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6KW9

Crystal Structure Analysis of Endo-beta-1,4-xylanase II Complexed with Xylotriose

Functional Information from GO Data
ChainGOidnamespacecontents
A0000272biological_processpolysaccharide catabolic process
A0004553molecular_functionhydrolase activity, hydrolyzing O-glycosyl compounds
A0005576cellular_componentextracellular region
A0005975biological_processcarbohydrate metabolic process
A0016787molecular_functionhydrolase activity
A0016798molecular_functionhydrolase activity, acting on glycosyl bonds
A0031176molecular_functionendo-1,4-beta-xylanase activity
A0045493biological_processxylan catabolic process
Functional Information from PDB Data
site_idAC1
Number of Residues8
Detailsbinding site for residue GOL A 201
ChainResidue
AASN61
ASER63
AASN82
APRO83
ATHR188
AVAL189
ASER190
AHOH302

site_idAC2
Number of Residues6
Detailsbinding site for residue GOL A 202
ChainResidue
AGLY24
AVAL25
ALYS56
AHOH420
AHOH459
AGLY23

site_idAC3
Number of Residues1
Detailsbinding site for residue IOD A 203
ChainResidue
AGLY112

site_idAC4
Number of Residues2
Detailsbinding site for residue IOD A 204
ChainResidue
AVAL114
AARG142

site_idAC5
Number of Residues2
Detailsbinding site for residue IOD A 205
ChainResidue
AVAL123
AGLN125

site_idAC6
Number of Residues3
Detailsbinding site for residue IOD A 206
ChainResidue
ATHR28
AGLN34
ASER36

Functional Information from PROSITE/UniProt
site_idPS00776
Number of Residues11
DetailsGH11_1 Glycosyl hydrolases family 11 (GH11) active site signature 1. PLiEYYIVEnF
ChainResidueDetails
APRO83-PHE93

site_idPS00777
Number of Residues12
DetailsGH11_2 Glycosyl hydrolases family 11 (GH11) active site signature 2. VavEGYFSSGsA
ChainResidueDetails
AVAL174-ALA185

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsActive site: {"description":"Nucleophile","evidences":[{"source":"PubMed","id":"26392527","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"24419374","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues1
DetailsActive site: {"description":"Proton donor","evidences":[{"source":"PubMed","id":"26392527","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"24419374","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues7
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"24419374","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues2
DetailsGlycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

245663

PDB entries from 2025-12-03

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