6JQ0
CryoEM structure of Abo1 Walker B (E372Q) mutant hexamer - ATP complex
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000785 | cellular_component | chromatin |
A | 0003682 | molecular_function | chromatin binding |
A | 0005524 | molecular_function | ATP binding |
A | 0005634 | cellular_component | nucleus |
A | 0005694 | cellular_component | chromosome |
A | 0006334 | biological_process | nucleosome assembly |
A | 0006337 | biological_process | nucleosome disassembly |
A | 0006338 | biological_process | chromatin remodeling |
A | 0016787 | molecular_function | hydrolase activity |
A | 0016887 | molecular_function | ATP hydrolysis activity |
A | 0042393 | molecular_function | histone binding |
A | 0045815 | biological_process | transcription initiation-coupled chromatin remodeling |
A | 0140665 | molecular_function | ATP-dependent H3-H4 histone complex chaperone activity |
B | 0000785 | cellular_component | chromatin |
B | 0003682 | molecular_function | chromatin binding |
B | 0005524 | molecular_function | ATP binding |
B | 0005634 | cellular_component | nucleus |
B | 0005694 | cellular_component | chromosome |
B | 0006334 | biological_process | nucleosome assembly |
B | 0006337 | biological_process | nucleosome disassembly |
B | 0006338 | biological_process | chromatin remodeling |
B | 0016787 | molecular_function | hydrolase activity |
B | 0016887 | molecular_function | ATP hydrolysis activity |
B | 0042393 | molecular_function | histone binding |
B | 0045815 | biological_process | transcription initiation-coupled chromatin remodeling |
B | 0140665 | molecular_function | ATP-dependent H3-H4 histone complex chaperone activity |
C | 0000785 | cellular_component | chromatin |
C | 0003682 | molecular_function | chromatin binding |
C | 0005524 | molecular_function | ATP binding |
C | 0005634 | cellular_component | nucleus |
C | 0005694 | cellular_component | chromosome |
C | 0006334 | biological_process | nucleosome assembly |
C | 0006337 | biological_process | nucleosome disassembly |
C | 0006338 | biological_process | chromatin remodeling |
C | 0016787 | molecular_function | hydrolase activity |
C | 0016887 | molecular_function | ATP hydrolysis activity |
C | 0042393 | molecular_function | histone binding |
C | 0045815 | biological_process | transcription initiation-coupled chromatin remodeling |
C | 0140665 | molecular_function | ATP-dependent H3-H4 histone complex chaperone activity |
D | 0000785 | cellular_component | chromatin |
D | 0003682 | molecular_function | chromatin binding |
D | 0005524 | molecular_function | ATP binding |
D | 0005634 | cellular_component | nucleus |
D | 0005694 | cellular_component | chromosome |
D | 0006334 | biological_process | nucleosome assembly |
D | 0006337 | biological_process | nucleosome disassembly |
D | 0006338 | biological_process | chromatin remodeling |
D | 0016787 | molecular_function | hydrolase activity |
D | 0016887 | molecular_function | ATP hydrolysis activity |
D | 0042393 | molecular_function | histone binding |
D | 0045815 | biological_process | transcription initiation-coupled chromatin remodeling |
D | 0140665 | molecular_function | ATP-dependent H3-H4 histone complex chaperone activity |
E | 0000785 | cellular_component | chromatin |
E | 0003682 | molecular_function | chromatin binding |
E | 0005524 | molecular_function | ATP binding |
E | 0005634 | cellular_component | nucleus |
E | 0005694 | cellular_component | chromosome |
E | 0006334 | biological_process | nucleosome assembly |
E | 0006337 | biological_process | nucleosome disassembly |
E | 0006338 | biological_process | chromatin remodeling |
E | 0016787 | molecular_function | hydrolase activity |
E | 0016887 | molecular_function | ATP hydrolysis activity |
