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6L36

X-ray structure of human PPARalpha ligand binding domain-GW9662-fenofibric acid co-crystals obtained by delipidation and co-crystallization

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0004879molecular_functionnuclear receptor activity
A0005634cellular_componentnucleus
A0006355biological_processregulation of DNA-templated transcription
B0003677molecular_functionDNA binding
B0004879molecular_functionnuclear receptor activity
B0005634cellular_componentnucleus
B0006355biological_processregulation of DNA-templated transcription
Functional Information from PDB Data
site_idAC1
Number of Residues7
Detailsbinding site for residue GW9 A 501
ChainResidue
AILE241
ACYS276
ATHR279
ALEU321
AMET330
AVAL332
AGW9502

site_idAC2
Number of Residues8
Detailsbinding site for residue GW9 A 502
ChainResidue
ALEU254
ACYS275
ATHR279
AALA333
ATYR334
AGW9501
AALA250
AGLU251

site_idAC3
Number of Residues10
Detailsbinding site for residue GW9 A 503
ChainResidue
ALYS257
ALEU258
AASN261
AILE263
AHIS274
ACYS275
ACYS278
AALA455
ALEU456
AHIS457

site_idAC4
Number of Residues11
Detailsbinding site for residue F5A A 504
ChainResidue
AGLN277
ASER280
ATYR314
AHIS440
AVAL444
AILE447
ALYS448
AALA454
AALA455
ALEU456
ATYR464

site_idAC5
Number of Residues13
Detailsbinding site for residue F5A B 504
ChainResidue
BPHE273
BCYS276
BSER280
BTYR314
BHIS440
BVAL444
BILE447
BLYS448
BASP453
BALA454
BLEU456
BLEU460
BTYR464

site_idAC6
Number of Residues13
Detailsbinding site for Di-peptide GW9 B 501 and CYS B 276
ChainResidue
BILE241
BILE272
BPHE273
BHIS274
BCYS275
BGLN277
BCYS278
BTHR279
BSER280
BLEU321
BVAL332
BGW9502
BF5A504

site_idAC7
Number of Residues13
Detailsbinding site for Di-peptide GW9 B 502 and CYS B 275
ChainResidue
APHE421
BALA250
BLEU254
BLYS257
BARG271
BILE272
BHIS274
BCYS276
BGLN277
BCYS278
BTHR279
BGW9501
BGW9503

site_idAC8
Number of Residues13
Detailsbinding site for Di-peptide GW9 B 502 and CYS B 275
ChainResidue
APHE421
BALA250
BLEU254
BLYS257
BARG271
BILE272
BHIS274
BCYS276
BGLN277
BCYS278
BTHR279
BGW9501
BGW9503

site_idAC9
Number of Residues14
Detailsbinding site for Di-peptide GW9 B 503 and CYS B 278
ChainResidue
BGLU282
BALA455
BHIS457
BLEU254
BLYS257
BLEU258
BASN261
BHIS274
BCYS275
BCYS276
BGLN277
BTHR279
BSER280
BVAL281

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsBINDING: BINDING => ECO:0000269|PubMed:19116277, ECO:0007744|PDB:3ET1
ChainResidueDetails
ASER280
ATYR314
ATYR464
BSER280
BTYR314
BTYR464

site_idSWS_FT_FI2
Number of Residues2
DetailsSITE: Essential for heterodimerization with RXRA
ChainResidueDetails
ALEU433
BLEU433

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PDB entries from 2024-07-24

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