6L7P
cryo-EM structure of cyanobacteria NDH-1LdelV complex
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0003954 | molecular_function | NADH dehydrogenase activity |
| A | 0009060 | biological_process | aerobic respiration |
| A | 0016020 | cellular_component | membrane |
| A | 0016655 | molecular_function | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor |
| A | 0019684 | biological_process | photosynthesis, light reaction |
| A | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| A | 0042651 | cellular_component | thylakoid membrane |
| A | 0048038 | molecular_function | quinone binding |
| B | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
| B | 0016655 | molecular_function | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor |
| B | 0019684 | biological_process | photosynthesis, light reaction |
| B | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| B | 0042651 | cellular_component | thylakoid membrane |
| B | 0042773 | biological_process | ATP synthesis coupled electron transport |
| B | 0048038 | molecular_function | quinone binding |
| B | 1902600 | biological_process | proton transmembrane transport |
| C | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
| C | 0016651 | molecular_function | oxidoreductase activity, acting on NAD(P)H |
| C | 0016655 | molecular_function | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor |
| C | 0019684 | biological_process | photosynthesis, light reaction |
| C | 0030964 | cellular_component | NADH dehydrogenase complex |
| C | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| C | 0042651 | cellular_component | thylakoid membrane |
| C | 0048038 | molecular_function | quinone binding |
| C | 1902600 | biological_process | proton transmembrane transport |
| D | 0003954 | molecular_function | NADH dehydrogenase activity |
| D | 0005515 | molecular_function | protein binding |
| D | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
| D | 0009060 | biological_process | aerobic respiration |
| D | 0015990 | biological_process | electron transport coupled proton transport |
| D | 0016655 | molecular_function | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor |
| D | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| D | 0042651 | cellular_component | thylakoid membrane |
| D | 0042773 | biological_process | ATP synthesis coupled electron transport |
| D | 0048038 | molecular_function | quinone binding |
| D | 0048039 | molecular_function | ubiquinone binding |
| E | 0016020 | cellular_component | membrane |
| E | 0016651 | molecular_function | oxidoreductase activity, acting on NAD(P)H |
| E | 0016655 | molecular_function | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor |
| E | 0019684 | biological_process | photosynthesis, light reaction |
| E | 0030964 | cellular_component | NADH dehydrogenase complex |
| E | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| E | 0042651 | cellular_component | thylakoid membrane |
| E | 0042773 | biological_process | ATP synthesis coupled electron transport |
| E | 0048038 | molecular_function | quinone binding |
| F | 0003954 | molecular_function | NADH dehydrogenase activity |
| F | 0005515 | molecular_function | protein binding |
| F | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
| F | 0012505 | cellular_component | endomembrane system |
| F | 0015990 | biological_process | electron transport coupled proton transport |
