6KNH
Crystal structure of SbnH in complex with citrate, a PLP-dependent decarboxylase in Staphyloferrin B biothesynthesis
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0003824 | molecular_function | catalytic activity |
| A | 0006596 | biological_process | polyamine biosynthetic process |
| A | 0008836 | molecular_function | diaminopimelate decarboxylase activity |
| A | 0009089 | biological_process | lysine biosynthetic process via diaminopimelate |
| A | 0016829 | molecular_function | lyase activity |
| A | 0016831 | molecular_function | carboxy-lyase activity |
| B | 0003824 | molecular_function | catalytic activity |
| B | 0006596 | biological_process | polyamine biosynthetic process |
| B | 0008836 | molecular_function | diaminopimelate decarboxylase activity |
| B | 0009089 | biological_process | lysine biosynthetic process via diaminopimelate |
| B | 0016829 | molecular_function | lyase activity |
| B | 0016831 | molecular_function | carboxy-lyase activity |
| C | 0003824 | molecular_function | catalytic activity |
| C | 0006596 | biological_process | polyamine biosynthetic process |
| C | 0008836 | molecular_function | diaminopimelate decarboxylase activity |
| C | 0009089 | biological_process | lysine biosynthetic process via diaminopimelate |
| C | 0016829 | molecular_function | lyase activity |
| C | 0016831 | molecular_function | carboxy-lyase activity |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 11 |
| Details | binding site for residue CIT A 501 |
| Chain | Residue |
| A | ARG269 |
| B | THR345 |
| B | LYS347 |
| A | ARG304 |
| A | SER308 |
| A | TRP309 |
| A | TYR373 |
| A | ILE377 |
| A | HOH629 |
| A | HOH679 |
| A | HOH719 |
| site_id | AC2 |
| Number of Residues | 8 |
| Details | binding site for residue PO4 A 502 |
| Chain | Residue |
| A | GLY228 |
| A | CYS267 |
| A | GLY268 |
| A | ARG269 |
| A | TYR373 |
| A | HOH616 |
| A | HOH692 |
| A | HOH722 |
| site_id | AC3 |
| Number of Residues | 10 |
| Details | binding site for residue CIT B 501 |
| Chain | Residue |
| A | THR345 |
| A | LYS347 |
| B | ARG269 |
| B | ARG304 |
| B | SER308 |
| B | TRP309 |
| B | ILE377 |
| B | HOH619 |
| B | HOH637 |
| B | HOH738 |
| site_id | AC4 |
| Number of Residues | 8 |
| Details | binding site for residue PO4 B 502 |
| Chain | Residue |
| B | CYS267 |
| B | GLY268 |
| B | ARG269 |
| B | TYR373 |
| B | HOH606 |
| B | HOH656 |
| B | HOH690 |
| B | HOH714 |
| site_id | AC5 |
| Number of Residues | 10 |
| Details | binding site for residue CIT C 501 |
| Chain | Residue |
| C | ARG269 |
| C | ARG304 |
| C | SER308 |
| C | TRP309 |
| C | THR345 |
| C | LYS347 |
| C | ILE377 |
| C | HOH615 |
| C | HOH648 |
| C | HOH721 |
| site_id | AC6 |
| Number of Residues | 7 |
| Details | binding site for residue PO4 C 502 |
| Chain | Residue |
| C | CYS267 |
| C | GLY268 |
| C | ARG269 |
| C | TYR373 |
| C | HOH614 |
| C | HOH650 |
| C | HOH746 |
Functional Information from PROSITE/UniProt
