6KEH
Crystal structure of BRD4 bromodomain 1 (BD1) in complex with 6,16-dimethoxy-11-methyl-2-oxa-11-azatetracyclo[8.6.1.03,8.013,17]heptadeca-1(17),3,5,7,9,13,15-heptaen-12-one
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 3 |
| Details | binding site for residue FMT A 201 |
| Chain | Residue |
| A | LYS57 |
| A | LYS99 |
| A | LYS102 |
| site_id | AC2 |
| Number of Residues | 6 |
| Details | binding site for residue FMT A 202 |
| Chain | Residue |
| A | THR60 |
| A | GLN62 |
| A | ASN121 |
| A | ALA122 |
| A | FMT203 |
| A | HOH364 |
| site_id | AC3 |
| Number of Residues | 4 |
| Details | binding site for residue FMT A 203 |
| Chain | Residue |
| A | THR60 |
| A | ASN61 |
| A | GLN62 |
| A | FMT202 |
| site_id | AC4 |
| Number of Residues | 3 |
| Details | binding site for residue FMT A 204 |
| Chain | Residue |
| A | GLN78 |
| A | GLU163 |
| A | HOH303 |
| site_id | AC5 |
| Number of Residues | 9 |
| Details | binding site for residue D6R A 205 |
| Chain | Residue |
| A | TRP81 |
| A | PRO82 |
| A | GLN85 |
| A | LEU92 |
| A | ASP96 |
| A | TYR139 |
| A | ASN140 |
| A | ILE146 |
| A | HOH316 |
Functional Information from PROSITE/UniProt
| site_id | PS00633 |
| Number of Residues | 60 |
| Details | BROMODOMAIN_1 Bromodomain signature. AwpFqqpvDavklnlpDYYkiIktpMdmgtIkkrlenny..Ywnaqeciqdfnt.MftNCyiY |
| Chain | Residue | Details |
| A | ALA80-TYR139 | |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 106 |
| Details | Domain: {"description":"Bromo 1","evidences":[{"source":"PROSITE-ProRule","id":"PRU00035","evidenceCode":"ECO:0000255"}]} |
| site_id | SWS_FT_FI2 |
| Number of Residues | 1 |
| Details | Site: {"description":"Acetylated histone binding","evidences":[{"source":"PubMed","id":"22464331","evidenceCode":"ECO:0000269"}]} |
| site_id | SWS_FT_FI3 |
| Number of Residues | 2 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)","evidences":[{"source":"PubMed","id":"28112733","evidenceCode":"ECO:0007744"}]} |
