6L9Z

338 bp di-nucleosome assembled with linker histone H1.X

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0000786	cellular_component	nucleosome
A	0003677	molecular_function	DNA binding
A	0005515	molecular_function	protein binding
A	0005576	cellular_component	extracellular region
A	0005634	cellular_component	nucleus
A	0005654	cellular_component	nucleoplasm
A	0005694	cellular_component	chromosome
A	0006325	biological_process	chromatin organization
A	0006334	biological_process	nucleosome assembly
A	0016020	cellular_component	membrane
A	0030527	molecular_function	structural constituent of chromatin
A	0031492	molecular_function	nucleosomal DNA binding
A	0031507	biological_process	heterochromatin formation
A	0032200	biological_process	telomere organization
A	0032991	cellular_component	protein-containing complex
A	0040029	biological_process	epigenetic regulation of gene expression
A	0045296	molecular_function	cadherin binding
A	0046982	molecular_function	protein heterodimerization activity
A	0070062	cellular_component	extracellular exosome
B	0000781	cellular_component	chromosome, telomeric region
B	0000786	cellular_component	nucleosome
B	0003677	molecular_function	DNA binding
B	0003723	molecular_function	RNA binding
B	0005515	molecular_function	protein binding
B	0005576	cellular_component	extracellular region
B	0005634	cellular_component	nucleus
B	0005654	cellular_component	nucleoplasm
B	0005694	cellular_component	chromosome
B	0006325	biological_process	chromatin organization
B	0006334	biological_process	nucleosome assembly
B	0016020	cellular_component	membrane
B	0030527	molecular_function	structural constituent of chromatin
B	0032200	biological_process	telomere organization
B	0032991	cellular_component	protein-containing complex
B	0045653	biological_process	negative regulation of megakaryocyte differentiation
B	0046982	molecular_function	protein heterodimerization activity
B	0061644	biological_process	protein localization to CENP-A containing chromatin
B	0070062	cellular_component	extracellular exosome
C	0000786	cellular_component	nucleosome
C	0003677	molecular_function	DNA binding
C	0005515	molecular_function	protein binding
C	0005634	cellular_component	nucleus
C	0005654	cellular_component	nucleoplasm
C	0005694	cellular_component	chromosome
C	0006325	biological_process	chromatin organization
C	0008285	biological_process	negative regulation of cell population proliferation
C	0030527	molecular_function	structural constituent of chromatin
C	0031507	biological_process	heterochromatin formation
C	0046982	molecular_function	protein heterodimerization activity
C	0061644	biological_process	protein localization to CENP-A containing chromatin
C	0070062	cellular_component	extracellular exosome
D	0000786	cellular_component	nucleosome
D	0001530	molecular_function	lipopolysaccharide binding
D	0002227	biological_process	innate immune response in mucosa
D	0003677	molecular_function	DNA binding
D	0005515	molecular_function	protein binding
D	0005615	cellular_component	extracellular space
D	0005634	cellular_component	nucleus
D	0005654	cellular_component	nucleoplasm
D	0005694	cellular_component	chromosome
D	0005886	cellular_component	plasma membrane
D	0006325	biological_process	chromatin organization
D	0006334	biological_process	nucleosome assembly
D	0010804	biological_process	negative regulation of tumor necrosis factor-mediated signaling pathway
D	0019731	biological_process	antibacterial humoral response
D	0030527	molecular_function	structural constituent of chromatin
D	0031640	biological_process	killing of cells of another organism
D	0042742	biological_process	defense response to bacterium
D	0046982	molecular_function	protein heterodimerization activity
D	0050829	biological_process	defense response to Gram-negative bacterium
D	0050830	biological_process	defense response to Gram-positive bacterium
D	0061644	biological_process	protein localization to CENP-A containing chromatin
D	0061844	biological_process	antimicrobial humoral immune response mediated by antimicrobial peptide
E	0000786	cellular_component	nucleosome
E	0003677	molecular_function	DNA binding
