
Number of Residues6
Detailsbinding site for residue EDO B 105
ChainResidue
BGLU36
BASP38
BARG81
BASN83
BPRO90
BHOH224

site_idAD6
Number of Residues5
Detailsbinding site for residue ZN C 301
ChainResidue
AHIS191
AALA199
AGLU254
CGLU58
CGLU61

site_idAD7
Number of Residues4
Detailsbinding site for residue ZN C 302
ChainResidue
AGLU138
CALA0
CHIS3
CGLN180

site_idAD8
Number of Residues5
Detailsbinding site for residue ZN C 303
ChainResidue
AHOH539
CHIS197
CHOH437
DGLU36
DHOH213

site_idAD9
Number of Residues4
Detailsbinding site for residue ZN C 304
ChainResidue
AALA0
AHIS3
AHOH521
CGLU138

site_idAE1
Number of Residues2
Detailsbinding site for residue ZN C 305
ChainResidue
CHIS192
DASP98

site_idAE2
Number of Residues5
Detailsbinding site for residue EDO C 306
ChainResidue
CPHE8
CASP30
CHOH404
CHOH422
CHOH509

site_idAE3
Number of Residues2
Detailsbinding site for residue EDO C 307
ChainResidue
CLEU230
CLYS243

site_idAE4
Number of Residues5
Detailsbinding site for residue EDO C 308
ChainResidue
CSER42
CASN127
CGLU128
CASP129
CHOH519

site_idAE5
Number of Residues3
Detailsbinding site for residue EDO C 309
ChainResidue
CARG108
CLEU109
CGLU161

site_idAE6
Number of Residues6
Detailsbinding site for residue EDO C 310
ChainResidue
CALA0
CLEU179
CGLN180
CGLU264
CHOH408
CHOH431

site_idAE7
Number of Residues5
Detailsbinding site for residue EDO C 311
ChainResidue
AASP137
AGLU138
CGLY1
CPRO105
CHOH471

site_idAE8
Number of Residues5
Detailsbinding site for residue EDO C 312
ChainResidue
CSER2
CHIS3
CSER4
CASP29
CHOH431

site_idAE9
Number of Residues2
Detailsbinding site for residue EDO C 313
ChainResidue
CARG48
DEDO104

site_idAF1
Number of Residues4
Detailsbinding site for residue EDO C 314
ChainResidue
CPRO15
CGLY16
CARG17
CGLY18

site_idAF2
Number of Residues7
Detailsbinding site for residue EDO C 315
ChainResidue
APRO15
AALA90
CPRO50
CTRP51
CGLN54
CHOH450
CHOH501

site_idAF3
Number of Residues4
Detailsbinding site for residue EDO C 316
ChainResidue
CTHR178
CARG181
CGLY239
CHOH505

site_idAF4
Number of Residues5
Detailsbinding site for residue EDO C 317
ChainResidue
CTYR7
CTYR159
CSER167
CTYR171
CHOH497

site_idAF5
Number of Residues4
Detailsbinding site for residue EDO C 318
ChainResidue
CTYR114
CTRP147
CTRP156
CHOH433

site_idAF6
Number of Residues5
Detailsbinding site for residue EDO C 319
ChainResidue
CARG6
CMET98
CGLN115
DLYS58
DEDO103

site_idAF7
Number of Residues9
Detailsbinding site for residue EDO C 320
ChainResidue
ATYR85
AGLN87
ATYR118
AASP119
AEDO304
AHOH419
AHOH432
BALA0
CASP106

site_idAF8
Number of Residues12
Detailsbinding site for residue EKG C 321
ChainResidue
CTYR7
CSER9
CARG66
CVAL67
CALA70
CPHE74
CTHR97
CMET98
CSER99
CGLN155
CTRP156
CTYR159

site_idAF9
Number of Residues9
Detailsbinding site for residue EDO D 101
ChainResidue
CTRP204
CLEU206
CARG234
CGLN242
DTYR10
DSER11
DHIS13
DPRO14
DHOH221

site_idAG1
Number of Residues4
Detailsbinding site for residue EDO D 102
ChainResidue
DSER57
DLYS58
DASP59
DHOH211

site_idAG2
Number of Residues7
Detailsbinding site for residue EDO D 103
ChainResidue
CMET98
CGLN115
CEDO319
DSER57
DLYS58
DTRP60
DHOH216

site_idAG3
Number of Residues5
Detailsbinding site for residue EDO D 104
ChainResidue
CEDO313
DSER52
DLEU65
DHOH205
DHOH214

Functional Information from PROSITE/UniProt
site_idPS00290
Number of Residues7
DetailsIG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YACRVNH
ChainResidueDetails
BTYR78-HIS84
ATYR257-HIS263

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PDB entries from 2024-11-06

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