| F | 0016020 | cellular_component | membrane |
| F | 0042773 | biological_process | ATP synthesis coupled electron transport |
| F | 0048038 | molecular_function | quinone binding |
| G | 0005886 | cellular_component | plasma membrane |
| G | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
| G | 0048038 | molecular_function | quinone binding |
| G | 1902495 | cellular_component | transmembrane transporter complex |
| G | 1902600 | biological_process | proton transmembrane transport |
| H | 0016651 | molecular_function | oxidoreductase activity, acting on NAD(P)H |
| H | 0016655 | molecular_function | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor |
| H | 0019684 | biological_process | photosynthesis, light reaction |
| H | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| H | 0042651 | cellular_component | thylakoid membrane |
| H | 0048038 | molecular_function | quinone binding |
| H | 0051287 | molecular_function | NAD binding |
| I | 0005506 | molecular_function | iron ion binding |
| I | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
| I | 0016020 | cellular_component | membrane |
| I | 0016651 | molecular_function | oxidoreductase activity, acting on NAD(P)H |
| I | 0016655 | molecular_function | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor |
| I | 0019684 | biological_process | photosynthesis, light reaction |
| I | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| I | 0042651 | cellular_component | thylakoid membrane |
| I | 0046872 | molecular_function | metal ion binding |
| I | 0048038 | molecular_function | quinone binding |
| I | 0051536 | molecular_function | iron-sulfur cluster binding |
| I | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
| I | 1902600 | biological_process | proton transmembrane transport |
| J | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
| J | 0016651 | molecular_function | oxidoreductase activity, acting on NAD(P)H |
| J | 0016655 | molecular_function | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor |
| J | 0019684 | biological_process | photosynthesis, light reaction |
| J | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| J | 0042651 | cellular_component | thylakoid membrane |
| J | 0048038 | molecular_function | quinone binding |
| J | 1902600 | biological_process | proton transmembrane transport |
| K | 0005506 | molecular_function | iron ion binding |
| K | 0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity |
| K | 0009060 | biological_process | aerobic respiration |
| K | 0015990 | biological_process | electron transport coupled proton transport |
| K | 0016655 | molecular_function | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor |
| K | 0019684 | biological_process | photosynthesis, light reaction |
| K | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| K | 0042651 | cellular_component | thylakoid membrane |
| K | 0045271 | cellular_component | respiratory chain complex I |
| K | 0046872 | molecular_function | metal ion binding |
| K | 0048038 | molecular_function | quinone binding |
| K | 0051536 | molecular_function | iron-sulfur cluster binding |
| K | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
| L | 0016655 | molecular_function | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor |
| L | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| L | 0042651 | cellular_component | thylakoid membrane |