E	0005515	molecular_function	protein binding
E	0005576	cellular_component	extracellular region
E	0005634	cellular_component	nucleus
E	0005654	cellular_component	nucleoplasm
E	0005694	cellular_component	chromosome
E	0006325	biological_process	chromatin organization
E	0006334	biological_process	nucleosome assembly
E	0016020	cellular_component	membrane
E	0030527	molecular_function	structural constituent of chromatin
E	0031492	molecular_function	nucleosomal DNA binding
E	0031507	biological_process	heterochromatin formation
E	0032200	biological_process	telomere organization
E	0032991	cellular_component	protein-containing complex
E	0040029	biological_process	epigenetic regulation of gene expression
E	0045296	molecular_function	cadherin binding
E	0046982	molecular_function	protein heterodimerization activity
E	0070062	cellular_component	extracellular exosome
F	0000781	cellular_component	chromosome, telomeric region
F	0000786	cellular_component	nucleosome
F	0003677	molecular_function	DNA binding
F	0003723	molecular_function	RNA binding
F	0005515	molecular_function	protein binding
F	0005576	cellular_component	extracellular region
F	0005634	cellular_component	nucleus
F	0005654	cellular_component	nucleoplasm
F	0005694	cellular_component	chromosome
F	0006325	biological_process	chromatin organization
F	0006334	biological_process	nucleosome assembly
F	0016020	cellular_component	membrane
F	0030527	molecular_function	structural constituent of chromatin
F	0032200	biological_process	telomere organization
F	0032991	cellular_component	protein-containing complex
F	0045653	biological_process	negative regulation of megakaryocyte differentiation
F	0046982	molecular_function	protein heterodimerization activity
F	0061644	biological_process	protein localization to CENP-A containing chromatin
F	0070062	cellular_component	extracellular exosome
G	0000786	cellular_component	nucleosome
G	0003677	molecular_function	DNA binding
G	0005515	molecular_function	protein binding
G	0005634	cellular_component	nucleus
G	0005654	cellular_component	nucleoplasm
G	0005694	cellular_component	chromosome
G	0006325	biological_process	chromatin organization
G	0008285	biological_process	negative regulation of cell population proliferation
G	0030527	molecular_function	structural constituent of chromatin
G	0031507	biological_process	heterochromatin formation
G	0046982	molecular_function	protein heterodimerization activity
G	0061644	biological_process	protein localization to CENP-A containing chromatin
G	0070062	cellular_component	extracellular exosome
H	0000786	cellular_component	nucleosome
H	0001530	molecular_function	lipopolysaccharide binding
H	0002227	biological_process	innate immune response in mucosa
H	0003677	molecular_function	DNA binding
H	0005515	molecular_function	protein binding
H	0005615	cellular_component	extracellular space
H	0005634	cellular_component	nucleus
H	0005654	cellular_component	nucleoplasm
H	0005694	cellular_component	chromosome
H	0005886	cellular_component	plasma membrane
H	0006325	biological_process	chromatin organization
H	0006334	biological_process	nucleosome assembly
H	0010804	biological_process	negative regulation of tumor necrosis factor-mediated signaling pathway
H	0019731	biological_process	antibacterial humoral response
H	0030527	molecular_function	structural constituent of chromatin
H	0031640	biological_process	killing of cells of another organism
H	0042742	biological_process	defense response to bacterium
H	0046982	molecular_function	protein heterodimerization activity
H	0050829	biological_process	defense response to Gram-negative bacterium
H	0050830	biological_process	defense response to Gram-positive bacterium
H	0061644	biological_process	protein localization to CENP-A containing chromatin
H	0061844	biological_process	antimicrobial humoral immune response mediated by antimicrobial peptide
K	0000786	cellular_component	nucleosome
K	0003677	molecular_function	DNA binding
K	0005515	molecular_function	protein binding
K	0005576	cellular_component	extracellular region
K	0005634	cellular_component	nucleus
K	0005654	cellular_component	nucleoplasm
K	0005694	cellular_component	chromosome
