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6K1D

Crystal structure of EXD2 exonuclease domain soaked in Mn and GMP

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0006139biological_processnucleobase-containing compound metabolic process
A0008408molecular_function3'-5' exonuclease activity
B0003676molecular_functionnucleic acid binding
B0006139biological_processnucleobase-containing compound metabolic process
B0008408molecular_function3'-5' exonuclease activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue MN A 301
ChainResidue
AASP108
AHOH402
AHOH404
AHOH405
AHOH408
AHOH410

site_idAC2
Number of Residues5
Detailsbinding site for residue MN A 302
ChainResidue
BASP246
BHOH407
AASP108
AGLU110
AHOH405

site_idAC3
Number of Residues5
Detailsbinding site for residue MN A 303
ChainResidue
AASP246
BASP108
BGLU110
BHOH403
BHOH404

site_idAC4
Number of Residues5
Detailsbinding site for residue MN B 301
ChainResidue
BASP108
BHOH401
BHOH403
BHOH406
BHOH408

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:31127291, ECO:0007744|PDB:6K19, ECO:0007744|PDB:6K1A, ECO:0007744|PDB:6K1B, ECO:0007744|PDB:6K1C, ECO:0007744|PDB:6K1D, ECO:0007744|PDB:6K1E
ChainResidueDetails
AASP108
BASP108

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:31127291, ECO:0007744|PDB:6K18, ECO:0007744|PDB:6K1A, ECO:0007744|PDB:6K1B, ECO:0007744|PDB:6K1D, ECO:0007744|PDB:6K1E
ChainResidueDetails
AGLU110
AASP246
BGLU110
BASP246

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PDB entries from 2024-11-13

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