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6K78

Glycerol kinase form Thermococcus kodakarensis, complex structure with substrate.

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0004370molecular_functionglycerol kinase activity
A0005524molecular_functionATP binding
A0005829cellular_componentcytosol
A0005975biological_processcarbohydrate metabolic process
A0006071biological_processglycerol metabolic process
A0006072biological_processglycerol-3-phosphate metabolic process
A0016301molecular_functionkinase activity
A0016740molecular_functiontransferase activity
A0016773molecular_functionphosphotransferase activity, alcohol group as acceptor
A0019563biological_processglycerol catabolic process
B0000166molecular_functionnucleotide binding
B0004370molecular_functionglycerol kinase activity
B0005524molecular_functionATP binding
B0005829cellular_componentcytosol
B0005975biological_processcarbohydrate metabolic process
B0006071biological_processglycerol metabolic process
B0006072biological_processglycerol-3-phosphate metabolic process
B0016301molecular_functionkinase activity
B0016740molecular_functiontransferase activity
B0016773molecular_functionphosphotransferase activity, alcohol group as acceptor
B0019563biological_processglycerol catabolic process
C0000166molecular_functionnucleotide binding
C0004370molecular_functionglycerol kinase activity
C0005524molecular_functionATP binding
C0005829cellular_componentcytosol
C0005975biological_processcarbohydrate metabolic process
C0006071biological_processglycerol metabolic process
C0006072biological_processglycerol-3-phosphate metabolic process
C0016301molecular_functionkinase activity
C0016740molecular_functiontransferase activity
C0016773molecular_functionphosphotransferase activity, alcohol group as acceptor
C0019563biological_processglycerol catabolic process
D0000166molecular_functionnucleotide binding
D0004370molecular_functionglycerol kinase activity
D0005524molecular_functionATP binding
D0005829cellular_componentcytosol
D0005975biological_processcarbohydrate metabolic process
D0006071biological_processglycerol metabolic process
D0006072biological_processglycerol-3-phosphate metabolic process
D0016301molecular_functionkinase activity
D0016740molecular_functiontransferase activity
D0016773molecular_functionphosphotransferase activity, alcohol group as acceptor
D0019563biological_processglycerol catabolic process
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue PGE A 601
ChainResidue
ATRP101
APHE264
APHE300
AHOH716

site_idAC2
Number of Residues7
Detailsbinding site for residue GOL A 602
ChainResidue
AASP239
APHE264
AGLN81
AARG82
AGLU83
ATRP101
ATYR132

site_idAC3
Number of Residues7
Detailsbinding site for residue PGE B 601
ChainResidue
BTRP101
BARG104
BPHE264
BSER298
BILE299
BPHE300
BHOH757

site_idAC4
Number of Residues7
Detailsbinding site for residue GOL B 602
ChainResidue
BGLN81
BARG82
BGLU83
BTRP101
BTYR132
BASP239
BPHE264

site_idAC5
Number of Residues6
Detailsbinding site for residue PGE C 601
ChainResidue
CTHR261
CPHE264
CSER298
CPHE300
CHOH747
CHOH758

site_idAC6
Number of Residues7
Detailsbinding site for residue GOL C 602
ChainResidue
CGLN81
CARG82
CGLU83
CTRP101
CTYR132
CASP239
CPHE264

site_idAC7
Number of Residues4
Detailsbinding site for residue PGE D 601
ChainResidue
DTYR132
DPHE264
DILE299
DPHE300

site_idAC8
Number of Residues7
Detailsbinding site for residue GOL D 602
ChainResidue
DGLN81
DARG82
DGLU83
DTRP101
DTYR132
DASP239
DPHE264

Functional Information from PROSITE/UniProt
site_idPS00445
Number of Residues21
DetailsFGGY_KINASES_2 FGGY family of carbohydrate kinases signature 2. GiIIGItrgtgre.HLARATLE
ChainResidueDetails
AGLY355-GLU375
BGLY355-GLU375

site_idPS00933
Number of Residues13
DetailsFGGY_KINASES_1 FGGY family of carbohydrate kinases signature 1. YfSasKLKWLLDN
ChainResidueDetails
ATYR132-ASN144
BTYR132-ASN144

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues56
DetailsBinding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_00186","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

247536

PDB entries from 2026-01-14

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