6KZ9
Crystal structure of plant Phospholipase D alpha
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0003824 | molecular_function | catalytic activity |
| A | 0004620 | molecular_function | glycerophospholipase activity |
| A | 0004630 | molecular_function | D-type glycerophospholipase activity |
| A | 0005096 | molecular_function | GTPase activator activity |
| A | 0005509 | molecular_function | calcium ion binding |
| A | 0005515 | molecular_function | protein binding |
| A | 0005546 | molecular_function | phosphatidylinositol-4,5-bisphosphate binding |
| A | 0005634 | cellular_component | nucleus |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0005739 | cellular_component | mitochondrion |
| A | 0005773 | cellular_component | vacuole |
| A | 0005829 | cellular_component | cytosol |
| A | 0005886 | cellular_component | plasma membrane |
| A | 0006629 | biological_process | lipid metabolic process |
| A | 0006631 | biological_process | fatty acid metabolic process |
| A | 0009506 | cellular_component | plasmodesma |
| A | 0009507 | cellular_component | chloroplast |
| A | 0009737 | biological_process | response to abscisic acid |
| A | 0009738 | biological_process | abscisic acid-activated signaling pathway |
| A | 0009789 | biological_process | positive regulation of abscisic acid-activated signaling pathway |
| A | 0009845 | biological_process | seed germination |
| A | 0010119 | biological_process | regulation of stomatal movement |
| A | 0010358 | biological_process | leaf shaping |
| A | 0016020 | cellular_component | membrane |
| A | 0030136 | cellular_component | clathrin-coated vesicle |
| A | 0031966 | cellular_component | mitochondrial membrane |
| A | 0046470 | biological_process | phosphatidylcholine metabolic process |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 4 |
| Details | binding site for residue CA A 901 |
| Chain | Residue |
| A | ASP187 |
| A | HIS372 |
| A | HIS406 |
| A | GLU722 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 39 |
| Details | Domain: {"description":"PLD phosphodiesterase 1","evidences":[{"source":"PROSITE-ProRule","id":"PRU00153","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 27 |
| Details | Domain: {"description":"PLD phosphodiesterase 2","evidences":[{"source":"PROSITE-ProRule","id":"PRU00153","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 6 |
| Details | Active site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU00153","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 4 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"31619765","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"6KZ8","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6KZ9","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 3 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"31619765","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"6KZ8","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
