6K79
Glycerol kinase form Thermococcus kodakarensis, complex structure with substrate.
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0004370 | molecular_function | glycerol kinase activity |
| A | 0005524 | molecular_function | ATP binding |
| A | 0005829 | cellular_component | cytosol |
| A | 0005975 | biological_process | carbohydrate metabolic process |
| A | 0006071 | biological_process | glycerol metabolic process |
| A | 0006072 | biological_process | glycerol-3-phosphate metabolic process |
| A | 0016301 | molecular_function | kinase activity |
| A | 0016773 | molecular_function | phosphotransferase activity, alcohol group as acceptor |
| A | 0019563 | biological_process | glycerol catabolic process |
| B | 0004370 | molecular_function | glycerol kinase activity |
| B | 0005524 | molecular_function | ATP binding |
| B | 0005829 | cellular_component | cytosol |
| B | 0005975 | biological_process | carbohydrate metabolic process |
| B | 0006071 | biological_process | glycerol metabolic process |
| B | 0006072 | biological_process | glycerol-3-phosphate metabolic process |
| B | 0016301 | molecular_function | kinase activity |
| B | 0016773 | molecular_function | phosphotransferase activity, alcohol group as acceptor |
| B | 0019563 | biological_process | glycerol catabolic process |
| C | 0004370 | molecular_function | glycerol kinase activity |
| C | 0005524 | molecular_function | ATP binding |
| C | 0005829 | cellular_component | cytosol |
| C | 0005975 | biological_process | carbohydrate metabolic process |
| C | 0006071 | biological_process | glycerol metabolic process |
| C | 0006072 | biological_process | glycerol-3-phosphate metabolic process |
| C | 0016301 | molecular_function | kinase activity |
| C | 0016773 | molecular_function | phosphotransferase activity, alcohol group as acceptor |
| C | 0019563 | biological_process | glycerol catabolic process |
| D | 0004370 | molecular_function | glycerol kinase activity |
| D | 0005524 | molecular_function | ATP binding |
| D | 0005829 | cellular_component | cytosol |
| D | 0005975 | biological_process | carbohydrate metabolic process |
| D | 0006071 | biological_process | glycerol metabolic process |
| D | 0006072 | biological_process | glycerol-3-phosphate metabolic process |
| D | 0016301 | molecular_function | kinase activity |
| D | 0016773 | molecular_function | phosphotransferase activity, alcohol group as acceptor |
| D | 0019563 | biological_process | glycerol catabolic process |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 5 |
| Details | binding site for residue PGE B 501 |
| Chain | Residue |
| B | TYR132 |
| B | PHE264 |
| B | SER298 |
| B | ILE299 |
| B | PHE300 |
| site_id | AC2 |
| Number of Residues | 6 |
| Details | binding site for residue GOL B 502 |
| Chain | Residue |
| B | ASP239 |
| B | PHE264 |
| B | ARG82 |
| B | GLU83 |
| B | TRP101 |
| B | TYR132 |
| site_id | AC3 |
| Number of Residues | 6 |
| Details | binding site for residue PGE C 501 |
| Chain | Residue |
| C | TRP101 |
| C | PHE264 |
| C | SER298 |
| C | ILE299 |
| C | PHE300 |
| C | HOH656 |
| site_id | AC4 |
| Number of Residues | 6 |
| Details | binding site for residue GOL C 502 |
| Chain | Residue |
| C | ARG82 |
| C | GLU83 |
| C | TRP101 |
| C | TYR132 |
| C | ASP239 |
| C | PHE264 |
| site_id | AC5 |
| Number of Residues | 3 |
| Details | binding site for residue PGE D 501 |
| Chain | Residue |
| D | TRP101 |
| D | TYR132 |
| D | PHE300 |
| site_id | AC6 |
| Number of Residues | 7 |
| Details | binding site for residue GOL D 502 |
| Chain | Residue |
| D | GLN81 |
| D | ARG82 |
| D | GLU83 |
| D | TRP101 |
| D | TYR132 |
| D | ASP239 |
| D | PHE264 |
| site_id | AC7 |
| Number of Residues | 5 |
| Details | binding site for residue PGE A 501 |
| Chain | Residue |
| A | TYR132 |
| A | PHE264 |
| A | ILE299 |
| A | PHE300 |
| A | HOH700 |
| site_id | AC8 |
| Number of Residues | 7 |
| Details | binding site for residue GOL A 502 |
| Chain | Residue |
| A | GLN81 |
| A | ARG82 |
| A | GLU83 |
| A | TRP101 |
| A | TYR132 |
| A | ASP239 |
| A | PHE264 |
Functional Information from PROSITE/UniProt
| site_id | PS00445 |
| Number of Residues | 21 |
| Details | FGGY_KINASES_2 FGGY family of carbohydrate kinases signature 2. GiIIGItrgtgre.HLARATLE |
| Chain | Residue | Details |
| B | GLY355-GLU375 | |
| C | GLY355-GLU375 |
| site_id | PS00933 |
| Number of Residues | 13 |
| Details | FGGY_KINASES_1 FGGY family of carbohydrate kinases signature 1. YfSasKLKWLLDN |
| Chain | Residue | Details |
| B | TYR132-ASN144 | |
| C | TYR132-ASN144 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 42 |
| Details | BINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00186 |
| Chain | Residue | Details |
| A | SER14 | |
| A | ARG16 | |
| A | ARG82 | |
| A | GLU83 | |
| A | TYR132 | |
| A | ASP239 | |
| A | GLN240 | |
| A | THR261 | |
| A | GLY303 | |
| A | GLN307 | |
| A | GLY402 | |
| A | ASN406 | |
| C | THR261 | |
| C | GLY303 | |
| C | GLN307 | |
| C | GLY402 | |
| C | ASN406 | |
| D | THR12 | |
| D | THR13 | |
| D | SER14 | |
| D | ARG16 | |
| D | ARG82 | |
| C | THR13 | |
| D | GLU83 | |
| D | TYR132 | |
| D | ASP239 | |
| D | GLN240 | |
| D | THR261 | |
| D | GLY303 | |
| D | GLN307 | |
| D | GLY402 | |
| D | ASN406 | |
| A | THR12 | |
| C | SER14 | |
| A | THR13 | |
| C | ARG16 | |
| C | ARG82 | |
| C | GLU83 | |
| C | TYR132 | |
| C | ASP239 | |
| C | GLN240 | |
| C | THR12 |