| L | 0048038 | molecular_function | quinone binding |
| M | 0016655 | molecular_function | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor |
| M | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| M | 0042651 | cellular_component | thylakoid membrane |
| M | 0048038 | molecular_function | quinone binding |
| N | 0016020 | cellular_component | membrane |
| N | 0016655 | molecular_function | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor |
| N | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| N | 0042651 | cellular_component | thylakoid membrane |
| N | 0048038 | molecular_function | quinone binding |
| O | 0005886 | cellular_component | plasma membrane |
| O | 0016655 | molecular_function | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor |
| O | 0031676 | cellular_component | plasma membrane-derived thylakoid membrane |
| O | 0042651 | cellular_component | thylakoid membrane |
| O | 0048038 | molecular_function | quinone binding |
| S | 0009767 | biological_process | photosynthetic electron transport chain |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 6 |
| Details | binding site for residue BCR A 401 |
| Chain | Residue |
| A | PHE320 |
| A | PHE323 |
| A | LEU324 |
| A | DGD405 |
| L | PHE46 |
| L | PHE49 |
| site_id | AC2 |
| Number of Residues | 4 |
| Details | binding site for residue LHG A 402 |
| Chain | Residue |
| I | TYR10 |
| A | TRP220 |
| H | ILE199 |
| H | ARG202 |
| site_id | AC3 |
| Number of Residues | 5 |
| Details | binding site for residue LHG A 403 |
| Chain | Residue |
| A | LEU27 |
| C | TYR19 |
| C | GLU20 |
| C | PHE22 |
| G | GLN8 |
| site_id | AC4 |
| Number of Residues | 13 |
| Details | binding site for residue DGD A 404 |
| Chain | Residue |
| A | ASP6 |
| A | LEU7 |
| A | GLN8 |
| A | TRP29 |
| A | PRO33 |
| A | MET36 |
| A | PHE119 |
| A | ASN122 |
| A | LEU123 |
| A | LEU124 |
| A | ILE125 |
| A | DGD405 |
| C | TYR21 |
| site_id | AC5 |
| Number of Residues | 10 |
| Details | binding site for residue DGD A 405 |
| Chain | Residue |
| A | ILE5 |
| A | LEU7 |
| A | GLN121 |
| A | ASN122 |
| A | TRP280 |
| A | GLN303 |
| A | ALA307 |
| A | BCR401 |
| A | DGD404 |
| L | TYR20 |
| site_id | AC6 |
| Number of Residues | 3 |
| Details | binding site for residue AJP A 406 |
| Chain | Residue |
| A | LEU362 |
| A | PHE370 |
| A | AJP407 |
| site_id | AC7 |
| Number of Residues | 6 |
| Details | binding site for residue AJP A 407 |
| Chain | Residue |
| A | TYR202 |
| A | LEU205 |
| A | SER206 |
| A | ARG211 |
| A | ALA369 |
| A | AJP406 |
| site_id | AC8 |
| Number of Residues | 3 |
| Details | binding site for residue AJP A 408 |
| Chain | Residue |
| A | TYR202 |
| A | PRO283 |
| A | PRO285 |
| site_id | AC9 |
| Number of Residues | 8 |
| Details | binding site for residue PQN B 601 |
| Chain | Residue |
| B | TYR45 |
| B | PHE338 |
| B | GLY456 |
| B | ARG458 |
| B | GLY463 |
| B | THR467 |
| B | LHG602 |
| B | LHG603 |
| site_id | AD1 |
| Number of Residues | 2 |
| Details | binding site for residue LHG B 602 |
| Chain | Residue |
| B | ARG41 |
| B | PQN601 |
| site_id | AD2 |
| Number of Residues | 3 |
| Details | binding site for residue LHG B 603 |
| Chain | Residue |
| B | ARG458 |
| B | MET466 |
| B | PQN601 |
| site_id | AD3 |
| Number of Residues | 5 |
| Details | binding site for residue AJP B 604 |