E | 0042393 | molecular_function | histone binding |
E | 0045815 | biological_process | transcription initiation-coupled chromatin remodeling |
E | 0140665 | molecular_function | ATP-dependent H3-H4 histone complex chaperone activity |
F | 0000785 | cellular_component | chromatin |
F | 0003682 | molecular_function | chromatin binding |
F | 0005524 | molecular_function | ATP binding |
F | 0005634 | cellular_component | nucleus |
F | 0005694 | cellular_component | chromosome |
F | 0006334 | biological_process | nucleosome assembly |
F | 0006337 | biological_process | nucleosome disassembly |
F | 0006338 | biological_process | chromatin remodeling |
F | 0016787 | molecular_function | hydrolase activity |
F | 0016887 | molecular_function | ATP hydrolysis activity |
F | 0042393 | molecular_function | histone binding |
F | 0045815 | biological_process | transcription initiation-coupled chromatin remodeling |
F | 0140665 | molecular_function | ATP-dependent H3-H4 histone complex chaperone activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 11 |
Details | binding site for residue ADP A 1201 |
Chain | Residue |
A | SER267 |
A | ILE447 |
A | GLY476 |
A | GLY269 |
A | PRO309 |
A | GLY310 |
A | THR311 |
A | GLY312 |
A | LYS313 |
A | THR314 |
A | LEU315 |
site_id | AC2 |
Number of Residues | 13 |
Details | binding site for residue ATP B 1201 |
Chain | Residue |
A | ARG426 |
A | ARG429 |
B | GLY269 |
B | PRO309 |
B | GLY310 |
B | THR311 |
B | GLY312 |
B | LYS313 |
B | THR314 |
B | LEU315 |
B | ILE447 |
B | HIS451 |
B | GLY476 |
site_id | AC3 |
Number of Residues | 14 |
Details | binding site for Di-peptide ATP C 1201 and GLY C 310 |
Chain | Residue |
B | ARG426 |
B | ARG429 |
C | GLY269 |
C | PRO308 |
C | PRO309 |
C | THR311 |
C | GLY312 |
C | LYS313 |
C | THR314 |
C | ASN415 |
C | ILE447 |
C | HIS451 |
C | GLY476 |
C | ALA477 |
site_id | AC4 |
Number of Residues | 19 |
Details | binding site for Di-peptide ATP C 1201 and LYS C 313 |
Chain | Residue |
B | ARG426 |
B | ARG429 |
C | GLY269 |
C | GLY307 |
C | PRO308 |
C | PRO309 |
C | GLY310 |
C | THR311 |
C | GLY312 |
C | THR314 |
C | LEU315 |
C | MET316 |
C | THR414 |
C | ASN415 |
C | PHE436 |
C | ILE447 |
C | HIS451 |
C | GLY476 |
C | ALA477 |
site_id | AC5 |
Number of Residues | 20 |
Details | binding site for Di-peptide ATP C 1201 and ILE C 447 |
Chain | Residue |
B | ARG426 |
B | ARG429 |
C | GLY269 |
C | PRO309 |
C | GLY310 |
C | THR311 |
C | GLY312 |
C | LYS313 |
C | THR314 |
C | ASN415 |
C | ALA443 |
C | ARG444 |
C | LYS445 |
C | LYS446 |
C | ILE448 |
C | GLU449 |
C | HIS451 |
C | GLY476 |
C | ALA477 |
C | LEU479 |
site_id | AC6 |
Number of Residues | 14 |
Details | binding site for Di-peptide ATP C 1201 and GLY C 476 |
Chain | Residue |
B | ARG426 |
B | ARG429 |
C | GLY269 |
C | PRO309 |
C | GLY310 |
C | THR311 |
C | GLY312 |
C | LYS313 |
C | THR314 |
C | ASN415 |
C | ILE447 |
C | HIS451 |
C | GLY475 |
C | ALA477 |
site_id | AC7 |
Number of Residues | 15 |
Details | binding site for Di-peptide ATP D 1201 and LYS D 313 |
Chain | Residue |
D | THR314 |
D | LEU315 |
D | MET316 |
D | ASN415 |
D | ILE447 |
D | HIS451 |
D | GLY476 |
C | ARG426 |
C | ARG429 |
D | GLY307 |
D | PRO308 |
D | PRO309 |
D | GLY310 |
D | THR311 |
D | GLY312 |
site_id | AC8 |
Number of Residues | 17 |
Details | binding site for Di-peptide ATP D 1201 and ILE D 447 |
Chain | Residue |
C | ARG426 |
C | ARG429 |
D | PRO309 |
D | GLY310 |
D | THR311 |
D | GLY312 |
D | LYS313 |
D | THR314 |
D | ASN415 |
D | ALA443 |
D | LYS445 |
D | LYS446 |
D | ILE448 |
D | GLU449 |
D | ILE450 |
D | HIS451 |
D | GLY476 |
site_id | AC9 |
Number of Residues | 15 |
Details | binding site for Di-peptide ATP D 1201 and HIS D 451 |
Chain | Residue |
C | ARG426 |