K	0006325	biological_process	chromatin organization
K	0006334	biological_process	nucleosome assembly
K	0016020	cellular_component	membrane
K	0030527	molecular_function	structural constituent of chromatin
K	0031492	molecular_function	nucleosomal DNA binding
K	0031507	biological_process	heterochromatin formation
K	0032200	biological_process	telomere organization
K	0032991	cellular_component	protein-containing complex
K	0040029	biological_process	epigenetic regulation of gene expression
K	0045296	molecular_function	cadherin binding
K	0046982	molecular_function	protein heterodimerization activity
K	0070062	cellular_component	extracellular exosome
L	0000781	cellular_component	chromosome, telomeric region
L	0000786	cellular_component	nucleosome
L	0003677	molecular_function	DNA binding
L	0003723	molecular_function	RNA binding
L	0005515	molecular_function	protein binding
L	0005576	cellular_component	extracellular region
L	0005634	cellular_component	nucleus
L	0005654	cellular_component	nucleoplasm
L	0005694	cellular_component	chromosome
L	0006325	biological_process	chromatin organization
L	0006334	biological_process	nucleosome assembly
L	0016020	cellular_component	membrane
L	0030527	molecular_function	structural constituent of chromatin
L	0032200	biological_process	telomere organization
L	0032991	cellular_component	protein-containing complex
L	0045653	biological_process	negative regulation of megakaryocyte differentiation
L	0046982	molecular_function	protein heterodimerization activity
L	0061644	biological_process	protein localization to CENP-A containing chromatin
L	0070062	cellular_component	extracellular exosome
M	0000786	cellular_component	nucleosome
M	0003677	molecular_function	DNA binding
M	0005515	molecular_function	protein binding
M	0005634	cellular_component	nucleus
M	0005654	cellular_component	nucleoplasm
M	0005694	cellular_component	chromosome
M	0006325	biological_process	chromatin organization
M	0008285	biological_process	negative regulation of cell population proliferation
M	0030527	molecular_function	structural constituent of chromatin
M	0031507	biological_process	heterochromatin formation
M	0046982	molecular_function	protein heterodimerization activity
M	0061644	biological_process	protein localization to CENP-A containing chromatin
M	0070062	cellular_component	extracellular exosome
N	0000786	cellular_component	nucleosome
N	0001530	molecular_function	lipopolysaccharide binding
N	0002227	biological_process	innate immune response in mucosa
N	0003677	molecular_function	DNA binding
N	0005515	molecular_function	protein binding
N	0005615	cellular_component	extracellular space
N	0005634	cellular_component	nucleus
N	0005654	cellular_component	nucleoplasm
N	0005694	cellular_component	chromosome
N	0005886	cellular_component	plasma membrane
N	0006325	biological_process	chromatin organization
N	0006334	biological_process	nucleosome assembly
N	0010804	biological_process	negative regulation of tumor necrosis factor-mediated signaling pathway
N	0019731	biological_process	antibacterial humoral response
N	0030527	molecular_function	structural constituent of chromatin
N	0031640	biological_process	killing of cells of another organism
N	0042742	biological_process	defense response to bacterium
N	0046982	molecular_function	protein heterodimerization activity
N	0050829	biological_process	defense response to Gram-negative bacterium
N	0050830	biological_process	defense response to Gram-positive bacterium
N	0061644	biological_process	protein localization to CENP-A containing chromatin
N	0061844	biological_process	antimicrobial humoral immune response mediated by antimicrobial peptide
O	0000786	cellular_component	nucleosome
O	0003677	molecular_function	DNA binding
O	0005515	molecular_function	protein binding
O	0005576	cellular_component	extracellular region
O	0005634	cellular_component	nucleus
O	0005654	cellular_component	nucleoplasm
O	0005694	cellular_component	chromosome
O	0006325	biological_process	chromatin organization
O	0006334	biological_process	nucleosome assembly
O	0016020	cellular_component	membrane
O	0030527	molecular_function	structural constituent of chromatin
