6JP1
An X-ray structure of met sperm whale F43Y/T67R myoglobin with Tyr-heme double cross-links
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0004601 | molecular_function | peroxidase activity |
| A | 0005344 | molecular_function | oxygen carrier activity |
| A | 0015671 | biological_process | oxygen transport |
| A | 0016491 | molecular_function | oxidoreductase activity |
| A | 0016528 | cellular_component | sarcoplasm |
| A | 0019430 | biological_process | removal of superoxide radicals |
| A | 0019825 | molecular_function | oxygen binding |
| A | 0020037 | molecular_function | heme binding |
| A | 0046872 | molecular_function | metal ion binding |
| A | 0070062 | cellular_component | extracellular exosome |
| A | 0098809 | molecular_function | nitrite reductase activity |
| B | 0004601 | molecular_function | peroxidase activity |
| B | 0005344 | molecular_function | oxygen carrier activity |
| B | 0015671 | biological_process | oxygen transport |
| B | 0016491 | molecular_function | oxidoreductase activity |
| B | 0016528 | cellular_component | sarcoplasm |
| B | 0019430 | biological_process | removal of superoxide radicals |
| B | 0019825 | molecular_function | oxygen binding |
| B | 0020037 | molecular_function | heme binding |
| B | 0046872 | molecular_function | metal ion binding |
| B | 0070062 | cellular_component | extracellular exosome |
| B | 0098809 | molecular_function | nitrite reductase activity |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 19 |
| Details | binding site for residue HEM A 201 |
| Chain | Residue |
| A | TYR43 |
| A | HIS97 |
| A | ILE99 |
| A | TYR103 |
| A | PHE138 |
| A | HOH313 |
| A | HOH323 |
| A | HOH324 |
| A | HOH358 |
| A | HOH359 |
| A | HOH362 |
| A | ARG45 |
| A | HIS64 |
| A | ARG67 |
| A | VAL68 |
| A | ALA71 |
| A | LEU89 |
| A | SER92 |
| A | HIS93 |
| site_id | AC2 |
| Number of Residues | 25 |
| Details | binding site for Di-peptide HEM B 1001 and TYR B 43 |
| Chain | Residue |
| B | PHE33 |
| B | THR39 |
| B | LEU40 |
| B | GLU41 |
| B | LYS42 |
| B | ASP44 |
| B | ARG45 |
| B | PHE46 |
| B | LYS47 |
| B | HIS64 |
| B | ARG67 |
| B | VAL68 |
| B | LEU89 |
| B | SER92 |
| B | HIS93 |
| B | HIS97 |
| B | ILE99 |
| B | TYR103 |
| B | LEU104 |
| B | PHE138 |
| B | HOH1107 |
| B | HOH1112 |
| B | HOH1117 |
| B | HOH1143 |
| B | HOH1149 |
| site_id | AC3 |
| Number of Residues | 25 |
| Details | binding site for Di-peptide HEM B 1001 and TYR B 43 |
| Chain | Residue |
| B | PHE33 |
| B | THR39 |
| B | LEU40 |
| B | GLU41 |
| B | LYS42 |
| B | ASP44 |
| B | ARG45 |
| B | PHE46 |
| B | LYS47 |
| B | HIS64 |
| B | ARG67 |
| B | VAL68 |
| B | LEU89 |
| B | SER92 |
| B | HIS93 |
| B | HIS97 |
| B | ILE99 |
| B | TYR103 |
| B | LEU104 |
| B | PHE138 |
| B | HOH1107 |
| B | HOH1112 |
| B | HOH1117 |
| B | HOH1143 |
| B | HOH1149 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 292 |
| Details | Domain: {"description":"Globin","evidences":[{"source":"PROSITE-ProRule","id":"PRU00238","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 2 |
| Details | Binding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU00238","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"7463482","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1MBO","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 2 |
| Details | Binding site: {"description":"proximal binding residue","evidences":[{"source":"PROSITE-ProRule","id":"PRU00238","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"845959","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"4MBN","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5MBN","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"Q9QZ76","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"UniProtKB","id":"P04247","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