| Chain | Residue |
| B | ILE59 |
| B | PHE82 |
| B | LEU334 |
| B | LEU484 |
| B | AJP605 |
| site_id | AD4 |
| Number of Residues | 7 |
| Details | binding site for residue AJP B 605 |
| Chain | Residue |
| B | LEU89 |
| B | PHE338 |
| B | PRO480 |
| B | LEU481 |
| B | LEU484 |
| B | AJP604 |
| B | AJP606 |
| site_id | AD5 |
| Number of Residues | 6 |
| Details | binding site for residue AJP B 606 |
| Chain | Residue |
| B | ALA470 |
| B | LEU473 |
| B | ALA474 |
| B | LEU477 |
| B | PRO480 |
| B | AJP605 |
| site_id | AD6 |
| Number of Residues | 4 |
| Details | binding site for residue AJP B 607 |
| Chain | Residue |
| B | LEU477 |
| B | ASN479 |
| B | PRO480 |
| D | AJP607 |
| site_id | AD7 |
| Number of Residues | 5 |
| Details | binding site for residue AJP B 608 |
| Chain | Residue |
| B | PRO370 |
| B | LEU374 |
| D | LEU19 |
| D | PHE23 |
| D | LHG603 |
| site_id | AD8 |
| Number of Residues | 6 |
| Details | binding site for residue AJP B 609 |
| Chain | Residue |
| B | ILE34 |
| C | VAL117 |
| C | VAL118 |
| C | VAL121 |
| C | ARG125 |
| C | AJP202 |
| site_id | AD9 |
| Number of Residues | 5 |
| Details | binding site for residue AJP B 610 |
| Chain | Residue |
| B | GLN35 |
| B | AJP611 |
| B | VAL27 |
| B | LEU30 |
| B | ALA31 |
| site_id | AE1 |
| Number of Residues | 1 |
| Details | binding site for residue AJP B 611 |
| Chain | Residue |
| B | AJP610 |
| site_id | AE2 |
| Number of Residues | 3 |
| Details | binding site for residue AJP B 612 |
| Chain | Residue |
| B | GLY409 |
| B | AJP614 |
| D | AJP614 |
| site_id | AE3 |
| Number of Residues | 5 |
| Details | binding site for residue AJP B 613 |
| Chain | Residue |
| B | LEU276 |
| B | VAL280 |
| B | LEU284 |
| B | AJP614 |
| F | PHE652 |
| site_id | AE4 |
| Number of Residues | 6 |
| Details | binding site for residue AJP B 614 |
| Chain | Residue |
| B | ILE283 |
| B | ILE287 |
| B | LEU410 |
| B | LEU413 |
| B | AJP612 |
| B | AJP613 |
| site_id | AE5 |
| Number of Residues | 6 |
| Details | binding site for residue AJP C 201 |
| Chain | Residue |
| A | LYS346 |
| A | PRO350 |
| A | VAL351 |
| C | TRP124 |
| C | AJP202 |
| I | GLN6 |
| site_id | AE6 |
| Number of Residues | 8 |
| Details | binding site for residue AJP C 202 |
| Chain | Residue |
| A | PRO350 |
| A | VAL354 |
| B | AJP609 |
| C | VAL117 |
| C | VAL121 |
| C | TRP124 |
| C | ARG125 |
| C | AJP201 |
| site_id | AE7 |
| Number of Residues | 10 |
| Details | binding site for residue BCR D 601 |
| Chain | Residue |
| D | MET378 |
| D | LEU471 |
| D | VAL472 |
| D | GLY476 |
| D | ILE477 |
| D | LEU483 |
| F | ILE27 |
| F | LHG702 |
| F | SQD703 |
| P | MET14 |
| site_id | AE8 |
| Number of Residues | 7 |
| Details | binding site for residue BCR D 602 |
| Chain | Residue |
| D | ILE290 |
| D | PHE421 |
| D | SQD605 |
| F | ILE231 |
| F | LEU235 |
| Q | ILE28 |
| Q | PHE31 |
| site_id | AE9 |
| Number of Residues | 7 |
| Details | binding site for residue LHG D 603 |
| Chain | Residue |
| B | TYR366 |
| B | PRO370 |
| B | LEU374 |
| B | AJP608 |
| D | LYS112 |
| D | ARG114 |
| D | PHE118 |
| site_id | AF1 |
| Number of Residues | 7 |
| Details | binding site for residue LHG D 604 |
| Chain | Residue |
| D | PHE97 |
| D | PRO461 |
| D | VAL464 |
| F | ALA28 |
| F | PHE29 |
| F | GLU31 |
| P | PHE25 |
| site_id | AF2 |
| Number of Residues | 9 |
| Details | binding site for residue SQD D 605 |