O	0031492	molecular_function	nucleosomal DNA binding
O	0031507	biological_process	heterochromatin formation
O	0032200	biological_process	telomere organization
O	0032991	cellular_component	protein-containing complex
O	0040029	biological_process	epigenetic regulation of gene expression
O	0045296	molecular_function	cadherin binding
O	0046982	molecular_function	protein heterodimerization activity
O	0070062	cellular_component	extracellular exosome
P	0000781	cellular_component	chromosome, telomeric region
P	0000786	cellular_component	nucleosome
P	0003677	molecular_function	DNA binding
P	0003723	molecular_function	RNA binding
P	0005515	molecular_function	protein binding
P	0005576	cellular_component	extracellular region
P	0005634	cellular_component	nucleus
P	0005654	cellular_component	nucleoplasm
P	0005694	cellular_component	chromosome
P	0006325	biological_process	chromatin organization
P	0006334	biological_process	nucleosome assembly
P	0016020	cellular_component	membrane
P	0030527	molecular_function	structural constituent of chromatin
P	0032200	biological_process	telomere organization
P	0032991	cellular_component	protein-containing complex
P	0045653	biological_process	negative regulation of megakaryocyte differentiation
P	0046982	molecular_function	protein heterodimerization activity
P	0061644	biological_process	protein localization to CENP-A containing chromatin
P	0070062	cellular_component	extracellular exosome
Q	0000786	cellular_component	nucleosome
Q	0003677	molecular_function	DNA binding
Q	0005515	molecular_function	protein binding
Q	0005634	cellular_component	nucleus
Q	0005654	cellular_component	nucleoplasm
Q	0005694	cellular_component	chromosome
Q	0006325	biological_process	chromatin organization
Q	0008285	biological_process	negative regulation of cell population proliferation
Q	0030527	molecular_function	structural constituent of chromatin
Q	0031507	biological_process	heterochromatin formation
Q	0046982	molecular_function	protein heterodimerization activity
Q	0061644	biological_process	protein localization to CENP-A containing chromatin
Q	0070062	cellular_component	extracellular exosome
R	0000786	cellular_component	nucleosome
R	0001530	molecular_function	lipopolysaccharide binding
R	0002227	biological_process	innate immune response in mucosa
R	0003677	molecular_function	DNA binding
R	0005515	molecular_function	protein binding
R	0005615	cellular_component	extracellular space
R	0005634	cellular_component	nucleus
R	0005654	cellular_component	nucleoplasm
R	0005694	cellular_component	chromosome
R	0005886	cellular_component	plasma membrane
R	0006325	biological_process	chromatin organization
R	0006334	biological_process	nucleosome assembly
R	0010804	biological_process	negative regulation of tumor necrosis factor-mediated signaling pathway
R	0019731	biological_process	antibacterial humoral response
R	0030527	molecular_function	structural constituent of chromatin
R	0031640	biological_process	killing of cells of another organism
R	0042742	biological_process	defense response to bacterium
R	0046982	molecular_function	protein heterodimerization activity
R	0050829	biological_process	defense response to Gram-negative bacterium
R	0050830	biological_process	defense response to Gram-positive bacterium
R	0061644	biological_process	protein localization to CENP-A containing chromatin
R	0061844	biological_process	antimicrobial humoral immune response mediated by antimicrobial peptide
S	0000786	cellular_component	nucleosome
S	0003677	molecular_function	DNA binding
S	0003690	molecular_function	double-stranded DNA binding
S	0003723	molecular_function	RNA binding
S	0005634	cellular_component	nucleus
S	0005654	cellular_component	nucleoplasm
S	0005694	cellular_component	chromosome
S	0005730	cellular_component	nucleolus
S	0006334	biological_process	nucleosome assembly
S	0030261	biological_process	chromosome condensation
S	0030527	molecular_function	structural constituent of chromatin
S	0031492	molecular_function	nucleosomal DNA binding
S	0045296	molecular_function	cadherin binding
S	0045910	biological_process	negative regulation of DNA recombination