C | ARG429 |
D | PRO309 |
D | GLY310 |
D | THR311 |
D | GLY312 |
D | LYS313 |
D | THR314 |
D | ASN415 |
D | ILE447 |
D | GLU449 |
D | ILE450 |
D | THR452 |
D | GLY476 |
D | ARG480 |
site_id | AD1 |
Number of Residues | 13 |
Details | binding site for Di-peptide ATP D 1201 and GLY D 310 |
Chain | Residue |
C | ARG426 |
C | ARG429 |
D | PRO308 |
D | PRO309 |
D | THR311 |
D | GLY312 |
D | LYS313 |
D | THR314 |
D | ASN415 |
D | ILE447 |
D | HIS451 |
D | GLY476 |
D | ALA477 |
site_id | AD2 |
Number of Residues | 20 |
Details | binding site for Di-peptide ATP E 1201 and LYS E 313 |
Chain | Residue |
D | ARG426 |
D | ARG429 |
E | GLY269 |
E | PHE305 |
E | HIS306 |
E | GLY307 |
E | PRO308 |
E | PRO309 |
E | GLY310 |
E | THR311 |
E | GLY312 |
E | THR314 |
E | MET316 |
E | ALA317 |
E | THR414 |
E | ASN415 |
E | PHE436 |
E | ILE447 |
E | HIS451 |
E | GLY476 |
site_id | AD3 |
Number of Residues | 20 |
Details | binding site for Di-peptide ATP E 1201 and ILE E 447 |
Chain | Residue |
D | ARG426 |
D | ARG429 |
E | GLY269 |
E | PRO308 |
E | PRO309 |
E | GLY310 |
E | THR311 |
E | GLY312 |
E | LYS313 |
E | THR314 |
E | ASN415 |
E | ALA443 |
E | ARG444 |
E | LYS445 |
E | LYS446 |
E | ILE448 |
E | GLU449 |
E | HIS451 |
E | GLY476 |
E | LEU479 |
site_id | AD4 |
Number of Residues | 18 |
Details | binding site for Di-peptide ATP E 1201 and HIS E 451 |
Chain | Residue |
D | ARG426 |
D | ARG429 |
E | GLY269 |
E | PRO308 |
E | PRO309 |
E | GLY310 |
E | THR311 |
E | GLY312 |
E | LYS313 |
E | THR314 |
E | ASN415 |
E | ILE447 |
E | GLU449 |
E | ILE450 |
E | THR452 |
E | ARG453 |
E | GLY476 |
E | ARG480 |
site_id | AD5 |
Number of Residues | 14 |
Details | binding site for Di-peptide ATP E 1201 and GLY E 310 |
Chain | Residue |
D | ARG426 |
D | ARG429 |
E | GLY269 |
E | PRO308 |
E | PRO309 |
E | THR311 |
E | GLY312 |
E | LYS313 |
E | THR314 |
E | ASN415 |
E | ILE447 |
E | HIS451 |
E | GLY476 |
E | ALA477 |
site_id | AD6 |
Number of Residues | 20 |
Details | binding site for Di-peptide ATP F 1201 and LYS F 313 |
Chain | Residue |
E | ARG426 |
E | ARG429 |
F | GLY269 |
F | HIS306 |
F | GLY307 |
F | PRO308 |
F | PRO309 |
F | GLY310 |
F | THR311 |
F | GLY312 |
F | THR314 |
F | LEU315 |
F | MET316 |
F | ALA317 |
F | THR414 |
F | ASN415 |
F | PHE436 |
F | ILE447 |
F | HIS451 |
F | GLY476 |
site_id | AD7 |
Number of Residues | 18 |
Details | binding site for Di-peptide ATP F 1201 and ILE F 447 |
Chain | Residue |
E | ARG426 |
E | ARG429 |
F | GLY269 |
F | PRO308 |
F | PRO309 |
F | GLY310 |
F | THR311 |
F | GLY312 |
F | LYS313 |
F | THR314 |
F | ALA443 |
F | LYS445 |
F | LYS446 |
F | ILE448 |
F | GLU449 |
F | ILE450 |
F | HIS451 |
F | GLY476 |
site_id | AD8 |
Number of Residues | 16 |
Details | binding site for Di-peptide ATP F 1201 and HIS F 451 |
Chain | Residue |
E | ARG426 |
E | ARG429 |
F | GLY269 |
F | PRO308 |
F | PRO309 |
F | GLY310 |
F | THR311 |
F | GLY312 |
F | LYS313 |
F | THR314 |
F | ILE447 |
F | GLU449 |
F | ILE450 |
F | THR452 |
F | GLY476 |
F | ARG480 |
site_id | AD9 |
Number of Residues | 13 |
Details | binding site for Di-peptide ATP F 1201 and GLY F 310 |
Chain | Residue |
E | ARG426 |
E | ARG429 |
F | GLY269 |
F | PRO308 |
F | PRO309 |
F | THR311 |
F | GLY312 |
F | LYS313 |
F | THR314 |
F | ILE447 |
F | HIS451 |
F | GLY476 |
F | ALA477 |
Functional Information from PROSITE/UniProt
site_id | PS00674 |
Number of Residues | 19 |
Details | AAA AAA-protein family signature. ViIIgATNrpdaVDpALr.R |
Chain | Residue | Details |
A | VAL408-ARG426 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 6 |
Details | BINDING: BINDING => ECO:0000269|PubMed:31848341, ECO:0007744|PDB:6JQ0 |
Chain | Residue | Details |
A | PRO309 | |
B | PRO309 | |
C | PRO309 | |
D | PRO309 | |
E | PRO309 | |
F | PRO309 |