| Chain | Residue |
| D | TYR297 |
| D | ILE432 |
| D | SER436 |
| D | ARG439 |
| D | BCR602 |
| F | GLU173 |
| F | GLN176 |
| F | GLU587 |
| F | ILE591 |
| site_id | AF3 |
| Number of Residues | 7 |
| Details | binding site for residue SQD D 606 |
| Chain | Residue |
| B | TYR423 |
| B | LYS430 |
| D | GLN163 |
| D | TYR164 |
| D | THR167 |
| D | LYS168 |
| D | PRO230 |
| site_id | AF4 |
| Number of Residues | 8 |
| Details | binding site for residue AJP D 607 |
| Chain | Residue |
| B | ILE476 |
| B | AJP607 |
| D | LEU12 |
| D | TYR70 |
| D | ASP71 |
| D | TRP72 |
| D | TRP80 |
| D | AJP608 |
| site_id | AF5 |
| Number of Residues | 4 |
| Details | binding site for residue AJP D 608 |
| Chain | Residue |
| D | LEU12 |
| D | TYR70 |
| D | AJP607 |
| D | AJP609 |
| site_id | AF6 |
| Number of Residues | 5 |
| Details | binding site for residue AJP D 609 |
| Chain | Residue |
| D | PHE4 |
| D | THR9 |
| D | PHE13 |
| D | VAL16 |
| D | AJP608 |
| site_id | AF7 |
| Number of Residues | 4 |
| Details | binding site for residue AJP D 610 |
| Chain | Residue |
| D | ALA47 |
| D | TYR51 |
| D | AJP611 |
| D | AJP615 |
| site_id | AF8 |
| Number of Residues | 6 |
| Details | binding site for residue AJP D 611 |
| Chain | Residue |
| D | ALA47 |
| D | TYR51 |
| D | AJP610 |
| P | LEU12 |
| P | THR15 |
| P | ILE19 |
| site_id | AF9 |
| Number of Residues | 2 |
| Details | binding site for residue AJP D 612 |
| Chain | Residue |
| D | LEU413 |
| F | AJP706 |
| site_id | AG1 |
| Number of Residues | 4 |
| Details | binding site for residue AJP D 613 |
| Chain | Residue |
| D | LEU231 |
| D | PHE277 |
| D | VAL280 |
| Q | LEU40 |
| site_id | AG2 |
| Number of Residues | 10 |
| Details | binding site for residue AJP D 614 |
| Chain | Residue |
| B | TRP403 |
| B | TYR408 |
| B | AJP612 |
| D | PHE179 |
| D | VAL182 |
| D | ALA186 |
| D | TYR190 |
| D | PHE210 |
| D | LEU213 |
| D | GLY217 |
| site_id | AG3 |
| Number of Residues | 5 |
| Details | binding site for residue AJP D 615 |
| Chain | Residue |
| D | SER2 |
| D | TRP6 |
| D | PHE13 |
| D | PHE56 |
| D | AJP610 |
| site_id | AG4 |
| Number of Residues | 4 |
| Details | binding site for residue AJP D 616 |
| Chain | Residue |
| D | LEU479 |
| D | TYR480 |
| F | LHG702 |
| F | AJP709 |
| site_id | AG5 |
| Number of Residues | 13 |
| Details | binding site for residue LHG F 701 |
| Chain | Residue |
| F | PHE303 |
| F | ILE310 |
| F | THR311 |
| F | PHE444 |
| F | ARG448 |
| F | MET546 |
| F | MET554 |
| F | TYR555 |
| F | PRO562 |
| F | ILE565 |
| F | ALA566 |
| F | TYR573 |
| F | TRP580 |
| site_id | AG6 |
| Number of Residues | 4 |
| Details | binding site for residue LHG F 702 |
| Chain | Residue |
| D | BCR601 |
| D | AJP616 |
| F | PHE24 |
| P | PRO9 |
| site_id | AG7 |
| Number of Residues | 9 |
| Details | binding site for residue SQD F 703 |
| Chain | Residue |
| D | LYS373 |
| D | PHE376 |
| D | BCR601 |
| F | LEU26 |
| F | SER30 |
| F | SER34 |
| F | ARG123 |
| F | TYR127 |
| F | TYR166 |
| site_id | AG8 |
| Number of Residues | 3 |
| Details | binding site for residue AJP F 704 |
| Chain | Residue |
| F | LEU4 |
| F | GLY53 |
| F | THR57 |
| site_id | AG9 |
| Number of Residues | 7 |
| Details | binding site for residue AJP F 705 |
| Chain | Residue |
| F | PHE29 |
| F | THR32 |
| F | THR33 |
| F | LEU36 |
| F | SER40 |
| F | AJP711 |
| F | AJP712 |
| site_id | AH1 |
| Number of Residues | 4 |