Functional Information from PDB Data

site_id	AC1
Number of Residues	2
Details	binding site for residue CL A 201

Chain	Residue
A	PRO121
A	LYS122

---

site_id	AC2
Number of Residues	2
Details	binding site for residue CA C 201

Chain	Residue
C	HOH310
D	HOH306

---

site_id	AC3
Number of Residues	2
Details	binding site for residue CA C 202

Chain	Residue
D	GLU113
D	HOH305

---

site_id	AC4
Number of Residues	2
Details	binding site for residue CA C 203

Chain	Residue
C	GLU92
C	HOH309

---

site_id	AC5
Number of Residues	5
Details	binding site for residue CL C 204

Chain	Residue
C	ALA45
C	GLY46
D	THR90
D	SER91
C	GLY44

---

site_id	AC6
Number of Residues	2
Details	binding site for residue K C 205

Chain	Residue
C	ASN38
G	ASN38

---

site_id	AC7
Number of Residues	3
Details	binding site for residue CA D 201

Chain	Residue
C	GLU64
C	HOH304
D	VAL48

---

site_id	AC8
Number of Residues	2
Details	binding site for residue CL E 201

Chain	Residue
E	PRO121
E	LYS122

---

site_id	AC9
Number of Residues	1
Details	binding site for residue CA G 201

Chain	Residue
G	ASP72

---

site_id	AD1
Number of Residues	1
Details	binding site for residue CA G 202

Chain	Residue
G	HOH304

---

site_id	AD2
Number of Residues	1
Details	binding site for residue CA G 203

Chain	Residue
G	ASP90

---

site_id	AD3
Number of Residues	6
Details	binding site for residue CL G 204

Chain	Residue
G	GLY44
G	ALA45
G	GLY46
G	ALA47
H	THR90
H	SER91

---

site_id	AD4
Number of Residues	3
Details	binding site for residue CA I 401

Chain	Residue
I	DG112
I	HOH506
I	HOH545

---

site_id	AD5
Number of Residues	1
Details	binding site for residue CA I 402

Chain	Residue
I	HOH502

---

site_id	AD6
Number of Residues	3
Details	binding site for residue CA I 403

Chain	Residue
I	HOH511
J	HOH511
J	HOH545

---

site_id	AD7
Number of Residues	2
Details	binding site for residue CA I 404

Chain	Residue
I	DC136
J	DC202

---

site_id	AD8
Number of Residues	2
Details	binding site for residue CA I 405

Chain	Residue
I	DC190
J	DG148

---

site_id	AD9
Number of Residues	2
Details	binding site for residue CA I 406

Chain	Residue
I	HOH536
I	HOH540

---

site_id	AE1
Number of Residues	3
Details	binding site for residue CA I 407

Chain	Residue
I	DC197
I	HOH520
J	HOH543

---

site_id	AE2
Number of Residues	2
Details	binding site for residue CA I 408

Chain	Residue
I	HOH510
J	HOH514

---

site_id	AE3
Number of Residues	1
Details	binding site for residue CA I 409

Chain	Residue
J	HOH502

---

site_id	AE4
Number of Residues	3
Details	binding site for residue CA I 410

Chain	Residue
I	HOH527
I	HOH541
J	HOH528

---

site_id	AE5
Number of Residues	4
Details	binding site for residue CA I 411

Chain	Residue
I	HOH521
I	HOH544
J	HOH517
J	HOH527

---

site_id	AE6
Number of Residues	2
Details	binding site for residue CA I 412

Chain	Residue
I	DC305
J	DC33

---

site_id	AE7
Number of Residues	2
Details	binding site for residue CA I 413

Chain	Residue
I	DG33
J	DG305

---

site_id	AE8
Number of Residues	1
Details	binding site for residue CA I 414

Chain	Residue
I	DG133

---

site_id	AE9
Number of Residues	1
Details	binding site for residue CA I 415

Chain	Residue
I	DC252

---

site_id	AF1
Number of Residues	1
Details	binding site for residue CA I 418

Chain	Residue
I	DG302

---

site_id	AF2
Number of Residues	1
Details	binding site for residue CA I 419

Chain	Residue
I	DG220

---

site_id	AF3
Number of Residues	1
Details	binding site for residue CA I 420

Chain	Residue
I	DC103

---

site_id	AF4
Number of Residues	1
Details	binding site for residue CA I 422

Chain	Residue
I	DG24

---

site_id	AF5
Number of Residues	1
Details	binding site for residue CA I 423

Chain	Residue
I	HOH504

---

site_id	AF6
Number of Residues	1
Details	binding site for residue CA I 424

Chain	Residue
J	HOH518

---

site_id	AF7
Number of Residues	2
Details	binding site for residue CA I 427

Chain	Residue
I	DA282
I	DA283

---

site_id	AF8
Number of Residues	1
Details	binding site for residue CA I 428

Chain	Residue
I	DA241

---

site_id	AF9
Number of Residues	5
Details	binding site for residue K I 429

Chain	Residue
I	DT228
I	DA229
I	HOH525
J	HOH529
J	HOH538

---

site_id	AG1
Number of Residues	4
Details	binding site for residue K I 430

Chain	Residue
I	DT59
I	DA60
I	HOH534
J	DA282

---

site_id	AG2
Number of Residues	4
Details	binding site for residue K I 431

Chain	Residue
I	HOH501
I	HOH505
I	HOH542
J	HOH521

---

site_id	AG3
Number of Residues	4
Details	binding site for residue K I 432

Chain	Residue
I	HOH507
I	HOH543
J	HOH515
J	HOH523

---

site_id	AG4
Number of Residues	1
Details	binding site for residue K I 433

Chain	Residue
I	HOH535

---

site_id	AG5
Number of Residues	2
Details	binding site for residue CA J 401

Chain	Residue
I	DG202
J	DG136

---

site_id	AG6
Number of Residues	4
