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6K0K

Crystal structure of Escherichia coli pyruvate kinase II

Functional Information from GO Data
ChainGOidnamespacecontents
A0000287molecular_functionmagnesium ion binding
A0003824molecular_functioncatalytic activity
A0004743molecular_functionpyruvate kinase activity
A0005515molecular_functionprotein binding
A0005524molecular_functionATP binding
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006096biological_processglycolytic process
A0016208molecular_functionAMP binding
A0016301molecular_functionkinase activity
A0030955molecular_functionpotassium ion binding
A0042802molecular_functionidentical protein binding
A0046872molecular_functionmetal ion binding
A1902912cellular_componentpyruvate kinase complex
B0000287molecular_functionmagnesium ion binding
B0003824molecular_functioncatalytic activity
B0004743molecular_functionpyruvate kinase activity
B0005515molecular_functionprotein binding
B0005524molecular_functionATP binding
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0006096biological_processglycolytic process
B0016208molecular_functionAMP binding
B0016301molecular_functionkinase activity
B0030955molecular_functionpotassium ion binding
B0042802molecular_functionidentical protein binding
B0046872molecular_functionmetal ion binding
B1902912cellular_componentpyruvate kinase complex
C0000287molecular_functionmagnesium ion binding
C0003824molecular_functioncatalytic activity
C0004743molecular_functionpyruvate kinase activity
C0005515molecular_functionprotein binding
C0005524molecular_functionATP binding
C0005737cellular_componentcytoplasm
C0005829cellular_componentcytosol
C0006096biological_processglycolytic process
C0016208molecular_functionAMP binding
C0016301molecular_functionkinase activity
C0030955molecular_functionpotassium ion binding
C0042802molecular_functionidentical protein binding
C0046872molecular_functionmetal ion binding
C1902912cellular_componentpyruvate kinase complex
D0000287molecular_functionmagnesium ion binding
D0003824molecular_functioncatalytic activity
D0004743molecular_functionpyruvate kinase activity
D0005515molecular_functionprotein binding
D0005524molecular_functionATP binding
D0005737cellular_componentcytoplasm
D0005829cellular_componentcytosol
D0006096biological_processglycolytic process
D0016208molecular_functionAMP binding
D0016301molecular_functionkinase activity
D0030955molecular_functionpotassium ion binding
D0042802molecular_functionidentical protein binding
D0046872molecular_functionmetal ion binding
D1902912cellular_componentpyruvate kinase complex
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue MG A 501
ChainResidue
AGLY189
AVAL190
ACYS216
AARG412
AHOH623

site_idAC2
Number of Residues7
Detailsbinding site for residue CIT A 502
ChainResidue
ALYS448
ATYR450
AHOH609
AGLY62
AARG63
AHIS64
APRO425

site_idAC3
Number of Residues3
Detailsbinding site for residue MG C 501
ChainResidue
CARG274
CGLY311
CARG397

site_idAC4
Number of Residues5
Detailsbinding site for residue MG C 502
ChainResidue
CGLU362
CTHR386
CSER388
CTHR391
CTHR471

site_idAC5
Number of Residues7
Detailsbinding site for residue CIT C 503
ChainResidue
CGLY62
CARG63
CHIS64
CPRO425
CLYS448
CTYR450
CHOH607

site_idAC6
Number of Residues5
Detailsbinding site for residue MG D 501
ChainResidue
DGLU362
DTHR386
DSER388
DTHR391
DTHR471

site_idAC7
Number of Residues6
Detailsbinding site for residue CIT D 502
ChainResidue
DGLY62
DHIS64
DPRO425
DLYS448
DTYR450
DHOH611

Functional Information from PROSITE/UniProt
site_idPS00110
Number of Residues13
DetailsPYRUVATE_KINASE Pyruvate kinase active site signature. AkIVAKVERaEAV
ChainResidueDetails
AALA218-VAL230

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues36
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:P30613
ChainResidueDetails
AARG36
BARG36
BASN38
BSER40
BASP70
BLYS223
BGLU225
BGLY251
BASP252
BTHR284
CARG36
AASN38
CASN38
CSER40
CASP70
CLYS223
CGLU225
CGLY251
CASP252
CTHR284
DARG36
DASN38
ASER40
DSER40
DASP70
DLYS223
DGLU225
DGLY251
DASP252
DTHR284
AASP70
ALYS223
AGLU225
AGLY251
AASP252
ATHR284

site_idSWS_FT_FI2
Number of Residues8
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:P14618
ChainResidueDetails
AARG77
ALYS160
BARG77
BLYS160
CARG77
CLYS160
DARG77
DLYS160

site_idSWS_FT_FI3
Number of Residues4
DetailsSITE: Transition state stabilizer => ECO:0000250|UniProtKB:P00549
ChainResidueDetails
ALYS223
BLYS223
CLYS223
DLYS223

site_idSWS_FT_FI4
Number of Residues4
DetailsMOD_RES: N6-acetyllysine => ECO:0000269|PubMed:18723842
ChainResidueDetails
ALYS351
BLYS351
CLYS351
DLYS351

223532

PDB entries from 2024-08-07

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