| Details | binding site for residue AJP F 706 |
| Chain | Residue |
| D | AJP612 |
| F | TRP198 |
| F | ALA199 |
| F | LEU225 |
| site_id | AH2 |
| Number of Residues | 4 |
| Details | binding site for residue AJP F 707 |
| Chain | Residue |
| F | PHE244 |
| F | THR293 |
| F | TRP296 |
| F | PHE300 |
| site_id | AH3 |
| Number of Residues | 5 |
| Details | binding site for residue AJP F 708 |
| Chain | Residue |
| F | GLY611 |
| F | ASN614 |
| F | LEU615 |
| F | PHE618 |
| Q | AJP102 |
| site_id | AH4 |
| Number of Residues | 4 |
| Details | binding site for residue AJP F 709 |
| Chain | Residue |
| D | AJP616 |
| F | TRP9 |
| F | GLN71 |
| F | TYR87 |
| site_id | AH5 |
| Number of Residues | 4 |
| Details | binding site for residue AJP F 710 |
| Chain | Residue |
| F | GLY626 |
| F | LEU627 |
| F | TYR629 |
| F | LEU630 |
| site_id | AH6 |
| Number of Residues | 1 |
| Details | binding site for residue AJP F 711 |
| Chain | Residue |
| F | AJP705 |
| site_id | AH7 |
| Number of Residues | 4 |
| Details | binding site for residue AJP F 712 |
| Chain | Residue |
| F | LEU36 |
| F | PRO39 |
| F | PHE43 |
| F | AJP705 |
| site_id | AH8 |
| Number of Residues | 5 |
| Details | binding site for residue LHG G 301 |
| Chain | Residue |
| B | ASP2 |
| B | ALA7 |
| B | ALA12 |
| B | PHE125 |
| G | GLU148 |
| site_id | AH9 |
| Number of Residues | 5 |
| Details | binding site for residue AJP G 302 |
| Chain | Residue |
| A | LEU98 |
| A | VAL105 |
| A | MET148 |
| G | TYR34 |
| G | PHE37 |
| site_id | AI1 |
| Number of Residues | 5 |
| Details | binding site for residue AJP G 303 |
| Chain | Residue |
| G | LEU3 |
| G | THR7 |
| G | ILE10 |
| G | THR11 |
| G | AJP304 |
| site_id | AI2 |
| Number of Residues | 4 |
| Details | binding site for residue AJP G 304 |
| Chain | Residue |
| G | LEU6 |
| G | ILE10 |
| G | AJP303 |
| G | AJP305 |
| site_id | AI3 |
| Number of Residues | 3 |
| Details | binding site for residue AJP G 305 |
| Chain | Residue |
| G | ILE10 |
| G | PHE13 |
| G | AJP304 |
| site_id | AI4 |
| Number of Residues | 2 |
| Details | binding site for residue AJP G 306 |
| Chain | Residue |
| G | THR112 |
| G | LEU116 |
| site_id | AI5 |
| Number of Residues | 4 |
| Details | binding site for residue AJP G 307 |
| Chain | Residue |
| E | LEU12 |
| E | CYS15 |
| G | TRP94 |
| G | ALA101 |
| site_id | AI6 |
| Number of Residues | 6 |
| Details | binding site for residue SF4 I 201 |
| Chain | Residue |
| I | CYS73 |
| I | CYS103 |
| I | ILE104 |
| I | CYS106 |
| I | ALA107 |
| I | CYS109 |
| site_id | AI7 |
| Number of Residues | 5 |
| Details | binding site for residue SF4 I 202 |
| Chain | Residue |
| I | CYS63 |
| I | CYS66 |
| I | CYS69 |
| I | CYS113 |
| I | CYS117 |
| site_id | AI8 |
| Number of Residues | 8 |
| Details | binding site for residue SF4 K 301 |
| Chain | Residue |
| H | ARG69 |
| K | CYS52 |
| K | CYS53 |
| K | GLY88 |
| K | ALA116 |
| K | CYS117 |
| K | CYS148 |
| K | PRO149 |
| site_id | AI9 |
| Number of Residues | 10 |
| Details | binding site for residue SQD L 101 |
| Chain | Residue |
| A | ILE68 |
| K | ASP33 |
| K | TRP37 |
| L | ILE65 |
| L | ASN66 |
| L | ARG68 |
| N | GLY2 |
| N | PHE29 |
| N | ARG32 |
| N | VAL138 |
| site_id | AJ1 |
| Number of Residues | 1 |
| Details | binding site for residue AJP Q 101 |
| Chain | Residue |
| Q | TRP38 |
| site_id | AJ2 |
| Number of Residues | 5 |