Details	binding site for residue CA J 402

Chain	Residue
I	DG137
I	DT138
J	DA201
J	DC202

---

site_id	AG7
Number of Residues	2
Details	binding site for residue CA J 403

Chain	Residue
J	HOH520
J	HOH535

---

site_id	AG8
Number of Residues	1
Details	binding site for residue CA J 404

Chain	Residue
I	HOH530

---

site_id	AG9
Number of Residues	3
Details	binding site for residue CA J 405

Chain	Residue
J	HOH544
J	DG193
J	HOH534

---

site_id	AH1
Number of Residues	2
Details	binding site for residue CA J 406

Chain	Residue
J	DA132
J	DG133

---

site_id	AH2
Number of Residues	3
Details	binding site for residue CA J 407

Chain	Residue
I	HOH509
J	HOH503
J	HOH539

---

site_id	AH3
Number of Residues	3
Details	binding site for residue CA J 408

Chain	Residue
J	DA113
J	DG114
J	HOH540

---

site_id	AH4
Number of Residues	2
Details	binding site for residue CA J 410

Chain	Residue
J	DG61
J	HOH546

---

site_id	AH5
Number of Residues	1
Details	binding site for residue CA J 411

Chain	Residue
J	DA71

---

site_id	AH6
Number of Residues	1
Details	binding site for residue CA J 412

Chain	Residue
J	DG103

---

site_id	AH7
Number of Residues	3
Details	binding site for residue CA J 413

Chain	Residue
J	DG316
J	DG317
J	HOH533

---

site_id	AH8
Number of Residues	1
Details	binding site for residue CA J 414

Chain	Residue
I	HOH512

---

site_id	AH9
Number of Residues	2
Details	binding site for residue CA J 415

Chain	Residue
I	HOH522
J	HOH510

---

site_id	AI1
Number of Residues	2
Details	binding site for residue CA J 419

Chain	Residue
I	HOH519
J	HOH532

---

site_id	AI2
Number of Residues	1
Details	binding site for residue CA J 420

Chain	Residue
J	DC224

---

site_id	AI3
Number of Residues	2
Details	binding site for residue CA J 421

Chain	Residue
J	DA82
J	DC83

---

site_id	AI4
Number of Residues	2
Details	binding site for residue CA J 423

Chain	Residue
J	DG154
J	DT155

---

site_id	AI5
Number of Residues	5
Details	binding site for residue K J 424

Chain	Residue
I	HOH513
J	DT59
J	DA60
J	HOH513
J	HOH531

---

site_id	AI6
Number of Residues	4
Details	binding site for residue K J 425

Chain	Residue
J	DT228
J	DA229
J	HOH509
J	HOH516

---

site_id	AI7
Number of Residues	2
Details	binding site for residue CL K 201

Chain	Residue
K	PRO121
K	LYS122

---

site_id	AI8
Number of Residues	1
Details	binding site for residue CA M 202

Chain	Residue
N	GLU113

---

site_id	AI9
Number of Residues	5
Details	binding site for residue CL M 203

Chain	Residue
M	GLY44
M	GLY46
M	ALA47
N	THR90
N	SER91

---

site_id	AJ1
Number of Residues	3
Details	binding site for residue K M 204

Chain	Residue
M	ASN38
Q	ASN38
Q	HOH304

---

site_id	AJ2
Number of Residues	2
Details	binding site for residue CA N 201

Chain	Residue
M	HOH309
N	VAL48

---

site_id	AJ3
Number of Residues	2
Details	binding site for residue CA N 202

Chain	Residue
N	ASP68
N	GLU71

---

site_id	AJ4
Number of Residues	2
Details	binding site for residue CL O 201

Chain	Residue
O	PRO121
O	LYS122

---

site_id	AJ5
Number of Residues	2
Details	binding site for residue CA Q 201

Chain	Residue
Q	ASP90
Q	HOH309

---

site_id	AJ6
Number of Residues	5
Details	binding site for residue CL Q 203

Chain	Residue
Q	GLY44
Q	GLY46
Q	ALA47
R	THR90
R	SER91

---

site_id	AJ7
Number of Residues	3
Details	binding site for residue CA R 201

Chain	Residue
R	ARG99
R	LEU100
R	LEU102

---

Functional Information from PROSITE/UniProt

site_id	PS00046
Number of Residues	7
Details	HISTONE_H2A Histone H2A signature. AGLqFPV

Chain	Residue	Details
C	ALA21-VAL27

---

site_id	PS00047
Number of Residues	5
Details	HISTONE_H4 Histone H4 signature. GAKRH

Chain	Residue	Details
B	GLY14-HIS18

---

site_id	PS00322
Number of Residues	7
Details	HISTONE_H3_1 Histone H3 signature 1. KAPRKQL

Chain	Residue	Details
A	LYS14-LEU20

---

site_id	PS00357
Number of Residues	23
Details	HISTONE_H2B Histone H2B signature. REIQTavRlLLpGELaKHAVSEG

Chain	Residue	Details
D	ARG92-GLY114

---

site_id	PS00959
Number of Residues	9
Details	HISTONE_H3_2 Histone H3 signature 2. PFqRLVREI

Chain	Residue	Details
A	PRO66-ILE74

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	4
Details	Modified residue: {"description":"Phosphotyrosine","evidences":[{"source":"PubMed","id":"19783980","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	33
Details	Modified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"PubMed","id":"22389435","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI3
Number of Residues	4
Details	Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"20850016","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI4
Number of Residues	4
Details	Modified residue: {"description":"N6-methyllysine; alternate","evidences":[{"source":"PubMed","id":"16267050","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"17194708","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI5
Number of Residues	4
Details	Modified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"PubMed","id":"22389435","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"29211711","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI6
Number of Residues	4
Details	Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"PubMed","id":"20850016","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI7
Number of Residues	4
Details	Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P84243","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI8
Number of Residues	4
Details	Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"UniProtKB","id":"Q71DI3","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI9
Number of Residues	12
Details	Modified residue: {"description":"N6-glutaryllysine; alternate","evidences":[{"source":"PubMed","id":"31542297","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI10
Number of Residues	4
Details	Modified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"PubMed","id":"22389435","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"27436229","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI11
Number of Residues	2
Details	Modified residue: {"description":"N6-methyllysine; alternate","evidences":[{"source":"PubMed","id":"15983376","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16185088","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16267050","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16627869","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"17194708","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI12
Number of Residues	3
Details	Modified residue: {"description":"N6-methyllysine; alternate","evidences":[{"source":"PubMed","id":"15983376","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI13
Number of Residues	4
Details	Modified residue: {"description":"N6-methyllysine; alternate","evidences":[{"source":"PubMed","id":"12086618","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"15964846","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"17967882","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"20622854","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"27338793","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"32209475","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI14
Number of Residues	6
Details	Modified residue: {"description":"N6-propionyllysine; alternate","evidences":[{"source":"PubMed","id":"17267393","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI15
Number of Residues	4
Details	Modified residue: {"description":"Phosphoserine; by PAK2","evidences":[{"source":"PubMed","id":"21724829","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"17081983","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"18669648","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"19690332","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"20068231","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"21406692","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"24275569","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI16
Number of Residues	4
Details	Modified residue: {"description":"Phosphotyrosine","evidences":[{"source":"PubMed","id":"15592455","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"20068231","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI17
Number of Residues	8
Details	Modified residue: {"description":"N6-methacryllysine; alternate","evidences":[{"source":"PubMed","id":"34961760","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI18
Number of Residues	4
Details	Modified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"UniProtKB","id":"P62806","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI19
Number of Residues	4
Details	Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"UniProtKB","id":"P62806","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI20
Number of Residues	4
Details	Modified residue: {"description":"Phosphotyrosine","evidences":[{"source":"PubMed","id":"24275569","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI21
Number of Residues	12
Details	Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate","evidences":[{"source":"PubMed","id":"28112733","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI22
Number of Residues	8
Details	Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate","evidences":[{"source":"PubMed","id":"19818714","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI23
Number of Residues	4
Details	Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in UFM1); alternate","evidences":[{"source":"PubMed","id":"30886146","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI24
Number of Residues	8
Details	DNA binding: {}