| Details | binding site for residue AJP Q 102 |
| Chain | Residue |
| F | VAL608 |
| F | AJP708 |
| Q | PRO18 |
| Q | ILE21 |
| Q | ALA22 |
| site_id | AJ3 |
| Number of Residues | 5 |
| Details | binding site for residue AJP Q 103 |
| Chain | Residue |
| Q | LEU29 |
| Q | ILE32 |
| Q | ILE36 |
| Q | TRP37 |
| Q | HIS41 |
Functional Information from PROSITE/UniProt
| site_id | PS00107 |
| Number of Residues | 27 |
| Details | PROTEIN_KINASE_ATP Protein kinases ATP-binding region signature. VGIGLMGITVaYlmylkgtpspq.......AIAK |
| Chain | Residue | Details |
| F | VAL541-LYS567 |
| site_id | PS00198 |
| Number of Residues | 12 |
| Details | 4FE4S_FER_1 4Fe-4S ferredoxin-type iron-sulfur binding region signature. CiACEvCVrVCP |
| Chain | Residue | Details |
| I | CYS63-PRO74 | |
| I | CYS103-PRO114 |
| site_id | PS00535 |
| Number of Residues | 12 |
| Details | COMPLEX1_49K Respiratory chain NADH dehydrogenase 49 Kd subunit signature. LHRGmEKIaEnR |
| Chain | Residue | Details |
| H | LEU47-ARG58 |
| site_id | PS00542 |
| Number of Residues | 22 |
| Details | COMPLEX1_30K Respiratory chain NADH dehydrogenase 30 Kd subunit signature. EREsyDMFgivyegHpnlKrIL |
| Chain | Residue | Details |
| J | GLU121-LEU142 |
| site_id | PS00667 |
| Number of Residues | 16 |
| Details | COMPLEX1_ND1_1 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. GILApLaDGLKLIfKE |
| Chain | Residue | Details |
| A | GLY72-GLU87 |
| site_id | PS00668 |
| Number of Residues | 14 |
| Details | COMPLEX1_ND1_2 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. PFDLPEAEeeLVa.G |
| Chain | Residue | Details |
| A | PRO231-GLY244 |
| site_id | PS01036 |
| Number of Residues | 15 |
| Details | HSP70_3 Heat shock hsp70 proteins family signature 3. YgLsGGhTQLPaIaQ |
| Chain | Residue | Details |
| B | TYR185-GLN199 |
| site_id | PS01150 |
| Number of Residues | 17 |
| Details | COMPLEX1_20K Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. GvDKLIPVDVYlPgCPP |
| Chain | Residue | Details |
| K | GLY134-PRO150 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 180 |
| Details | Transmembrane: {"description":"Helical","evidences":[{"source":"HAMAP-Rule","id":"MF_01350","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 278 |
| Details | Transmembrane: {"description":"Helical","evidences":[{"source":"HAMAP-Rule","id":"MF_00445","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 100 |
| Details | Transmembrane: {"description":"Helical","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 260 |
| Details | Transmembrane: {"description":"Helical","evidences":[{"source":"HAMAP-Rule","id":"MF_00491","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI10 |
| Number of Residues | 29 |
| Details | Domain: {"description":"4Fe-4S ferredoxin-type 1","evidences":[{"source":"HAMAP-Rule","id":"MF_01351","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI11 |
| Number of Residues | 29 |
| Details | Domain: {"description":"4Fe-4S ferredoxin-type 2","evidences":[{"source":"HAMAP-Rule","id":"MF_01351","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI12 |
| Number of Residues | 8 |
| Details | Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_01351","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI13 |
| Number of Residues | 4 |
| Details | Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_01356","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