Chain

Residue

Details

---

site_id	SWS_FT_FI25
Number of Residues	1
Details	Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate","evidences":[{"source":"PubMed","id":"25218447","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI26
Number of Residues	3
Details	Modified residue: {"description":"N6-benzoyllysine; alternate","evidences":[{"source":"PubMed","id":"30154464","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI27
Number of Residues	4
Details	Modified residue: {"description":"N6-isonicotinyllysine","evidences":[{"source":"PubMed","id":"34545082","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI28
Number of Residues	4
Details	Modified residue: {"description":"N6-crotonyllysine; alternate","evidences":[{"source":"PubMed","id":"21925322","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI29
Number of Residues	8
Details	Modified residue: {"description":"N6-(2-hydroxyisobutyryl)lysine","evidences":[{"source":"PubMed","id":"24681537","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI30
Number of Residues	4
Details	Modified residue: {"description":"N5-methylglutamine","evidences":[{"source":"PubMed","id":"24352239","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI31
Number of Residues	2
Details	Modified residue: {"description":"Phosphothreonine; by DCAF1","evidences":[{"source":"PubMed","id":"15078818","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"24140421","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI32
Number of Residues	3
Details	Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate","evidences":[{"source":"PubMed","id":"22713238","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"22980979","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI33
Number of Residues	8
Details	Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate","evidences":[{"source":"PubMed","id":"15386022","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16359901","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16702407","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"25470042","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI34
Number of Residues	4
Details	Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"PubMed","id":"22713238","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"22980979","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI35
Number of Residues	4
Details	Modified residue: {"description":"PolyADP-ribosyl glutamic acid","evidences":[{"source":"UniProtKB","id":"Q64475","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI36
Number of Residues	4
Details	Modified residue: {"description":"Phosphoserine; by AMPK","evidences":[{"source":"UniProtKB","id":"Q64475","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI37
Number of Residues	4
Details	Modified residue: {"description":"N6-lactoyllysine; alternate","evidences":[{"source":"PubMed","id":"31645732","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI38
Number of Residues	8
Details	Modified residue: {"description":"N6-methyllysine; alternate","evidences":[{"source":"PubMed","id":"16627869","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI39
Number of Residues	4
Details	Modified residue: {"description":"N6-isonicotinyllysine; alternate","evidences":[{"source":"PubMed","id":"34545082","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI40
Number of Residues	4
Details	Modified residue: {"description":"Dimethylated arginine","evidences":[{"source":"UniProtKB","id":"Q96A08","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI41
Number of Residues	8
Details	Modified residue: {"description":"Omega-N-methylarginine","evidences":[{"source":"UniProtKB","id":"Q96A08","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI42
Number of Residues	4
Details	Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"UniProtKB","id":"Q00729","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI43
Number of Residues	4
Details	Glycosylation: {"description":"O-linked (GlcNAc) serine","evidences":[{"source":"UniProtKB","id":"P62807","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI44
Number of Residues	4
Details	Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate","evidences":[{"source":"PubMed","id":"21726816","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI45
Number of Residues	8
Details	Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate","evidences":[{"source":"PubMed","id":"16307923","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16627869","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16713563","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI46
Number of Residues	74
Details	Domain: {"description":"H15","evidences":[{"source":"PROSITE-ProRule","id":"PRU00837","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI47
Number of Residues	1
Details	Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"PubMed","id":"19608861","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI48
Number of Residues	1
Details	Modified residue: {"description":"Citrulline","evidences":[{"source":"UniProtKB","id":"P43275","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI49
Number of Residues	2
Details	Modified residue: {"description":"N6-methacryllysine","evidences":[{"source":"UniProtKB","id":"P10412","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---